RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
LCA5-202ENST00000392959 BMP2KQ9NSY1 1161 aaPredicted RBP15.36■□□□□ 0.05
LCA5-202ENST00000392959 EIF5P55010 431 aaKnown RBP15.36■□□□□ 0.05
LCA5-202ENST00000392959 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
LCA5-202ENST00000392959 IGHDP01880 384 aa15.35■□□□□ 0.05
LCA5-202ENST00000392959 ZSCAN12O43309 604 aa15.35■□□□□ 0.05
LCA5-202ENST00000392959 PDCL3Q9H2J4 239 aa15.35■□□□□ 0.05
LCA5-202ENST00000392959 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
LCA5-202ENST00000392959 LARP1Q6PKG0 1096 aaKnown RBP15.35■□□□□ 0.05
LCA5-202ENST00000392959 CCDC141Q6ZP82 1450 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
LCA5-202ENST00000392959 ERICH4A6NGS2 130 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 SSBP05455 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
LCA5-202ENST00000392959 NEFHP12036 1026 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 FAM193AP78312 1265 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 TAF7Q15545 349 aaPredicted RBP15.34■□□□□ 0.05
LCA5-202ENST00000392959 CEP131Q9UPN4 1083 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 KLHL40Q2TBA0 621 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 CKAP2LQ8IYA6 745 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 GDPD2Q9HCC8 539 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 LRP2BPQ9P2M1 347 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 KIAA1328Q86T90 577 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
LCA5-202ENST00000392959 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
LCA5-202ENST00000392959 ABCC5O15440 1437 aa15.33■□□□□ 0.05
LCA5-202ENST00000392959 CTAGE5O15320 804 aa15.33■□□□□ 0.05
LCA5-202ENST00000392959 MCM5P33992 734 aa15.33■□□□□ 0.05
LCA5-202ENST00000392959 C8orf76Q96K31 380 aa15.33■□□□□ 0.04
LCA5-202ENST00000392959 DDX19AQ9NUU7 478 aaKnown RBP15.33■□□□□ 0.04
LCA5-202ENST00000392959 RAI14Q9P0K7 980 aa15.33■□□□□ 0.04
LCA5-202ENST00000392959 URI1O94763 535 aaPredicted RBP15.33■□□□□ 0.04
LCA5-202ENST00000392959 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
LCA5-202ENST00000392959 WAPLQ7Z5K2 1190 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 NESP48681 1621 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 PRDM11Q9NQV5 511 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 GOLGA6L7A0A1B0GV03 622 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
LCA5-202ENST00000392959 TNNT1P13805 278 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 CBX1P83916 185 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 MEX3CQ5U5Q3 659 aaKnown RBP15.32■□□□□ 0.04
LCA5-202ENST00000392959 NME9Q86XW9 330 aa15.32■□□□□ 0.04
LCA5-202ENST00000392959 CALRP27797 417 aaKnown RBP15.31■□□□□ 0.04
LCA5-202ENST00000392959 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
LCA5-202ENST00000392959 RPRD2Q5VT52 1461 aaKnown RBP15.31■□□□□ 0.04
LCA5-202ENST00000392959 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
LCA5-202ENST00000392959 DNAAF4Q8WXU2 420 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 PTPRCP08575 1304 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 STX6O43752 255 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
LCA5-202ENST00000392959 USP8P40818 1118 aa15.31■□□□□ 0.04
LCA5-202ENST00000392959 NEMFO60524 1076 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 METTL24Q5JXM2 366 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 C16orf45Q96MC5 204 aaPredicted RBP15.3■□□□□ 0.04
LCA5-202ENST00000392959 GUCY1B3Q02153 619 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 HSP90AB3PQ58FF7 597 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 KCNH5Q8NCM2 988 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 TAF4BQ92750 862 aa15.3■□□□□ 0.04
LCA5-202ENST00000392959 TFIP11Q9UBB9 837 aaKnown RBP15.3■□□□□ 0.04
LCA5-202ENST00000392959 FLIIQ13045 1269 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 PIBF1Q8WXW3 757 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 CCDC196A0A1B0GTZ2 297 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 ADCY5O95622 1261 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 ZC3H6P61129 1189 aaKnown RBP15.29■□□□□ 0.04
LCA5-202ENST00000392959 TMEM132AQ24JP5 1023 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
LCA5-202ENST00000392959 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 KIF5CO60282 957 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
LCA5-202ENST00000392959 TAF3Q5VWG9 929 aa15.29■□□□□ 0.04
LCA5-202ENST00000392959 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 MAP3K1Q13233 1512 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 KIAA0586Q9BVV6 1533 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
LCA5-202ENST00000392959 TRMT1Q9NXH9 659 aaKnown RBP15.28■□□□□ 0.04
LCA5-202ENST00000392959 ZNF165P49910 485 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 FSIP1Q8NA03 581 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
LCA5-202ENST00000392959 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
LCA5-202ENST00000392959 SEPT7Q16181 437 aaKnown RBP15.28■□□□□ 0.04
LCA5-202ENST00000392959 TTC22Q5TAA0 569 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
LCA5-202ENST00000392959 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
LCA5-202ENST00000392959 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 GJB2P29033 226 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 MYD88Q99836 296 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 NAPBQ9H115 298 aa15.27■□□□□ 0.04
LCA5-202ENST00000392959 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms