RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
SIN3A-203ENST00000394949 MCM3P25205 808 aa20.15■□□□□ 0.82
SIN3A-203ENST00000394949 CNNM1Q9NRU3 951 aa20.15■□□□□ 0.82
SIN3A-203ENST00000394949 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
SIN3A-203ENST00000394949 FAM177BA6PVY3 158 aa20.15■□□□□ 0.82
SIN3A-203ENST00000394949 MAP9Q49MG5 647 aa20.15■□□□□ 0.82
SIN3A-203ENST00000394949 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
SIN3A-203ENST00000394949 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.82
SIN3A-203ENST00000394949 FAM107BQ9H098 131 aa20.14■□□□□ 0.82
SIN3A-203ENST00000394949 UBE2HP62256 183 aa20.14■□□□□ 0.81
SIN3A-203ENST00000394949 ZKSCAN5Q9Y2L8 839 aa20.14■□□□□ 0.81
SIN3A-203ENST00000394949 CRACR2AQ9BSW2 395 aa20.14■□□□□ 0.81
SIN3A-203ENST00000394949 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.81
SIN3A-203ENST00000394949 FERMT3Q86UX7 667 aa20.14■□□□□ 0.81
SIN3A-203ENST00000394949 PRDM11Q9NQV5 511 aa20.14■□□□□ 0.81
SIN3A-203ENST00000394949 BMS1Q14692 1282 aaKnown RBP20.13■□□□□ 0.81
SIN3A-203ENST00000394949 ZSCAN25Q6NSZ9 544 aa20.13■□□□□ 0.81
SIN3A-203ENST00000394949 C16orf45Q96MC5 204 aaPredicted RBP20.13■□□□□ 0.81
SIN3A-203ENST00000394949 HSP90AB3PQ58FF7 597 aa20.13■□□□□ 0.81
SIN3A-203ENST00000394949 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
SIN3A-203ENST00000394949 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 WASF1Q92558 559 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 ABCC5O15440 1437 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 IL16Q14005 1332 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 POTEB2H3BUK9 544 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 URI1O94763 535 aaPredicted RBP20.12■□□□□ 0.81
SIN3A-203ENST00000394949 ODF2Q5BJF6 829 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 CDK5RAP3Q96JB5 506 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
SIN3A-203ENST00000394949 CCAR1Q8IX12 1150 aaKnown RBP20.11■□□□□ 0.81
SIN3A-203ENST00000394949 SHTN1A0MZ66 631 aa20.11■□□□□ 0.81
SIN3A-203ENST00000394949 SKIDA1Q1XH10 827 aa20.11■□□□□ 0.81
SIN3A-203ENST00000394949 NACAP1Q9BZK3 213 aa20.11■□□□□ 0.81
SIN3A-203ENST00000394949 NUDT16Q96DE0 195 aaKnown RBP20.11■□□□□ 0.81
SIN3A-203ENST00000394949 KIF5CO60282 957 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 CASQ1P31415 396 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 PANK2Q9BZ23 570 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 GOLGA6L9A6NEM1 432 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
SIN3A-203ENST00000394949 STX6O43752 255 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 CCDC69A6NI79 296 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 JAKMIP3Q5VZ66 844 aa20.1■□□□□ 0.81
SIN3A-203ENST00000394949 PRPF40BQ6NWY9 871 aaKnown RBP20.1■□□□□ 0.81
SIN3A-203ENST00000394949 NUCB1Q02818 461 aa20.09■□□□□ 0.81
SIN3A-203ENST00000394949 CCDC171Q6TFL3 1326 aa20.09■□□□□ 0.81
SIN3A-203ENST00000394949 NSD2O96028 1365 aa20.09■□□□□ 0.81
SIN3A-203ENST00000394949 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
SIN3A-203ENST00000394949 ZHX1Q9UKY1 873 aaPredicted RBP20.09■□□□□ 0.81
SIN3A-203ENST00000394949 KDM4AO75164 1064 aa20.09■□□□□ 0.81
SIN3A-203ENST00000394949 TOP1P11387 765 aaKnown RBP20.09■□□□□ 0.81
SIN3A-203ENST00000394949 NOLC1Q14978 699 aaKnown RBP eCLIP20.09■□□□□ 0.81
SIN3A-203ENST00000394949 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
SIN3A-203ENST00000394949 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
SIN3A-203ENST00000394949 SMARCA5O60264 1052 aaPredicted RBP20.08■□□□□ 0.81
SIN3A-203ENST00000394949 HMGB1P09429 215 aaKnown RBP20.08■□□□□ 0.81
SIN3A-203ENST00000394949 IKQ13123 557 aaPredicted RBP20.08■□□□□ 0.81
SIN3A-203ENST00000394949 KRT222Q8N1A0 295 aa20.08■□□□□ 0.81
SIN3A-203ENST00000394949 CEP131Q9UPN4 1083 aa20.08■□□□□ 0.81
SIN3A-203ENST00000394949 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
SIN3A-203ENST00000394949 CCDC57Q2TAC2 916 aa20.08■□□□□ 0.81
SIN3A-203ENST00000394949 TTC22Q5TAA0 569 aa20.08■□□□□ 0.81
SIN3A-203ENST00000394949 STX1AQ16623 288 aa20.08■□□□□ 0.8
SIN3A-203ENST00000394949 SIL1Q9H173 461 aa20.08■□□□□ 0.8
SIN3A-203ENST00000394949 PTPRCP08575 1304 aa20.08■□□□□ 0.8
SIN3A-203ENST00000394949 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
SIN3A-203ENST00000394949 SMC5Q8IY18 1101 aa20.07■□□□□ 0.8
SIN3A-203ENST00000394949 CEP126Q9P2H0 1117 aa20.07■□□□□ 0.8
SIN3A-203ENST00000394949 ZRSR2Q15696 482 aaKnown RBP20.07■□□□□ 0.8
SIN3A-203ENST00000394949 DDX11Q96FC9 970 aa20.07■□□□□ 0.8
SIN3A-203ENST00000394949 GTPBP4Q9BZE4 634 aaKnown RBP20.07■□□□□ 0.8
SIN3A-203ENST00000394949 RBM27Q9P2N5 1060 aaKnown RBP20.07■□□□□ 0.8
SIN3A-203ENST00000394949 TIGD1Q96MW7 591 aa20.07■□□□□ 0.8
SIN3A-203ENST00000394949 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
SIN3A-203ENST00000394949 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 ZNF165P49910 485 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 FAM193AP78312 1265 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 ARHGAP45Q92619 1136 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 MTMR7Q9Y216 660 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 LRRFIP2Q9Y608 721 aaKnown RBP20.06■□□□□ 0.8
SIN3A-203ENST00000394949 CEP135Q66GS9 1140 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 KIAA1328Q86T90 577 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 ABCA10Q8WWZ4 1543 aa20.06■□□□□ 0.8
SIN3A-203ENST00000394949 RAB3GAP1Q15042 981 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 CKAP2LQ8IYA6 745 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 IMMTQ16891 758 aaKnown RBP20.05■□□□□ 0.8
SIN3A-203ENST00000394949 KIF4BQ2VIQ3 1234 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 KLHL34Q8N239 644 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 CCDC150Q8NCX0 1101 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 BTBD11A6QL63 1104 aa20.05■□□□□ 0.8
SIN3A-203ENST00000394949 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
SIN3A-203ENST00000394949 CDK13Q14004 1512 aaKnown RBP20.05■□□□□ 0.8
SIN3A-203ENST00000394949 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
SIN3A-203ENST00000394949 TUBB4AP04350 444 aa20.04■□□□□ 0.8
SIN3A-203ENST00000394949 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
SIN3A-203ENST00000394949 MYL6BP14649 208 aa20.03■□□□□ 0.8
SIN3A-203ENST00000394949 GIMAP7Q8NHV1 300 aa20.03■□□□□ 0.8
SIN3A-203ENST00000394949 GNAT3A8MTJ3 354 aa20.03■□□□□ 0.8
SIN3A-203ENST00000394949 HCLS1P14317 486 aaPredicted RBP20.03■□□□□ 0.8
SIN3A-203ENST00000394949 ANAPC15P60006 121 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms