RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 TOM1O60784 492 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 RAB11FIP3O75154 756 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 MARCH6O60337 910 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 MCM2P49736 904 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 GLRX3O76003 335 aaKnown RBP12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 GPTP24298 496 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 KIAA2012Q0VF49 1180 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 ANKRD13DQ6ZTN6 518 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
MTHFD2-201ENST00000394053 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 GNL3LQ9NVN8 582 aaKnown RBP12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
MTHFD2-201ENST00000394053 METTL24Q5JXM2 366 aa12.77□□□□□ -0.36
MTHFD2-201ENST00000394053 BICD2Q8TD16 824 aa12.77□□□□□ -0.36
MTHFD2-201ENST00000394053 DDX17Q92841 729 aaKnown RBP12.77□□□□□ -0.36
MTHFD2-201ENST00000394053 CYP46A1Q9Y6A2 500 aa12.77□□□□□ -0.36
MTHFD2-201ENST00000394053 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
MTHFD2-201ENST00000394053 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
MTHFD2-201ENST00000394053 TPM4P67936 248 aa12.77□□□□□ -0.37
MTHFD2-201ENST00000394053 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
MTHFD2-201ENST00000394053 VPS53Q5VIR6 699 aa12.77□□□□□ -0.37
MTHFD2-201ENST00000394053 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 XAGE3Q8WTP9 111 aa12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 HECW2Q9P2P5 1572 aa12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 HDAC1Q13547 482 aaPredicted RBP12.76□□□□□ -0.37
MTHFD2-201ENST00000394053 K7ELQ4 463 aaPredicted RBP12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 IL2RBP14784 551 aa12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 MTMR7Q9Y216 660 aa12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 SBNO1A3KN83 1393 aa12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
MTHFD2-201ENST00000394053 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 KDM4AO75164 1064 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 ZPR1O75312 459 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 SART3Q15020 963 aaKnown RBP12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 CLSTN1O94985 981 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 STK11IPQ8N1F8 1099 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 EFCAB6Q5THR3 1501 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 BECN2A8MW95 431 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 STK3Q13188 491 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 ERVK-7P63135 1459 aa12.74□□□□□ -0.37
MTHFD2-201ENST00000394053 JAKMIP1Q96N16 626 aaKnown RBP12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 ABCF2Q9UG63 623 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 PDCP20941 246 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 KSR2Q6VAB6 950 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 AKAP2Q9Y2D5 859 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 ANKRD44Q8N8A2 993 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
MTHFD2-201ENST00000394053 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 ZSCAN25Q6NSZ9 544 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 ECHDC1Q9NTX5 307 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 MYOM2P54296 1465 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 ARAP3Q8WWN8 1544 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 GOLGA6L19H0YKK7 550 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 DDB1Q16531 1140 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
MTHFD2-201ENST00000394053 CHL1O00533 1208 aa12.71□□□□□ -0.37
MTHFD2-201ENST00000394053 NUCB1Q02818 461 aa12.71□□□□□ -0.37
MTHFD2-201ENST00000394053 LDHAL6AQ6ZMR3 332 aa12.71□□□□□ -0.37
MTHFD2-201ENST00000394053 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms