RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 GNPATO15228 680 aa25.56■■□□□ 1.68
SNCB-202ENST00000393693 IGSF1Q8N6C5 1336 aa25.54■■□□□ 1.68
SNCB-202ENST00000393693 ATP10DQ9P241 1426 aa25.54■■□□□ 1.68
SNCB-202ENST00000393693 PANK3Q9H999 370 aa25.53■■□□□ 1.68
SNCB-202ENST00000393693 ZNF316A6NFI3 1004 aaPredicted RBP25.52■■□□□ 1.68
SNCB-202ENST00000393693 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
SNCB-202ENST00000393693 SLC4A9Q96Q91 983 aa25.51■■□□□ 1.67
SNCB-202ENST00000393693 RBM42Q9BTD8 480 aaKnown RBP25.49■■□□□ 1.67
SNCB-202ENST00000393693 KDRP35968 1356 aa25.48■■□□□ 1.67
SNCB-202ENST00000393693 EIF4G2P78344 907 aaKnown RBP eCLIP25.48■■□□□ 1.67
SNCB-202ENST00000393693 ERVV-2B6SEH9 535 aa25.47■■□□□ 1.67
SNCB-202ENST00000393693 MMP10P09238 476 aa25.47■■□□□ 1.67
SNCB-202ENST00000393693 ZNF526Q8TF50 670 aaPredicted RBP25.47■■□□□ 1.67
SNCB-202ENST00000393693 PLEKHO1Q53GL0 409 aaPredicted RBP25.46■■□□□ 1.67
SNCB-202ENST00000393693 ADCY9O60503 1353 aa25.45■■□□□ 1.67
SNCB-202ENST00000393693 TRAPPC3LQ5T215 181 aa25.45■■□□□ 1.66
SNCB-202ENST00000393693 ZNF530Q6P9A1 599 aaPredicted RBP25.45■■□□□ 1.66
SNCB-202ENST00000393693 AEBP1Q8IUX7 1158 aa25.45■■□□□ 1.66
SNCB-202ENST00000393693 DCAF5Q96JK2 942 aa25.45■■□□□ 1.66
SNCB-202ENST00000393693 GPBP1L1Q9HC44 474 aaPredicted RBP25.45■■□□□ 1.66
SNCB-202ENST00000393693 RTCBQ9Y3I0 505 aaKnown RBP25.45■■□□□ 1.66
SNCB-202ENST00000393693 KDM6AO15550 1401 aaPredicted RBP25.44■■□□□ 1.66
SNCB-202ENST00000393693 PLEKHG2Q9H7P9 1386 aa25.44■■□□□ 1.66
SNCB-202ENST00000393693 HSP90AB1P08238 724 aaKnown RBP25.43■■□□□ 1.66
SNCB-202ENST00000393693 CABP4P57796 275 aa25.42■■□□□ 1.66
SNCB-202ENST00000393693 MORC1Q86VD1 984 aa25.42■■□□□ 1.66
SNCB-202ENST00000393693 ARHGEF1Q92888 912 aaKnown RBP25.42■■□□□ 1.66
SNCB-202ENST00000393693 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
SNCB-202ENST00000393693 RC3H1Q5TC82 1133 aaKnown RBP25.4■■□□□ 1.66
SNCB-202ENST00000393693 MTHFSP49914 203 aa25.39■■□□□ 1.66
SNCB-202ENST00000393693 NLGN1Q8N2Q7 840 aa25.39■■□□□ 1.66
SNCB-202ENST00000393693 CNTNAP4Q9C0A0 1308 aa25.38■■□□□ 1.65
SNCB-202ENST00000393693 PTCD1O75127 700 aaKnown RBP25.38■■□□□ 1.65
SNCB-202ENST00000393693 RPS6KA4O75676 772 aa25.38■■□□□ 1.65
SNCB-202ENST00000393693 PXDNLA1KZ92 1463 aa25.38■■□□□ 1.65
SNCB-202ENST00000393693 CICQ96RK0 1608 aaPredicted RBP25.37■■□□□ 1.65
SNCB-202ENST00000393693 A0A0G2JLW4 131 aa25.37■■□□□ 1.65
SNCB-202ENST00000393693 GYS1P13807 737 aa25.37■■□□□ 1.65
SNCB-202ENST00000393693 SULT6B1Q6IMI4 303 aa25.37■■□□□ 1.65
SNCB-202ENST00000393693 RFC4P35249 363 aa25.36■■□□□ 1.65
SNCB-202ENST00000393693 C1orf141Q5JVX7 400 aa25.36■■□□□ 1.65
SNCB-202ENST00000393693 NFATC2IPQ8NCF5 419 aa25.36■■□□□ 1.65
SNCB-202ENST00000393693 ADRA2BP18089 450 aa25.35■■□□□ 1.65
SNCB-202ENST00000393693 TGFB2P61812 414 aa25.35■■□□□ 1.65
SNCB-202ENST00000393693 ZNF831Q5JPB2 1677 aa25.34■■□□□ 1.65
SNCB-202ENST00000393693 IL13P35225 146 aa25.34■■□□□ 1.65
SNCB-202ENST00000393693 BCS1LQ9Y276 419 aa25.34■■□□□ 1.65
SNCB-202ENST00000393693 COL5A3P25940 1745 aaPredicted RBP25.34■■□□□ 1.65
SNCB-202ENST00000393693 DPEP1P16444 411 aa25.33■■□□□ 1.65
SNCB-202ENST00000393693 C10orf71Q711Q0 1435 aa25.33■■□□□ 1.65
SNCB-202ENST00000393693 KIAA1551Q9HCM1 1747 aa25.33■■□□□ 1.65
SNCB-202ENST00000393693 KNSTRNQ9Y448 316 aa25.33■■□□□ 1.65
SNCB-202ENST00000393693 CEP350Q5VT06 3117 aa25.33■■□□□ 1.65
SNCB-202ENST00000393693 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
SNCB-202ENST00000393693 CRKLP46109 303 aaKnown RBP25.32■■□□□ 1.64
SNCB-202ENST00000393693 CCDC87Q9NVE4 849 aa25.32■■□□□ 1.64
SNCB-202ENST00000393693 SRP68Q9UHB9 627 aaKnown RBP25.31■■□□□ 1.64
SNCB-202ENST00000393693 PARP3Q9Y6F1 533 aa25.31■■□□□ 1.64
SNCB-202ENST00000393693 MYH14Q7Z406 1995 aaKnown RBP25.31■■□□□ 1.64
SNCB-202ENST00000393693 KIF13BQ9NQT8 1826 aa25.3■■□□□ 1.64
SNCB-202ENST00000393693 KIF3CO14782 793 aa25.3■■□□□ 1.64
SNCB-202ENST00000393693 C4AP0C0L4 1744 aa25.29■■□□□ 1.64
SNCB-202ENST00000393693 HSPA6P17066 643 aa25.28■■□□□ 1.64
SNCB-202ENST00000393693 ARHGAP27Q6ZUM4 889 aa25.28■■□□□ 1.64
SNCB-202ENST00000393693 FCHSD2O94868 740 aa25.27■■□□□ 1.64
SNCB-202ENST00000393693 FKBP8Q14318 412 aa25.27■■□□□ 1.64
SNCB-202ENST00000393693 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
SNCB-202ENST00000393693 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
SNCB-202ENST00000393693 KCNA3P22001 575 aa25.26■■□□□ 1.63
SNCB-202ENST00000393693 DDR1Q08345 913 aa25.25■■□□□ 1.63
SNCB-202ENST00000393693 AKAP4Q5JQC9 854 aa25.25■■□□□ 1.63
SNCB-202ENST00000393693 INTS5Q6P9B9 1019 aaKnown RBP25.25■■□□□ 1.63
SNCB-202ENST00000393693 USP42Q9H9J4 1324 aaKnown RBP25.24■■□□□ 1.63
SNCB-202ENST00000393693 DNAJC10Q8IXB1 793 aa25.24■■□□□ 1.63
SNCB-202ENST00000393693 TJP1Q07157 1748 aa25.23■■□□□ 1.63
SNCB-202ENST00000393693 HMOX1P09601 288 aa25.23■■□□□ 1.63
SNCB-202ENST00000393693 SLC52A2Q9HAB3 445 aa25.23■■□□□ 1.63
SNCB-202ENST00000393693 SLC39A6Q13433 755 aa25.22■■□□□ 1.63
SNCB-202ENST00000393693 KIF7Q2M1P5 1343 aa25.21■■□□□ 1.63
SNCB-202ENST00000393693 RNMTO43148 476 aaKnown RBP25.2■■□□□ 1.62
SNCB-202ENST00000393693 SCN11AQ9UI33 1791 aa25.2■■□□□ 1.62
SNCB-202ENST00000393693 PIM2Q9P1W9 311 aa25.19■■□□□ 1.62
SNCB-202ENST00000393693 TM4SF1P30408 202 aa25.18■■□□□ 1.62
SNCB-202ENST00000393693 CHRNA5P30532 468 aa25.18■■□□□ 1.62
SNCB-202ENST00000393693 MTHFSDQ2M296 383 aaKnown RBP25.18■■□□□ 1.62
SNCB-202ENST00000393693 USPL1Q5W0Q7 1092 aa25.18■■□□□ 1.62
SNCB-202ENST00000393693 NMRK2Q9NPI5 230 aa25.18■■□□□ 1.62
SNCB-202ENST00000393693 POLRMTO00411 1230 aaKnown RBP25.17■■□□□ 1.62
SNCB-202ENST00000393693 C9orf131Q5VYM1 1079 aa25.17■■□□□ 1.62
SNCB-202ENST00000393693 BRCA1P38398 1863 aaKnown RBP25.17■■□□□ 1.62
SNCB-202ENST00000393693 SOS1Q07889 1333 aaPredicted RBP25.16■■□□□ 1.62
SNCB-202ENST00000393693 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
SNCB-202ENST00000393693 DALRD3Q5D0E6 543 aaKnown RBP25.16■■□□□ 1.62
SNCB-202ENST00000393693 CC2D1BQ5T0F9 858 aaKnown RBP25.16■■□□□ 1.62
SNCB-202ENST00000393693 ADAMTS7Q9UKP4 1686 aa25.16■■□□□ 1.62
SNCB-202ENST00000393693 PER1O15534 1290 aaPredicted RBP25.15■■□□□ 1.62
SNCB-202ENST00000393693 ZPR1O75312 459 aa25.15■■□□□ 1.62
SNCB-202ENST00000393693 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
SNCB-202ENST00000393693 DIAPH1O60610 1272 aaKnown RBP25.13■■□□□ 1.61
SNCB-202ENST00000393693 TOMM70O94826 608 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms