RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 COL14A1Q05707 1796 aaKnown RBP25.03■■□□□ 1.6
RAB5C-202ENST00000393860 CYP27B1O15528 508 aa25.03■■□□□ 1.6
RAB5C-202ENST00000393860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.03■■□□□ 1.6
RAB5C-202ENST00000393860 USP35Q9P2H5 1018 aa25.03■■□□□ 1.6
RAB5C-202ENST00000393860 UBAP1LF5GYI3 381 aa25.02■■□□□ 1.6
RAB5C-202ENST00000393860 EIF4A1P60842 406 aaKnown RBP25.02■■□□□ 1.6
RAB5C-202ENST00000393860 IFNL2Q8IZJ0 200 aa25.02■■□□□ 1.6
RAB5C-202ENST00000393860 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
RAB5C-202ENST00000393860 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
RAB5C-202ENST00000393860 G2E3Q7L622 706 aa25.02■■□□□ 1.6
RAB5C-202ENST00000393860 API5Q9BZZ5 524 aaKnown RBP25.02■■□□□ 1.6
RAB5C-202ENST00000393860 ABCC4O15439 1325 aa25.02■■□□□ 1.6
RAB5C-202ENST00000393860 RGS12O14924 1447 aa25■■□□□ 1.59
RAB5C-202ENST00000393860 ADAMTS2O95450 1211 aa24.99■■□□□ 1.59
RAB5C-202ENST00000393860 AAMPQ13685 434 aa24.99■■□□□ 1.59
RAB5C-202ENST00000393860 STK31Q9BXU1 1019 aa24.98■■□□□ 1.59
RAB5C-202ENST00000393860 IL2RBP14784 551 aa24.98■■□□□ 1.59
RAB5C-202ENST00000393860 CCDC30Q5VVM6 783 aa24.98■■□□□ 1.59
RAB5C-202ENST00000393860 NUTM2BA6NNL0 878 aaPredicted RBP24.97■■□□□ 1.59
RAB5C-202ENST00000393860 NUTM2EB1AL46 878 aaPredicted RBP24.97■■□□□ 1.59
RAB5C-202ENST00000393860 HDGFL1Q5TGJ6 251 aa24.97■■□□□ 1.59
RAB5C-202ENST00000393860 NUTM2AQ8IVF1 878 aaPredicted RBP24.97■■□□□ 1.59
RAB5C-202ENST00000393860 ZCRB1Q8TBF4 217 aaKnown RBP24.97■■□□□ 1.59
RAB5C-202ENST00000393860 PLEKHG2Q9H7P9 1386 aa24.97■■□□□ 1.59
RAB5C-202ENST00000393860 EIF2S2P20042 333 aaKnown RBP24.96■■□□□ 1.59
RAB5C-202ENST00000393860 SLC52A2Q9HAB3 445 aa24.96■■□□□ 1.59
RAB5C-202ENST00000393860 ZBTB40Q9NUA8 1239 aa24.96■■□□□ 1.59
RAB5C-202ENST00000393860 SHANK3Q9BYB0 1731 aa24.95■■□□□ 1.59
RAB5C-202ENST00000393860 PTPRCP08575 1304 aa24.95■■□□□ 1.58
RAB5C-202ENST00000393860 SLC39A6Q13433 755 aa24.95■■□□□ 1.58
RAB5C-202ENST00000393860 NFATC2IPQ8NCF5 419 aa24.95■■□□□ 1.58
RAB5C-202ENST00000393860 PLCH1Q4KWH8 1693 aa24.95■■□□□ 1.58
RAB5C-202ENST00000393860 DCAF5Q96JK2 942 aa24.94■■□□□ 1.58
RAB5C-202ENST00000393860 PCDH11XQ9BZA7 1347 aa24.94■■□□□ 1.58
RAB5C-202ENST00000393860 PCDH11YQ9BZA8 1340 aa24.94■■□□□ 1.58
RAB5C-202ENST00000393860 SOS1Q07889 1333 aaPredicted RBP24.93■■□□□ 1.58
RAB5C-202ENST00000393860 F6X3S4 739 aa24.92■■□□□ 1.58
RAB5C-202ENST00000393860 ZBTB7BO15156 539 aaPredicted RBP24.92■■□□□ 1.58
RAB5C-202ENST00000393860 DDX54Q8TDD1 881 aaKnown RBP24.92■■□□□ 1.58
RAB5C-202ENST00000393860 C1orf115Q9H7X2 142 aa24.92■■□□□ 1.58
RAB5C-202ENST00000393860 PRAMEF22A3QJZ6 481 aa24.92■■□□□ 1.58
RAB5C-202ENST00000393860 MRC1P22897 1456 aa24.91■■□□□ 1.58
RAB5C-202ENST00000393860 HSP90AB1P08238 724 aaKnown RBP24.91■■□□□ 1.58
RAB5C-202ENST00000393860 FLIIQ13045 1269 aa24.9■■□□□ 1.58
RAB5C-202ENST00000393860 CABP4P57796 275 aa24.89■■□□□ 1.58
RAB5C-202ENST00000393860 SLC4A10Q6U841 1118 aa24.89■■□□□ 1.58
RAB5C-202ENST00000393860 RWDD1Q9H446 243 aaPredicted RBP24.89■■□□□ 1.58
RAB5C-202ENST00000393860 CHPF2Q9P2E5 772 aa24.89■■□□□ 1.58
RAB5C-202ENST00000393860 HOXB7P09629 217 aa24.88■■□□□ 1.57
RAB5C-202ENST00000393860 FKBP5Q13451 457 aaPredicted RBP24.88■■□□□ 1.57
RAB5C-202ENST00000393860 INTS3Q68E01 1043 aaKnown RBP24.88■■□□□ 1.57
RAB5C-202ENST00000393860 ZNF790Q6PG37 636 aa24.88■■□□□ 1.57
RAB5C-202ENST00000393860 PHAXQ9H814 394 aaKnown RBP24.88■■□□□ 1.57
RAB5C-202ENST00000393860 GIGYF1O75420 1035 aaPredicted RBP24.88■■□□□ 1.57
RAB5C-202ENST00000393860 ANXA1P04083 346 aa24.88■■□□□ 1.57
RAB5C-202ENST00000393860 CACNA1FO60840 1977 aa24.87■■□□□ 1.57
RAB5C-202ENST00000393860 C5P01031 1676 aa24.87■■□□□ 1.57
RAB5C-202ENST00000393860 HEG1Q9ULI3 1381 aa24.87■■□□□ 1.57
RAB5C-202ENST00000393860 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
RAB5C-202ENST00000393860 RGS3P49796 1198 aa24.86■■□□□ 1.57
RAB5C-202ENST00000393860 CHMP4BQ9H444 224 aaKnown RBP24.83■■□□□ 1.57
RAB5C-202ENST00000393860 DISP2A7MBM2 1401 aa24.83■■□□□ 1.57
RAB5C-202ENST00000393860 TOGARAM1Q9Y4F4 1720 aa24.83■■□□□ 1.56
RAB5C-202ENST00000393860 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
RAB5C-202ENST00000393860 CERKQ8TCT0 537 aa24.82■■□□□ 1.56
RAB5C-202ENST00000393860 ZNF496Q96IT1 587 aaPredicted RBP24.82■■□□□ 1.56
RAB5C-202ENST00000393860 WNK3Q9BYP7 1800 aa24.82■■□□□ 1.56
RAB5C-202ENST00000393860 HDAC1Q13547 482 aaPredicted RBP24.82■■□□□ 1.56
RAB5C-202ENST00000393860 PROSER3Q2NL68 480 aa24.82■■□□□ 1.56
RAB5C-202ENST00000393860 RBM19Q9Y4C8 960 aaKnown RBP24.82■■□□□ 1.56
RAB5C-202ENST00000393860 MEIS3Q99687 375 aa24.81■■□□□ 1.56
RAB5C-202ENST00000393860 NKX1-1Q15270 411 aaPredicted RBP24.8■■□□□ 1.56
RAB5C-202ENST00000393860 PDZRN3Q9UPQ7 1066 aa24.8■■□□□ 1.56
RAB5C-202ENST00000393860 CCT4P50991 539 aaKnown RBP24.79■■□□□ 1.56
RAB5C-202ENST00000393860 DBF4Q9UBU7 674 aaPredicted RBP24.78■■□□□ 1.56
RAB5C-202ENST00000393860 ERVV-2B6SEH9 535 aa24.78■■□□□ 1.56
RAB5C-202ENST00000393860 GLI3P10071 1580 aa24.77■■□□□ 1.56
RAB5C-202ENST00000393860 SIRT2Q8IXJ6 389 aa24.76■■□□□ 1.55
RAB5C-202ENST00000393860 FMNL2Q96PY5 1086 aa24.76■■□□□ 1.55
RAB5C-202ENST00000393860 CHMP4AQ9BY43 222 aa24.76■■□□□ 1.55
RAB5C-202ENST00000393860 JCADQ9P266 1359 aa24.76■■□□□ 1.55
RAB5C-202ENST00000393860 N4BP2Q86UW6 1770 aaPredicted RBP24.76■■□□□ 1.55
RAB5C-202ENST00000393860 CCDC9Q9Y3X0 531 aaKnown RBP24.76■■□□□ 1.55
RAB5C-202ENST00000393860 SPATA31A1Q5TZJ5 1347 aa24.75■■□□□ 1.55
RAB5C-202ENST00000393860 NWD2Q9ULI1 1742 aa24.75■■□□□ 1.55
RAB5C-202ENST00000393860 SLIT2O94813 1529 aa24.75■■□□□ 1.55
RAB5C-202ENST00000393860 PAPPAQ13219 1627 aa24.75■■□□□ 1.55
RAB5C-202ENST00000393860 C8orf37Q96NL8 207 aa24.74■■□□□ 1.55
RAB5C-202ENST00000393860 USP16Q9Y5T5 823 aa24.74■■□□□ 1.55
RAB5C-202ENST00000393860 PXDNLA1KZ92 1463 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 PI4KAP2A4QPH2 592 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 SNRPA1P09661 255 aaKnown RBP24.73■■□□□ 1.55
RAB5C-202ENST00000393860 PIP4K2AP48426 406 aaPredicted RBP24.73■■□□□ 1.55
RAB5C-202ENST00000393860 PI4KAP1Q8N8J0 262 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 ATP10DQ9P241 1426 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 UBR2Q8IWV8 1755 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 EXOC5O00471 708 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 MYL6BP14649 208 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 PDIA6Q15084 440 aa24.73■■□□□ 1.55
RAB5C-202ENST00000393860 SMC5Q8IY18 1101 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms