RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 OSBPP22059 807 aa11.43□□□□□ -0.58
CASP4-201ENST00000393150 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
CASP4-201ENST00000393150 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
CASP4-201ENST00000393150 GRXCR2A6NFK2 248 aa11.42□□□□□ -0.58
CASP4-201ENST00000393150 PDGFDQ9GZP0 370 aaPredicted RBP11.42□□□□□ -0.58
CASP4-201ENST00000393150 PLEKHG3A1L390 1219 aa11.41□□□□□ -0.58
CASP4-201ENST00000393150 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
CASP4-201ENST00000393150 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
CASP4-201ENST00000393150 SLC16A10Q8TF71 515 aa11.41□□□□□ -0.58
CASP4-201ENST00000393150 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
CASP4-201ENST00000393150 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.58
CASP4-201ENST00000393150 GPR37O15354 613 aa11.4□□□□□ -0.58
CASP4-201ENST00000393150 SRPK2P78362 688 aaKnown RBP11.4□□□□□ -0.58
CASP4-201ENST00000393150 DDX12PQ92771 950 aa11.4□□□□□ -0.58
CASP4-201ENST00000393150 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
CASP4-201ENST00000393150 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 HMGB2P26583 209 aaKnown RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 GPIHBP1Q8IV16 184 aa11.39□□□□□ -0.59
CASP4-201ENST00000393150 MARCH10Q8NA82 808 aaPredicted RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 GPBP1L1Q9HC44 474 aaPredicted RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 RGPD3A6NKT7 1758 aaPredicted RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 RGPD4Q7Z3J3 1758 aa11.39□□□□□ -0.59
CASP4-201ENST00000393150 USP19O94966 1318 aa11.39□□□□□ -0.59
CASP4-201ENST00000393150 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
CASP4-201ENST00000393150 ITSN1Q15811 1721 aa11.39□□□□□ -0.59
CASP4-201ENST00000393150 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
CASP4-201ENST00000393150 KCNH5Q8NCM2 988 aa11.38□□□□□ -0.59
CASP4-201ENST00000393150 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
CASP4-201ENST00000393150 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
CASP4-201ENST00000393150 MYOM1P52179 1685 aa11.38□□□□□ -0.59
CASP4-201ENST00000393150 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
CASP4-201ENST00000393150 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
CASP4-201ENST00000393150 BCL9O00512 1426 aa11.37□□□□□ -0.59
CASP4-201ENST00000393150 PARP4Q9UKK3 1724 aaKnown RBP11.37□□□□□ -0.59
CASP4-201ENST00000393150 TFCP2L1Q9NZI6 479 aa11.36□□□□□ -0.59
CASP4-201ENST00000393150 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
CASP4-201ENST00000393150 CASZ1Q86V15 1759 aa11.36□□□□□ -0.59
CASP4-201ENST00000393150 HSPA6P17066 643 aa11.35□□□□□ -0.59
CASP4-201ENST00000393150 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
CASP4-201ENST00000393150 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
CASP4-201ENST00000393150 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
CASP4-201ENST00000393150 CCDC7Q96M83 1385 aa11.34□□□□□ -0.59
CASP4-201ENST00000393150 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
CASP4-201ENST00000393150 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
CASP4-201ENST00000393150 PPIP5K1Q6PFW1 1433 aa11.32□□□□□ -0.6
CASP4-201ENST00000393150 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
CASP4-201ENST00000393150 KAT6BQ8WYB5 2073 aa11.32□□□□□ -0.6
CASP4-201ENST00000393150 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
CASP4-201ENST00000393150 LMO7Q8WWI1 1683 aa11.31□□□□□ -0.6
CASP4-201ENST00000393150 SBF2Q86WG5 1849 aa11.31□□□□□ -0.6
CASP4-201ENST00000393150 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
CASP4-201ENST00000393150 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
CASP4-201ENST00000393150 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
CASP4-201ENST00000393150 PCDHGA10Q9Y5H3 936 aa11.31□□□□□ -0.6
CASP4-201ENST00000393150 PHF14O94880 888 aa11.3□□□□□ -0.6
CASP4-201ENST00000393150 IL2RBP14784 551 aa11.3□□□□□ -0.6
CASP4-201ENST00000393150 APLP1P51693 650 aa11.3□□□□□ -0.6
CASP4-201ENST00000393150 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
CASP4-201ENST00000393150 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
CASP4-201ENST00000393150 USP6P35125 1406 aa11.3□□□□□ -0.6
CASP4-201ENST00000393150 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
CASP4-201ENST00000393150 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
CASP4-201ENST00000393150 ARHGEF25Q86VW2 580 aa11.29□□□□□ -0.6
CASP4-201ENST00000393150 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
CASP4-201ENST00000393150 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
CASP4-201ENST00000393150 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
CASP4-201ENST00000393150 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
CASP4-201ENST00000393150 CENPJQ9HC77 1338 aaPredicted RBP11.28□□□□□ -0.6
CASP4-201ENST00000393150 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
CASP4-201ENST00000393150 ATP10DQ9P241 1426 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 NUDT7P0C024 238 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
CASP4-201ENST00000393150 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 EPAS1Q99814 870 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
CASP4-201ENST00000393150 CPSF1Q10570 1443 aaKnown RBP11.26□□□□□ -0.61
CASP4-201ENST00000393150 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
CASP4-201ENST00000393150 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
CASP4-201ENST00000393150 FLAD1Q8NFF5 587 aa11.26□□□□□ -0.61
CASP4-201ENST00000393150 DDX54Q8TDD1 881 aaKnown RBP11.26□□□□□ -0.61
CASP4-201ENST00000393150 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
CASP4-201ENST00000393150 YBX3P16989 372 aaKnown RBP eCLIP11.25□□□□□ -0.61
CASP4-201ENST00000393150 FOSBP53539 338 aa11.25□□□□□ -0.61
CASP4-201ENST00000393150 PTGDRQ13258 359 aa11.25□□□□□ -0.61
CASP4-201ENST00000393150 FECHP22830 423 aa11.24□□□□□ -0.61
CASP4-201ENST00000393150 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
CASP4-201ENST00000393150 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
CASP4-201ENST00000393150 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
CASP4-201ENST00000393150 GOLGB1Q14789 3259 aaKnown RBP11.23□□□□□ -0.61
CASP4-201ENST00000393150 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
CASP4-201ENST00000393150 TTC21BQ7Z4L5 1316 aa11.23□□□□□ -0.61
CASP4-201ENST00000393150 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
CASP4-201ENST00000393150 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
CASP4-201ENST00000393150 AK7Q96M32 723 aa11.23□□□□□ -0.61
CASP4-201ENST00000393150 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
CASP4-201ENST00000393150 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
CASP4-201ENST00000393150 GNPATO15228 680 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms