RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 NFATC2IPQ8NCF5 419 aa31.04■■■□□ 2.56
HMGA2-202ENST00000393577 ZEB1P37275 1124 aaPredicted RBP31.03■■■□□ 2.56
HMGA2-202ENST00000393577 LINC00116Q8NCU8 138 aa31.03■■■□□ 2.56
HMGA2-202ENST00000393577 SLC16A10Q8TF71 515 aa31.03■■■□□ 2.56
HMGA2-202ENST00000393577 AK7Q96M32 723 aa31.03■■■□□ 2.56
HMGA2-202ENST00000393577 MSH5O43196 834 aa31.02■■■□□ 2.56
HMGA2-202ENST00000393577 ITPK1Q13572 414 aa31.02■■■□□ 2.56
HMGA2-202ENST00000393577 SGIP1Q9BQI5 828 aa31.02■■■□□ 2.56
HMGA2-202ENST00000393577 RBM42Q9BTD8 480 aaKnown RBP31.02■■■□□ 2.56
HMGA2-202ENST00000393577 LGR6Q9HBX8 967 aa31.02■■■□□ 2.56
HMGA2-202ENST00000393577 ADAMTS7Q9UKP4 1686 aa31.01■■■□□ 2.55
HMGA2-202ENST00000393577 RNMTO43148 476 aaKnown RBP31.01■■■□□ 2.55
HMGA2-202ENST00000393577 COL23A1Q86Y22 540 aaPredicted RBP31.01■■■□□ 2.55
HMGA2-202ENST00000393577 UBR3Q6ZT12 1888 aa31.01■■■□□ 2.55
HMGA2-202ENST00000393577 ZNF831Q5JPB2 1677 aa31■■■□□ 2.55
HMGA2-202ENST00000393577 U2AF1L5P0DN76 240 aaPredicted RBP31■■■□□ 2.55
HMGA2-202ENST00000393577 PRKAR2BP31323 418 aa31■■■□□ 2.55
HMGA2-202ENST00000393577 U2AF1Q01081 240 aaKnown RBP eCLIP31■■■□□ 2.558e-8■■□□□ 13.6
HMGA2-202ENST00000393577 RSPH6AQ9H0K4 717 aa31■■■□□ 2.55
HMGA2-202ENST00000393577 MRC1P22897 1456 aa31■■■□□ 2.55
HMGA2-202ENST00000393577 GAS2L2Q8NHY3 880 aa30.99■■■□□ 2.55
HMGA2-202ENST00000393577 SLC52A2Q9HAB3 445 aa30.99■■■□□ 2.55
HMGA2-202ENST00000393577 COL24A1Q17RW2 1714 aa30.98■■■□□ 2.55
HMGA2-202ENST00000393577 SLC4A9Q96Q91 983 aa30.98■■■□□ 2.55
HMGA2-202ENST00000393577 MAP3K5Q99683 1374 aa30.96■■■□□ 2.55
HMGA2-202ENST00000393577 AMIGO3Q86WK7 504 aa30.96■■■□□ 2.55
HMGA2-202ENST00000393577 COL5A3P25940 1745 aaPredicted RBP30.95■■■□□ 2.55
HMGA2-202ENST00000393577 PHF14O94880 888 aa30.95■■■□□ 2.55
HMGA2-202ENST00000393577 FLAD1Q8NFF5 587 aa30.95■■■□□ 2.55
HMGA2-202ENST00000393577 PHACTR3Q96KR7 559 aa30.95■■■□□ 2.55
HMGA2-202ENST00000393577 PTCD1O75127 700 aaKnown RBP30.94■■■□□ 2.54
HMGA2-202ENST00000393577 ARXQ96QS3 562 aa30.94■■■□□ 2.54
HMGA2-202ENST00000393577 RALBP1Q15311 655 aa30.93■■■□□ 2.54
HMGA2-202ENST00000393577 SMIM5Q71RC9 77 aa30.93■■■□□ 2.54
HMGA2-202ENST00000393577 GNAT3A8MTJ3 354 aa30.92■■■□□ 2.54
HMGA2-202ENST00000393577 GNPATO15228 680 aa30.92■■■□□ 2.54
HMGA2-202ENST00000393577 POLD1P28340 1107 aa30.92■■■□□ 2.54
HMGA2-202ENST00000393577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.91■■■□□ 2.54
HMGA2-202ENST00000393577 FCHSD2O94868 740 aa30.91■■■□□ 2.54
HMGA2-202ENST00000393577 SSFA2P28290 1259 aa30.9■■■□□ 2.54
HMGA2-202ENST00000393577 MSL1Q68DK7 614 aa30.9■■■□□ 2.54
HMGA2-202ENST00000393577 FHDC1Q9C0D6 1143 aaPredicted RBP30.9■■■□□ 2.54
HMGA2-202ENST00000393577 TJP1Q07157 1748 aa30.9■■■□□ 2.54
HMGA2-202ENST00000393577 SLC39A6Q13433 755 aa30.88■■■□□ 2.53
HMGA2-202ENST00000393577 CICQ96RK0 1608 aaPredicted RBP30.87■■■□□ 2.53
HMGA2-202ENST00000393577 IL17REQ8NFR9 667 aa30.87■■■□□ 2.53
HMGA2-202ENST00000393577 CNTNAP4Q9C0A0 1308 aa30.86■■■□□ 2.53
HMGA2-202ENST00000393577 SIPA1L3O60292 1781 aaPredicted RBP30.86■■■□□ 2.53
HMGA2-202ENST00000393577 MYH14Q7Z406 1995 aaKnown RBP30.86■■■□□ 2.53
HMGA2-202ENST00000393577 SYT17Q9BSW7 474 aa30.85■■■□□ 2.53
HMGA2-202ENST00000393577 KCPQ6ZWJ8 1503 aa30.84■■■□□ 2.53
HMGA2-202ENST00000393577 TEFQ10587 303 aa30.84■■■□□ 2.53
HMGA2-202ENST00000393577 RC3H1Q5TC82 1133 aaKnown RBP30.84■■■□□ 2.53
HMGA2-202ENST00000393577 RTCBQ9Y3I0 505 aaKnown RBP30.83■■■□□ 2.53
HMGA2-202ENST00000393577 UBR2Q8IWV8 1755 aa30.83■■■□□ 2.53
HMGA2-202ENST00000393577 MYBBP1AQ9BQG0 1328 aaKnown RBP30.82■■■□□ 2.52
HMGA2-202ENST00000393577 KLHL34Q8N239 644 aa30.82■■■□□ 2.52
HMGA2-202ENST00000393577 CEMIPQ8WUJ3 1361 aa30.81■■■□□ 2.52
HMGA2-202ENST00000393577 CRKLP46109 303 aaKnown RBP30.8■■■□□ 2.52
HMGA2-202ENST00000393577 DNAJC10Q8IXB1 793 aa30.79■■■□□ 2.52
HMGA2-202ENST00000393577 RPS6KA4O75676 772 aa30.78■■■□□ 2.52
HMGA2-202ENST00000393577 TRAPPC3LQ5T215 181 aa30.78■■■□□ 2.52
HMGA2-202ENST00000393577 TTC5Q8N0Z6 440 aa30.78■■■□□ 2.52
HMGA2-202ENST00000393577 NEFMP07197 916 aa30.77■■■□□ 2.52
HMGA2-202ENST00000393577 RTF1Q92541 710 aaKnown RBP30.77■■■□□ 2.52
HMGA2-202ENST00000393577 C4AP0C0L4 1744 aa30.76■■■□□ 2.52
HMGA2-202ENST00000393577 DLG5Q8TDM6 1919 aa30.76■■■□□ 2.51
HMGA2-202ENST00000393577 DCAF8L1A6NGE4 600 aa30.75■■■□□ 2.51
HMGA2-202ENST00000393577 ADRA2BP18089 450 aa30.75■■■□□ 2.51
HMGA2-202ENST00000393577 MCM10Q7L590 875 aa30.75■■■□□ 2.51
HMGA2-202ENST00000393577 PLEKHF1Q96S99 279 aa30.75■■■□□ 2.51
HMGA2-202ENST00000393577 ZNF790Q6PG37 636 aa30.74■■■□□ 2.51
HMGA2-202ENST00000393577 ARHGEF1Q92888 912 aaKnown RBP30.74■■■□□ 2.51
HMGA2-202ENST00000393577 VSIG10Q8N0Z9 540 aa30.73■■■□□ 2.51
HMGA2-202ENST00000393577 DCTN1Q14203 1278 aa30.72■■■□□ 2.51
HMGA2-202ENST00000393577 INTS5Q6P9B9 1019 aaKnown RBP30.72■■■□□ 2.51
HMGA2-202ENST00000393577 PRKRIP1Q9H875 184 aaPredicted RBP30.72■■■□□ 2.51
HMGA2-202ENST00000393577 HTATSF1O43719 755 aaKnown RBP30.71■■■□□ 2.51
HMGA2-202ENST00000393577 CYP19A1P11511 503 aaPredicted RBP30.71■■■□□ 2.51
HMGA2-202ENST00000393577 RFC4P35249 363 aa30.71■■■□□ 2.51
HMGA2-202ENST00000393577 ZNF496Q96IT1 587 aaPredicted RBP30.71■■■□□ 2.51
HMGA2-202ENST00000393577 PNNQ9H307 717 aaKnown RBP30.71■■■□□ 2.51
HMGA2-202ENST00000393577 CCDC87Q9NVE4 849 aa30.71■■■□□ 2.51
HMGA2-202ENST00000393577 MAPK8IP3Q9UPT6 1336 aa30.71■■■□□ 2.51
HMGA2-202ENST00000393577 BTBD11A6QL63 1104 aa30.7■■■□□ 2.51
HMGA2-202ENST00000393577 HEG1Q9ULI3 1381 aa30.68■■■□□ 2.5
HMGA2-202ENST00000393577 NLGN2Q8NFZ4 835 aa30.68■■■□□ 2.5
HMGA2-202ENST00000393577 KCNQ3O43525 872 aa30.67■■■□□ 2.5
HMGA2-202ENST00000393577 NFE2L2Q16236 605 aa30.67■■■□□ 2.5
HMGA2-202ENST00000393577 FMNL2Q96PY5 1086 aa30.66■■■□□ 2.5
HMGA2-202ENST00000393577 GYS1P13807 737 aa30.65■■■□□ 2.5
HMGA2-202ENST00000393577 ZBTB1Q9Y2K1 713 aa30.65■■■□□ 2.5
HMGA2-202ENST00000393577 SOS1Q07889 1333 aaPredicted RBP30.65■■■□□ 2.5
HMGA2-202ENST00000393577 ZNF316A6NFI3 1004 aaPredicted RBP30.64■■■□□ 2.5
HMGA2-202ENST00000393577 MMP10P09238 476 aa30.64■■■□□ 2.5
HMGA2-202ENST00000393577 SRP68Q9UHB9 627 aaKnown RBP30.64■■■□□ 2.5
HMGA2-202ENST00000393577 NLGN1Q8N2Q7 840 aa30.63■■■□□ 2.49
HMGA2-202ENST00000393577 STARD3NLO95772 234 aa30.62■■■□□ 2.49
HMGA2-202ENST00000393577 CD2APQ9Y5K6 639 aa30.62■■■□□ 2.49
HMGA2-202ENST00000393577 USP42Q9H9J4 1324 aaKnown RBP30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms