RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
CSHL1-204ENST00000392824 SIK1P57059 783 aa21.28■■□□□ 1
CSHL1-204ENST00000392824 NFE2L2Q16236 605 aa21.28■■□□□ 1
CSHL1-204ENST00000392824 SLC15A2Q16348 729 aa21.28■■□□□ 1
CSHL1-204ENST00000392824 ANO8Q9HCE9 1232 aaPredicted RBP21.28■■□□□ 1
CSHL1-204ENST00000392824 CCDC146Q8IYE0 955 aa21.27■■□□□ 1
CSHL1-204ENST00000392824 RUNDC1Q96C34 613 aa21.27■■□□□ 1
CSHL1-204ENST00000392824 RREB1Q92766 1687 aa21.26■□□□□ 0.99
CSHL1-204ENST00000392824 ATP6V1AP38606 617 aa21.26■□□□□ 0.99
CSHL1-204ENST00000392824 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
CSHL1-204ENST00000392824 MCM10Q7L590 875 aa21.26■□□□□ 0.99
CSHL1-204ENST00000392824 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
CSHL1-204ENST00000392824 ITGB4P16144 1822 aa21.25■□□□□ 0.99
CSHL1-204ENST00000392824 RIPK4P57078 832 aa21.24■□□□□ 0.99
CSHL1-204ENST00000392824 TFCP2L1Q9NZI6 479 aa21.24■□□□□ 0.99
CSHL1-204ENST00000392824 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
CSHL1-204ENST00000392824 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
CSHL1-204ENST00000392824 TTC5Q8N0Z6 440 aa21.23■□□□□ 0.99
CSHL1-204ENST00000392824 AKT1S1Q96B36 256 aa21.23■□□□□ 0.99
CSHL1-204ENST00000392824 NUP188Q5SRE5 1749 aa21.23■□□□□ 0.99
CSHL1-204ENST00000392824 CEMIPQ8WUJ3 1361 aa21.23■□□□□ 0.99
CSHL1-204ENST00000392824 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
CSHL1-204ENST00000392824 ZNF827Q17R98 1081 aa21.22■□□□□ 0.99
CSHL1-204ENST00000392824 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
CSHL1-204ENST00000392824 LMOD3Q0VAK6 560 aa21.21■□□□□ 0.99
CSHL1-204ENST00000392824 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CSHL1-204ENST00000392824 PNISRQ8TF01 805 aaKnown RBP21.21■□□□□ 0.99
CSHL1-204ENST00000392824 AK7Q96M32 723 aa21.2■□□□□ 0.98
CSHL1-204ENST00000392824 RRP7AQ9Y3A4 280 aaKnown RBP21.2■□□□□ 0.98
CSHL1-204ENST00000392824 SCN11AQ9UI33 1791 aa21.19■□□□□ 0.98
CSHL1-204ENST00000392824 ITPK1Q13572 414 aa21.19■□□□□ 0.98
CSHL1-204ENST00000392824 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
CSHL1-204ENST00000392824 MRC1P22897 1456 aa21.19■□□□□ 0.98
CSHL1-204ENST00000392824 ZNF790Q6PG37 636 aa21.18■□□□□ 0.98
CSHL1-204ENST00000392824 LINC00116Q8NCU8 138 aa21.18■□□□□ 0.98
CSHL1-204ENST00000392824 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
CSHL1-204ENST00000392824 LY75O60449 1722 aa21.18■□□□□ 0.98
CSHL1-204ENST00000392824 MSH5O43196 834 aa21.16■□□□□ 0.98
CSHL1-204ENST00000392824 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
CSHL1-204ENST00000392824 FLAD1Q8NFF5 587 aa21.16■□□□□ 0.98
CSHL1-204ENST00000392824 ADAMTS7Q9UKP4 1686 aa21.15■□□□□ 0.98
CSHL1-204ENST00000392824 APAF1O14727 1248 aa21.15■□□□□ 0.98
CSHL1-204ENST00000392824 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
CSHL1-204ENST00000392824 VSIG10Q8N0Z9 540 aa21.14■□□□□ 0.97
CSHL1-204ENST00000392824 FMNL2Q96PY5 1086 aa21.14■□□□□ 0.97
CSHL1-204ENST00000392824 RC3H1Q5TC82 1133 aaKnown RBP21.13■□□□□ 0.97
CSHL1-204ENST00000392824 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
CSHL1-204ENST00000392824 ZNF496Q96IT1 587 aaPredicted RBP21.13■□□□□ 0.97
CSHL1-204ENST00000392824 PDGFDQ9GZP0 370 aaPredicted RBP21.13■□□□□ 0.97
CSHL1-204ENST00000392824 PAPPAQ13219 1627 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 GNPATO15228 680 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 ZBTB7AO95365 584 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 DNAJC10Q8IXB1 793 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
CSHL1-204ENST00000392824 SPON1Q9HCB6 807 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
CSHL1-204ENST00000392824 KCNQ3O43525 872 aa21.11■□□□□ 0.97
CSHL1-204ENST00000392824 PHF14O94880 888 aa21.11■□□□□ 0.97
CSHL1-204ENST00000392824 SLC16A10Q8TF71 515 aa21.11■□□□□ 0.97
CSHL1-204ENST00000392824 RTCBQ9Y3I0 505 aaKnown RBP21.11■□□□□ 0.97
CSHL1-204ENST00000392824 CNTNAP4Q9C0A0 1308 aa21.1■□□□□ 0.97
CSHL1-204ENST00000392824 STARD3NLO95772 234 aa21.1■□□□□ 0.97
CSHL1-204ENST00000392824 SSFA2P28290 1259 aa21.1■□□□□ 0.97
CSHL1-204ENST00000392824 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
CSHL1-204ENST00000392824 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
CSHL1-204ENST00000392824 TRIM35Q9UPQ4 493 aa21.1■□□□□ 0.97
CSHL1-204ENST00000392824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.09■□□□□ 0.97
CSHL1-204ENST00000392824 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
CSHL1-204ENST00000392824 ATF5Q9Y2D1 282 aaPredicted RBP21.09■□□□□ 0.97
CSHL1-204ENST00000392824 HEG1Q9ULI3 1381 aa21.09■□□□□ 0.97
CSHL1-204ENST00000392824 RPS6KA4O75676 772 aa21.08■□□□□ 0.97
CSHL1-204ENST00000392824 CYP19A1P11511 503 aaPredicted RBP21.08■□□□□ 0.97
CSHL1-204ENST00000392824 TRAPPC3LQ5T215 181 aa21.08■□□□□ 0.97
CSHL1-204ENST00000392824 TSPYL4Q9UJ04 414 aa21.08■□□□□ 0.97
CSHL1-204ENST00000392824 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
CSHL1-204ENST00000392824 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
CSHL1-204ENST00000392824 CCDC87Q9NVE4 849 aa21.07■□□□□ 0.96
CSHL1-204ENST00000392824 BABAM1Q9NWV8 329 aa21.07■□□□□ 0.96
CSHL1-204ENST00000392824 C5P01031 1676 aa21.07■□□□□ 0.96
CSHL1-204ENST00000392824 KCPQ6ZWJ8 1503 aa21.06■□□□□ 0.96
CSHL1-204ENST00000392824 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
CSHL1-204ENST00000392824 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
CSHL1-204ENST00000392824 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
CSHL1-204ENST00000392824 C4BP0C0L5 1744 aa21.06■□□□□ 0.96
CSHL1-204ENST00000392824 ADRA2BP18089 450 aa21.05■□□□□ 0.96
CSHL1-204ENST00000392824 INTS5Q6P9B9 1019 aaKnown RBP21.05■□□□□ 0.96
CSHL1-204ENST00000392824 VIRMAQ69YN4 1812 aaKnown RBP21.04■□□□□ 0.96
CSHL1-204ENST00000392824 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
CSHL1-204ENST00000392824 PPP1R1BQ9UD71 204 aaPredicted RBP21.04■□□□□ 0.96
CSHL1-204ENST00000392824 ZNF831Q5JPB2 1677 aa21.03■□□□□ 0.96
CSHL1-204ENST00000392824 SENP3-EIF4A1A0A087X0R7 540 aa21.03■□□□□ 0.96
CSHL1-204ENST00000392824 RFC4P35249 363 aa21.03■□□□□ 0.96
CSHL1-204ENST00000392824 EIF4A1P60842 406 aaKnown RBP21.03■□□□□ 0.96
CSHL1-204ENST00000392824 ARHGEF1Q92888 912 aaKnown RBP21.03■□□□□ 0.96
CSHL1-204ENST00000392824 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.96
CSHL1-204ENST00000392824 TAF1LQ8IZX4 1826 aa21.02■□□□□ 0.96
CSHL1-204ENST00000392824 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
CSHL1-204ENST00000392824 POLD1P28340 1107 aa21.02■□□□□ 0.96
CSHL1-204ENST00000392824 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms