RNA–Protein interactions for RNA: ENST00000392927.7

SYCP3-203, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-203ENST00000392927 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
SYCP3-203ENST00000392927 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
SYCP3-203ENST00000392927 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
SYCP3-203ENST00000392927 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
SYCP3-203ENST00000392927 PTGER2P43116 358 aa16.49■□□□□ 0.23
SYCP3-203ENST00000392927 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
SYCP3-203ENST00000392927 DIAPH1O60610 1272 aaKnown RBP16.48■□□□□ 0.23
SYCP3-203ENST00000392927 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
SYCP3-203ENST00000392927 HMOX1P09601 288 aa16.47■□□□□ 0.23
SYCP3-203ENST00000392927 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
SYCP3-203ENST00000392927 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
SYCP3-203ENST00000392927 COL5A3P25940 1745 aaPredicted RBP16.46■□□□□ 0.23
SYCP3-203ENST00000392927 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
SYCP3-203ENST00000392927 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
SYCP3-203ENST00000392927 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
SYCP3-203ENST00000392927 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
SYCP3-203ENST00000392927 ADAMTS7Q9UKP4 1686 aa16.44■□□□□ 0.22
SYCP3-203ENST00000392927 LOC102724428A0A0B4J2F2 783 aa16.44■□□□□ 0.22
SYCP3-203ENST00000392927 SIK1P57059 783 aa16.44■□□□□ 0.22
SYCP3-203ENST00000392927 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
SYCP3-203ENST00000392927 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
SYCP3-203ENST00000392927 MRC1P22897 1456 aa16.43■□□□□ 0.22
SYCP3-203ENST00000392927 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
SYCP3-203ENST00000392927 HMGB2P26583 209 aaKnown RBP16.43■□□□□ 0.22
SYCP3-203ENST00000392927 AK7Q96M32 723 aa16.43■□□□□ 0.22
SYCP3-203ENST00000392927 CABP4P57796 275 aa16.42■□□□□ 0.22
SYCP3-203ENST00000392927 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
SYCP3-203ENST00000392927 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
SYCP3-203ENST00000392927 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
SYCP3-203ENST00000392927 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
SYCP3-203ENST00000392927 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
SYCP3-203ENST00000392927 CFAP53Q96M91 514 aa16.41■□□□□ 0.22
SYCP3-203ENST00000392927 ARXQ96QS3 562 aa16.41■□□□□ 0.22
SYCP3-203ENST00000392927 TJP1Q07157 1748 aa16.41■□□□□ 0.22
SYCP3-203ENST00000392927 POLD1P28340 1107 aa16.4■□□□□ 0.22
SYCP3-203ENST00000392927 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
SYCP3-203ENST00000392927 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
SYCP3-203ENST00000392927 ITPK1Q13572 414 aa16.4■□□□□ 0.22
SYCP3-203ENST00000392927 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
SYCP3-203ENST00000392927 PHF14O94880 888 aa16.39■□□□□ 0.21
SYCP3-203ENST00000392927 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
SYCP3-203ENST00000392927 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
SYCP3-203ENST00000392927 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
SYCP3-203ENST00000392927 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
SYCP3-203ENST00000392927 FLAD1Q8NFF5 587 aa16.38■□□□□ 0.21
SYCP3-203ENST00000392927 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
SYCP3-203ENST00000392927 C4AP0C0L4 1744 aa16.37■□□□□ 0.21
SYCP3-203ENST00000392927 GNPATO15228 680 aa16.37■□□□□ 0.21
SYCP3-203ENST00000392927 NFATC2IPQ8NCF5 419 aa16.37■□□□□ 0.21
SYCP3-203ENST00000392927 UTRNP46939 3433 aa16.37■□□□□ 0.21
SYCP3-203ENST00000392927 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
SYCP3-203ENST00000392927 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.36■□□□□ 0.21
SYCP3-203ENST00000392927 SSFA2P28290 1259 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 SYT17Q9BSW7 474 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
SYCP3-203ENST00000392927 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
SYCP3-203ENST00000392927 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
SYCP3-203ENST00000392927 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
SYCP3-203ENST00000392927 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
SYCP3-203ENST00000392927 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
SYCP3-203ENST00000392927 GAS2L2Q8NHY3 880 aa16.34■□□□□ 0.21
SYCP3-203ENST00000392927 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
SYCP3-203ENST00000392927 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
SYCP3-203ENST00000392927 PRKAR2BP31323 418 aa16.33■□□□□ 0.2
SYCP3-203ENST00000392927 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
SYCP3-203ENST00000392927 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
SYCP3-203ENST00000392927 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
SYCP3-203ENST00000392927 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
SYCP3-203ENST00000392927 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
SYCP3-203ENST00000392927 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
SYCP3-203ENST00000392927 GNAT3A8MTJ3 354 aa16.3■□□□□ 0.2
SYCP3-203ENST00000392927 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
SYCP3-203ENST00000392927 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
SYCP3-203ENST00000392927 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
SYCP3-203ENST00000392927 TEFQ10587 303 aa16.28■□□□□ 0.2
SYCP3-203ENST00000392927 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
SYCP3-203ENST00000392927 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
SYCP3-203ENST00000392927 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
SYCP3-203ENST00000392927 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.2
SYCP3-203ENST00000392927 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
SYCP3-203ENST00000392927 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
SYCP3-203ENST00000392927 CHD4Q14839 1912 aa16.26■□□□□ 0.19
SYCP3-203ENST00000392927 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
SYCP3-203ENST00000392927 FCHSD2O94868 740 aa16.26■□□□□ 0.19
SYCP3-203ENST00000392927 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
SYCP3-203ENST00000392927 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
SYCP3-203ENST00000392927 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
SYCP3-203ENST00000392927 KIF13BQ9NQT8 1826 aa16.24■□□□□ 0.19
SYCP3-203ENST00000392927 YY1P25490 414 aa16.24■□□□□ 0.19
SYCP3-203ENST00000392927 RFC4P35249 363 aa16.24■□□□□ 0.19
SYCP3-203ENST00000392927 RALBP1Q15311 655 aa16.24■□□□□ 0.19
SYCP3-203ENST00000392927 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
SYCP3-203ENST00000392927 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
SYCP3-203ENST00000392927 MMP10P09238 476 aa16.23■□□□□ 0.19
SYCP3-203ENST00000392927 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SYCP3-203ENST00000392927 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms