RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 KIAA0232Q92628 1395 aa14.07□□□□□ -0.16
PDCD4-202ENST00000393104 GLIPR1L2Q4G1C9 344 aa14.07□□□□□ -0.16
PDCD4-202ENST00000393104 ANKRD44Q8N8A2 993 aa14.07□□□□□ -0.16
PDCD4-202ENST00000393104 R3HCC1Q9Y3T6 440 aaKnown RBP14.07□□□□□ -0.16
PDCD4-202ENST00000393104 N4BP2Q86UW6 1770 aaPredicted RBP14.07□□□□□ -0.16
PDCD4-202ENST00000393104 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
PDCD4-202ENST00000393104 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
PDCD4-202ENST00000393104 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
PDCD4-202ENST00000393104 EMILIN1Q9Y6C2 1016 aa14.06□□□□□ -0.16
PDCD4-202ENST00000393104 PALD1Q9ULE6 856 aa14.06□□□□□ -0.16
PDCD4-202ENST00000393104 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
PDCD4-202ENST00000393104 USP6P35125 1406 aa14.06□□□□□ -0.16
PDCD4-202ENST00000393104 KCNA6P17658 529 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 CFAP44Q96MT7 982 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 CCDC61Q9Y6R9 512 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 MSH6P52701 1360 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 SYCE3A1L190 88 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
PDCD4-202ENST00000393104 NUDT16Q96DE0 195 aaKnown RBP14.05□□□□□ -0.16
PDCD4-202ENST00000393104 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 BRD1O95696 1058 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 DCTN1Q14203 1278 aa14.05□□□□□ -0.16
PDCD4-202ENST00000393104 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.05□□□□□ -0.16
PDCD4-202ENST00000393104 CUL4AQ13619 759 aa14.04□□□□□ -0.16
PDCD4-202ENST00000393104 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
PDCD4-202ENST00000393104 NUCB2P80303 420 aa14.04□□□□□ -0.16
PDCD4-202ENST00000393104 UQCRHLA0A096LP55 91 aa14.03□□□□□ -0.16
PDCD4-202ENST00000393104 UQCRHP07919 91 aa14.03□□□□□ -0.16
PDCD4-202ENST00000393104 SLC26A8Q96RN1 970 aa14.03□□□□□ -0.16
PDCD4-202ENST00000393104 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
PDCD4-202ENST00000393104 OSBPL3Q9H4L5 887 aa14.03□□□□□ -0.16
PDCD4-202ENST00000393104 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.16
PDCD4-202ENST00000393104 GADD45BO75293 160 aaPredicted RBP14.02□□□□□ -0.16
PDCD4-202ENST00000393104 AP5Z1O43299 807 aa14.02□□□□□ -0.17
PDCD4-202ENST00000393104 TSC1Q92574 1164 aa14.02□□□□□ -0.17
PDCD4-202ENST00000393104 MEIS3Q99687 375 aa14.02□□□□□ -0.17
PDCD4-202ENST00000393104 CWC22Q9HCG8 908 aaKnown RBP14.02□□□□□ -0.17
PDCD4-202ENST00000393104 TTC21AQ8NDW8 1320 aa14.01□□□□□ -0.17
PDCD4-202ENST00000393104 TMX3Q96JJ7 454 aa14.01□□□□□ -0.17
PDCD4-202ENST00000393104 CRB1P82279 1406 aa14.01□□□□□ -0.17
PDCD4-202ENST00000393104 RPAP1Q9BWH6 1393 aaPredicted RBP14.01□□□□□ -0.17
PDCD4-202ENST00000393104 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDCD4-202ENST00000393104 FAM13BQ9NYF5 915 aa14□□□□□ -0.17
PDCD4-202ENST00000393104 GNAI1P63096 354 aa14□□□□□ -0.17
PDCD4-202ENST00000393104 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
PDCD4-202ENST00000393104 ZSCAN20P17040 1043 aaPredicted RBP14□□□□□ -0.17
PDCD4-202ENST00000393104 ALS2Q96Q42 1657 aa13.99□□□□□ -0.17
PDCD4-202ENST00000393104 TSHZ3Q63HK5 1081 aa13.99□□□□□ -0.17
PDCD4-202ENST00000393104 MCM5P33992 734 aa13.99□□□□□ -0.17
PDCD4-202ENST00000393104 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
PDCD4-202ENST00000393104 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
PDCD4-202ENST00000393104 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
PDCD4-202ENST00000393104 LRRC37A3O60309 1634 aa13.98□□□□□ -0.17
PDCD4-202ENST00000393104 GTF2F1P35269 517 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDCD4-202ENST00000393104 NME9Q86XW9 330 aa13.98□□□□□ -0.17
PDCD4-202ENST00000393104 CHL1O00533 1208 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 UNC5CLQ8IV45 518 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDCD4-202ENST00000393104 FUCA2Q9BTY2 467 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 SLIT3O75094 1523 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 PDE1AP54750 535 aa13.97□□□□□ -0.17
PDCD4-202ENST00000393104 C17orf53Q8N3J3 647 aaPredicted RBP13.97□□□□□ -0.17
PDCD4-202ENST00000393104 RNF214Q8ND24 703 aa13.96□□□□□ -0.17
PDCD4-202ENST00000393104 GOLGA6L22H0YM25 854 aa13.96□□□□□ -0.17
PDCD4-202ENST00000393104 ABCC6O95255 1503 aa13.96□□□□□ -0.17
PDCD4-202ENST00000393104 G2E3Q7L622 706 aa13.96□□□□□ -0.18
PDCD4-202ENST00000393104 API5Q9BZZ5 524 aaKnown RBP13.96□□□□□ -0.18
PDCD4-202ENST00000393104 FOXD4L5Q5VV16 416 aaPredicted RBP13.95□□□□□ -0.18
PDCD4-202ENST00000393104 FOXD4L4Q8WXT5 416 aaPredicted RBP13.95□□□□□ -0.18
PDCD4-202ENST00000393104 ZNF830Q96NB3 372 aaPredicted RBP13.95□□□□□ -0.18
PDCD4-202ENST00000393104 NCLP19338 710 aaKnown RBP13.95□□□□□ -0.18
PDCD4-202ENST00000393104 SASS6Q6UVJ0 657 aa13.95□□□□□ -0.18
PDCD4-202ENST00000393104 RPAP2Q8IXW5 612 aaPredicted RBP13.95□□□□□ -0.18
PDCD4-202ENST00000393104 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
PDCD4-202ENST00000393104 MYRIPQ8NFW9 859 aa13.95□□□□□ -0.18
PDCD4-202ENST00000393104 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
PDCD4-202ENST00000393104 SPTLC3Q9NUV7 552 aa13.95□□□□□ -0.18
PDCD4-202ENST00000393104 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
PDCD4-202ENST00000393104 TTC21BQ7Z4L5 1316 aa13.94□□□□□ -0.18
PDCD4-202ENST00000393104 KCNF1Q9H3M0 494 aa13.94□□□□□ -0.18
PDCD4-202ENST00000393104 ERC2O15083 957 aa13.94□□□□□ -0.18
PDCD4-202ENST00000393104 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
PDCD4-202ENST00000393104 ACEP12821 1306 aa13.93□□□□□ -0.18
PDCD4-202ENST00000393104 ATP2B3Q16720 1220 aa13.93□□□□□ -0.18
PDCD4-202ENST00000393104 SMAP1Q8IYB5 467 aaPredicted RBP13.93□□□□□ -0.18
PDCD4-202ENST00000393104 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
PDCD4-202ENST00000393104 ESYT1Q9BSJ8 1104 aa13.93□□□□□ -0.18
PDCD4-202ENST00000393104 NFAT5O94916 1531 aa13.93□□□□□ -0.18
PDCD4-202ENST00000393104 MPNDQ8N594 471 aa13.93□□□□□ -0.18
PDCD4-202ENST00000393104 FAM177BA6PVY3 158 aa13.92□□□□□ -0.18
PDCD4-202ENST00000393104 USP48Q86UV5 1035 aa13.92□□□□□ -0.18
PDCD4-202ENST00000393104 CCDC39Q9UFE4 941 aa13.92□□□□□ -0.18
PDCD4-202ENST00000393104 LTN1O94822 1766 aa13.92□□□□□ -0.18
PDCD4-202ENST00000393104 NEK4P51957 841 aa13.92□□□□□ -0.18
PDCD4-202ENST00000393104 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
PDCD4-202ENST00000393104 CHMLP26374 656 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms