RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
SFXN3-202ENST00000393459 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
SFXN3-202ENST00000393459 G2E3Q7L622 706 aa17.6■□□□□ 0.41
SFXN3-202ENST00000393459 TERF2IPQ9NYB0 399 aa17.6■□□□□ 0.41
SFXN3-202ENST00000393459 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
SFXN3-202ENST00000393459 KIF3AQ9Y496 699 aa17.6■□□□□ 0.41
SFXN3-202ENST00000393459 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
SFXN3-202ENST00000393459 CEP85Q6P2H3 762 aa17.6■□□□□ 0.41
SFXN3-202ENST00000393459 C16orf45Q96MC5 204 aaPredicted RBP17.6■□□□□ 0.41
SFXN3-202ENST00000393459 CGNQ9P2M7 1197 aaKnown RBP17.6■□□□□ 0.41
SFXN3-202ENST00000393459 VPS37CA5D8V6 355 aaPredicted RBP17.59■□□□□ 0.41
SFXN3-202ENST00000393459 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
SFXN3-202ENST00000393459 PPFIA3O75145 1194 aa17.59■□□□□ 0.41
SFXN3-202ENST00000393459 GNAI1P63096 354 aa17.59■□□□□ 0.41
SFXN3-202ENST00000393459 ZNF771Q7L3S4 317 aaPredicted RBP17.59■□□□□ 0.41
SFXN3-202ENST00000393459 HDGFL2Q7Z4V5 671 aaPredicted RBP17.59■□□□□ 0.41
SFXN3-202ENST00000393459 ZMYM3Q14202 1370 aa17.59■□□□□ 0.41
SFXN3-202ENST00000393459 CDK19Q9BWU1 502 aa17.58■□□□□ 0.41
SFXN3-202ENST00000393459 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.41
SFXN3-202ENST00000393459 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.4
SFXN3-202ENST00000393459 RIOK3O14730 519 aaKnown RBP17.58■□□□□ 0.4
SFXN3-202ENST00000393459 MYRIPQ8NFW9 859 aa17.58■□□□□ 0.4
SFXN3-202ENST00000393459 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
SFXN3-202ENST00000393459 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
SFXN3-202ENST00000393459 TCEANC2Q96MN5 208 aa17.57■□□□□ 0.4
SFXN3-202ENST00000393459 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
SFXN3-202ENST00000393459 FOSBP53539 338 aa17.57■□□□□ 0.4
SFXN3-202ENST00000393459 SMAP1Q8IYB5 467 aaPredicted RBP17.57■□□□□ 0.4
SFXN3-202ENST00000393459 MBD3O95983 291 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 LRMPQ12912 555 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 MSH6P52701 1360 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
SFXN3-202ENST00000393459 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 AP5Z1O43299 807 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 FOXO3O43524 673 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 FCHSD2O94868 740 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 PDE1AP54750 535 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
SFXN3-202ENST00000393459 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
SFXN3-202ENST00000393459 ERICH4A6NGS2 130 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 HS1BP3Q53T59 392 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
SFXN3-202ENST00000393459 SYAP1Q96A49 352 aaPredicted RBP17.54■□□□□ 0.4
SFXN3-202ENST00000393459 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 A0A087WWV3 80 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 TULP4Q9NRJ4 1543 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
SFXN3-202ENST00000393459 BRD1O95696 1058 aa17.53■□□□□ 0.4
SFXN3-202ENST00000393459 PTGS1P23219 599 aa17.53■□□□□ 0.4
SFXN3-202ENST00000393459 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
SFXN3-202ENST00000393459 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
SFXN3-202ENST00000393459 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
SFXN3-202ENST00000393459 NRBP1Q9UHY1 535 aa17.53■□□□□ 0.4
SFXN3-202ENST00000393459 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 DMTNQ08495 405 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 NECAB1Q8N987 351 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 IBTKQ9P2D0 1353 aaPredicted RBP17.52■□□□□ 0.4
SFXN3-202ENST00000393459 ABCC4O15439 1325 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 PTPRMP28827 1452 aa17.52■□□□□ 0.4
SFXN3-202ENST00000393459 PIBF1Q8WXW3 757 aa17.52■□□□□ 0.39
SFXN3-202ENST00000393459 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
SFXN3-202ENST00000393459 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
SFXN3-202ENST00000393459 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
SFXN3-202ENST00000393459 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
SFXN3-202ENST00000393459 CHMP4BQ9H444 224 aaKnown RBP17.51■□□□□ 0.39
SFXN3-202ENST00000393459 MCCP23508 829 aa17.51■□□□□ 0.39
SFXN3-202ENST00000393459 CEBPZQ03701 1054 aaKnown RBP17.51■□□□□ 0.39
SFXN3-202ENST00000393459 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
SFXN3-202ENST00000393459 ESYT1Q9BSJ8 1104 aa17.5■□□□□ 0.39
SFXN3-202ENST00000393459 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
SFXN3-202ENST00000393459 PLCD3Q8N3E9 789 aa17.5■□□□□ 0.39
SFXN3-202ENST00000393459 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
SFXN3-202ENST00000393459 IL16Q14005 1332 aa17.49■□□□□ 0.39
SFXN3-202ENST00000393459 KCNF1Q9H3M0 494 aa17.49■□□□□ 0.39
SFXN3-202ENST00000393459 TNRQ92752 1358 aa17.49■□□□□ 0.39
SFXN3-202ENST00000393459 LARGE1O95461 756 aa17.49■□□□□ 0.39
SFXN3-202ENST00000393459 TERF1P54274 439 aa17.49■□□□□ 0.39
SFXN3-202ENST00000393459 TCHHQ07283 1943 aa17.48■□□□□ 0.39
SFXN3-202ENST00000393459 STK3Q13188 491 aa17.48■□□□□ 0.39
SFXN3-202ENST00000393459 MX1P20591 662 aa17.47■□□□□ 0.39
SFXN3-202ENST00000393459 NSD2O96028 1365 aa17.47■□□□□ 0.39
SFXN3-202ENST00000393459 CCDC186Q7Z3E2 898 aa17.47■□□□□ 0.39
SFXN3-202ENST00000393459 SMC3Q9UQE7 1217 aa17.47■□□□□ 0.39
SFXN3-202ENST00000393459 DLC1Q96QB1 1528 aa17.46■□□□□ 0.39
SFXN3-202ENST00000393459 SYT1P21579 422 aa17.46■□□□□ 0.39
SFXN3-202ENST00000393459 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
SFXN3-202ENST00000393459 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
SFXN3-202ENST00000393459 PHF14O94880 888 aa17.46■□□□□ 0.39
SFXN3-202ENST00000393459 MCM5P33992 734 aa17.46■□□□□ 0.39
SFXN3-202ENST00000393459 RASEFQ8IZ41 740 aa17.46■□□□□ 0.39
SFXN3-202ENST00000393459 COL9A3Q14050 684 aaPredicted RBP17.46■□□□□ 0.38
SFXN3-202ENST00000393459 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.38
SFXN3-202ENST00000393459 KDM4AO75164 1064 aa17.45■□□□□ 0.38
SFXN3-202ENST00000393459 AK2P54819 239 aa17.45■□□□□ 0.38
SFXN3-202ENST00000393459 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms