RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 JCADQ9P266 1359 aa12.45□□□□□ -0.42
PFDN6-205ENST00000395134 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
PFDN6-205ENST00000395134 ATF3P18847 181 aa12.45□□□□□ -0.42
PFDN6-205ENST00000395134 LRRN4Q8WUT4 740 aa12.45□□□□□ -0.42
PFDN6-205ENST00000395134 PPLO60437 1756 aa12.45□□□□□ -0.42
PFDN6-205ENST00000395134 PPM1GO15355 546 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-205ENST00000395134 KDM4AO75164 1064 aa12.44□□□□□ -0.42
PFDN6-205ENST00000395134 MARSP56192 900 aaKnown RBP12.44□□□□□ -0.42
PFDN6-205ENST00000395134 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-205ENST00000395134 NOVA2Q9UNW9 492 aaKnown RBP12.44□□□□□ -0.42
PFDN6-205ENST00000395134 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
PFDN6-205ENST00000395134 METP08581 1390 aa12.43□□□□□ -0.42
PFDN6-205ENST00000395134 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
PFDN6-205ENST00000395134 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
PFDN6-205ENST00000395134 FDX1P10109 184 aa12.43□□□□□ -0.42
PFDN6-205ENST00000395134 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
PFDN6-205ENST00000395134 PLCG2P16885 1265 aa12.42□□□□□ -0.42
PFDN6-205ENST00000395134 VAMP1P23763 118 aa12.42□□□□□ -0.42
PFDN6-205ENST00000395134 FOSBP53539 338 aa12.42□□□□□ -0.42
PFDN6-205ENST00000395134 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
PFDN6-205ENST00000395134 USP46P62068 366 aa12.42□□□□□ -0.42
PFDN6-205ENST00000395134 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
PFDN6-205ENST00000395134 EPS8L1Q8TE68 723 aa12.42□□□□□ -0.42
PFDN6-205ENST00000395134 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
PFDN6-205ENST00000395134 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
PFDN6-205ENST00000395134 PNMA1Q8ND90 353 aa12.41□□□□□ -0.42
PFDN6-205ENST00000395134 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
PFDN6-205ENST00000395134 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
PFDN6-205ENST00000395134 EP400Q96L91 3159 aa12.4□□□□□ -0.42
PFDN6-205ENST00000395134 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
PFDN6-205ENST00000395134 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
PFDN6-205ENST00000395134 SPATA32Q96LK8 384 aa12.4□□□□□ -0.42
PFDN6-205ENST00000395134 MST1RQ04912 1400 aa12.39□□□□□ -0.43
PFDN6-205ENST00000395134 HOXA2O43364 376 aa12.39□□□□□ -0.43
PFDN6-205ENST00000395134 DNAJB2P25686 324 aa12.39□□□□□ -0.43
PFDN6-205ENST00000395134 DDX17Q92841 729 aaKnown RBP12.39□□□□□ -0.43
PFDN6-205ENST00000395134 HFM1A2PYH4 1435 aa12.38□□□□□ -0.43
PFDN6-205ENST00000395134 DCCP43146 1447 aa12.38□□□□□ -0.43
PFDN6-205ENST00000395134 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
PFDN6-205ENST00000395134 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
PFDN6-205ENST00000395134 ZC3H6P61129 1189 aaKnown RBP12.38□□□□□ -0.43
PFDN6-205ENST00000395134 NPAS4Q8IUM7 802 aa12.38□□□□□ -0.43
PFDN6-205ENST00000395134 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
PFDN6-205ENST00000395134 PCDHGC3Q9UN70 934 aa12.38□□□□□ -0.43
PFDN6-205ENST00000395134 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
PFDN6-205ENST00000395134 ANKRD33BA6NCL7 494 aa12.37□□□□□ -0.43
PFDN6-205ENST00000395134 TSC1Q92574 1164 aa12.37□□□□□ -0.43
PFDN6-205ENST00000395134 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
PFDN6-205ENST00000395134 SERPINB4P48594 390 aa12.36□□□□□ -0.43
PFDN6-205ENST00000395134 MTMR2Q13614 643 aa12.36□□□□□ -0.43
PFDN6-205ENST00000395134 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
PFDN6-205ENST00000395134 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
PFDN6-205ENST00000395134 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
PFDN6-205ENST00000395134 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
PFDN6-205ENST00000395134 UBXN4Q92575 508 aa12.35□□□□□ -0.43
PFDN6-205ENST00000395134 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
PFDN6-205ENST00000395134 TMEM134Q9H6X4 195 aa12.35□□□□□ -0.43
PFDN6-205ENST00000395134 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
PFDN6-205ENST00000395134 SPATA31A6Q5VVP1 1343 aa12.35□□□□□ -0.43
PFDN6-205ENST00000395134 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
PFDN6-205ENST00000395134 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
PFDN6-205ENST00000395134 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
PFDN6-205ENST00000395134 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 CFAP99D6REC4 459 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 GCGRP47871 477 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 ZNF454Q8N9F8 522 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
PFDN6-205ENST00000395134 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
PFDN6-205ENST00000395134 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
PFDN6-205ENST00000395134 NR6A1Q15406 480 aa12.31□□□□□ -0.44
PFDN6-205ENST00000395134 NUDT18Q6ZVK8 323 aa12.31□□□□□ -0.44
PFDN6-205ENST00000395134 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
PFDN6-205ENST00000395134 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
PFDN6-205ENST00000395134 AFF2P51816 1311 aa12.31□□□□□ -0.44
PFDN6-205ENST00000395134 PNPLA6Q8IY17 1366 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L15C9J2P7 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L13C9JLJ4 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L11C9JVI0 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L21D6R901 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
PFDN6-205ENST00000395134 GUCA2AQ02747 115 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L24Q0WX57 530 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
PFDN6-205ENST00000395134 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
PFDN6-205ENST00000395134 LAMC1P11047 1609 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 CCDC144AA2RUR9 1427 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms