RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SBNO1A3KN83 1393 aa12.23□□□□□ -0.45
UBE2D3-208ENST00000394803 FLT4P35916 1363 aa12.23□□□□□ -0.45
UBE2D3-208ENST00000394803 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
UBE2D3-208ENST00000394803 LRSAM1Q6UWE0 723 aa12.23□□□□□ -0.45
UBE2D3-208ENST00000394803 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
UBE2D3-208ENST00000394803 ACEP12821 1306 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 MLECQ14165 292 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 MCM10Q7L590 875 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 PDLIM2Q96JY6 352 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 ESYT1Q9BSJ8 1104 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 KDRP35968 1356 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 SMARCA5O60264 1052 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 NEK4P51957 841 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 CUL4AQ13619 759 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 CCDC39Q9UFE4 941 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 TNRQ92752 1358 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 PEAK1Q9H792 1746 aa12.22□□□□□ -0.45
UBE2D3-208ENST00000394803 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 PRR36Q9H6K5 1346 aa12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 LRRC37A3O60309 1634 aa12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 MX1P20591 662 aa12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 OTUD7AQ8TE49 926 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 STAP2Q9UGK3 403 aa12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 FAM208AQ9UK61 1670 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-208ENST00000394803 UBR1Q8IWV7 1749 aa12.21□□□□□ -0.46
UBE2D3-208ENST00000394803 APBB1O00213 710 aa12.21□□□□□ -0.46
UBE2D3-208ENST00000394803 ZNF500O60304 480 aaPredicted RBP12.21□□□□□ -0.46
UBE2D3-208ENST00000394803 SLC4A10Q6U841 1118 aa12.21□□□□□ -0.46
UBE2D3-208ENST00000394803 TMX3Q96JJ7 454 aa12.21□□□□□ -0.46
UBE2D3-208ENST00000394803 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
UBE2D3-208ENST00000394803 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
UBE2D3-208ENST00000394803 MAP7D2Q96T17 732 aa12.2□□□□□ -0.46
UBE2D3-208ENST00000394803 PTPRUQ92729 1446 aa12.2□□□□□ -0.46
UBE2D3-208ENST00000394803 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
UBE2D3-208ENST00000394803 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 BRD1O95696 1058 aa12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 WDR33Q9C0J8 1336 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 KIAA1211Q6ZU35 1233 aa12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 ZGPATQ8N5A5 531 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 XRN1Q8IZH2 1706 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-208ENST00000394803 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 LETM1O95202 739 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 GPT2Q8TD30 523 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 RBSNQ9H1K0 784 aa12.18□□□□□ -0.46
UBE2D3-208ENST00000394803 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 CHMLP26374 656 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 FLIIQ13045 1269 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 FKBP5Q13451 457 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 MTERF4Q7Z6M4 381 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 TSPY26PQ9H489 355 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 ANO2Q9NQ90 1003 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 ZKSCAN5Q9Y2L8 839 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 ZDHHC9Q9Y397 364 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 PKP1Q13835 747 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 UVSSAQ2YD98 709 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 HSP90AB4PQ58FF6 505 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 ATP6V1DQ9Y5K8 247 aa12.17□□□□□ -0.46
UBE2D3-208ENST00000394803 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
UBE2D3-208ENST00000394803 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
UBE2D3-208ENST00000394803 AMPHP49418 695 aa12.16□□□□□ -0.46
UBE2D3-208ENST00000394803 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 RILPL2Q969X0 211 aa12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 EXOC6BQ9Y2D4 811 aa12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 G2E3Q7L622 706 aa12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
UBE2D3-208ENST00000394803 DIP2AQ14689 1571 aa12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 USP54Q70EL1 1684 aa12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 SYCE3A1L190 88 aa12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 F6X3S4 739 aa12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-208ENST00000394803 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 HSPA4P34932 840 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 SSH3Q8TE77 659 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 HOXB7P09629 217 aa12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-208ENST00000394803 RUFY2Q8WXA3 655 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms