RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 ANKLE2Q86XL3 938 aa18.05■□□□□ 0.48
SC5D-202ENST00000392789 IP6K1Q92551 441 aa18.04■□□□□ 0.48
SC5D-202ENST00000392789 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
SC5D-202ENST00000392789 GBP4Q96PP9 640 aa18.04■□□□□ 0.48
SC5D-202ENST00000392789 ADGRL3Q9HAR2 1447 aa18.03■□□□□ 0.48
SC5D-202ENST00000392789 REC8O95072 547 aa18.02■□□□□ 0.48
SC5D-202ENST00000392789 PDE1AP54750 535 aa18.02■□□□□ 0.48
SC5D-202ENST00000392789 USHBP1Q8N6Y0 703 aa18.02■□□□□ 0.48
SC5D-202ENST00000392789 NECTIN2Q92692 538 aa18.02■□□□□ 0.48
SC5D-202ENST00000392789 MED1Q15648 1581 aaPredicted RBP18.02■□□□□ 0.48
SC5D-202ENST00000392789 PHRF1Q9P1Y6 1649 aaKnown RBP18.02■□□□□ 0.48
SC5D-202ENST00000392789 CEMIPQ8WUJ3 1361 aa18.02■□□□□ 0.47
SC5D-202ENST00000392789 PTMSP20962 102 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 ATP8B2P98198 1209 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 GOLGA6L3A6NEY3 463 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 KCNH5Q8NCM2 988 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 EXOC6BQ9Y2D4 811 aa18.01■□□□□ 0.47
SC5D-202ENST00000392789 FSD2A1L4K1 749 aa18■□□□□ 0.47
SC5D-202ENST00000392789 ERC2O15083 957 aa18■□□□□ 0.47
SC5D-202ENST00000392789 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
SC5D-202ENST00000392789 IBTKQ9P2D0 1353 aaPredicted RBP17.99■□□□□ 0.47
SC5D-202ENST00000392789 TUBGCP6Q96RT7 1819 aa17.99■□□□□ 0.47
SC5D-202ENST00000392789 SALL3Q9BXA9 1300 aa17.99■□□□□ 0.47
SC5D-202ENST00000392789 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
SC5D-202ENST00000392789 PSME1Q06323 249 aa17.99■□□□□ 0.47
SC5D-202ENST00000392789 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
SC5D-202ENST00000392789 KDM3BQ7LBC6 1761 aa17.99■□□□□ 0.47
SC5D-202ENST00000392789 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
SC5D-202ENST00000392789 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
SC5D-202ENST00000392789 ESCO1Q5FWF5 840 aa17.98■□□□□ 0.47
SC5D-202ENST00000392789 NBPF6Q5VWK0 638 aa17.98■□□□□ 0.47
SC5D-202ENST00000392789 NBPF4Q96M43 638 aa17.98■□□□□ 0.47
SC5D-202ENST00000392789 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
SC5D-202ENST00000392789 LRRFIP2Q9Y608 721 aaKnown RBP17.98■□□□□ 0.47
SC5D-202ENST00000392789 HOXB7P09629 217 aa17.97■□□□□ 0.47
SC5D-202ENST00000392789 ST18O60284 1047 aa17.97■□□□□ 0.47
SC5D-202ENST00000392789 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
SC5D-202ENST00000392789 MX1P20591 662 aa17.97■□□□□ 0.47
SC5D-202ENST00000392789 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
SC5D-202ENST00000392789 SKOR2Q2VWA4 1001 aaPredicted RBP17.96■□□□□ 0.47
SC5D-202ENST00000392789 USP44Q9H0E7 712 aa17.96■□□□□ 0.47
SC5D-202ENST00000392789 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
SC5D-202ENST00000392789 RGPD2P0DJD1 1756 aa17.95■□□□□ 0.46
SC5D-202ENST00000392789 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
SC5D-202ENST00000392789 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
SC5D-202ENST00000392789 CLEC17AQ6ZS10 378 aa17.95■□□□□ 0.46
SC5D-202ENST00000392789 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
SC5D-202ENST00000392789 ISY1Q9ULR0 285 aaKnown RBP17.95■□□□□ 0.46
SC5D-202ENST00000392789 SSFA2P28290 1259 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 LGR6Q9HBX8 967 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 STAP2Q9UGK3 403 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 SLIT3O75094 1523 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 AOX1Q06278 1338 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
SC5D-202ENST00000392789 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 GOLGA6L22H0YM25 854 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 XRCC6P12956 609 aaKnown RBP eCLIP17.93■□□□□ 0.46
SC5D-202ENST00000392789 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
SC5D-202ENST00000392789 SSH3Q8TE77 659 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
SC5D-202ENST00000392789 NUCB2P80303 420 aa17.92■□□□□ 0.46
SC5D-202ENST00000392789 TEFQ10587 303 aa17.92■□□□□ 0.46
SC5D-202ENST00000392789 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
SC5D-202ENST00000392789 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
SC5D-202ENST00000392789 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
SC5D-202ENST00000392789 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
SC5D-202ENST00000392789 NPHP4O75161 1426 aaPredicted RBP17.92■□□□□ 0.46
SC5D-202ENST00000392789 MRE11P49959 708 aa17.91■□□□□ 0.46
SC5D-202ENST00000392789 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
SC5D-202ENST00000392789 CWC22Q9HCG8 908 aaKnown RBP17.91■□□□□ 0.46
SC5D-202ENST00000392789 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
SC5D-202ENST00000392789 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
SC5D-202ENST00000392789 LRRC59Q96AG4 307 aaKnown RBP17.91■□□□□ 0.46
SC5D-202ENST00000392789 ARXQ96QS3 562 aa17.91■□□□□ 0.46
SC5D-202ENST00000392789 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
SC5D-202ENST00000392789 CHPF2Q9P2E5 772 aa17.9■□□□□ 0.46
SC5D-202ENST00000392789 BTBD11A6QL63 1104 aa17.89■□□□□ 0.46
SC5D-202ENST00000392789 MCCP23508 829 aa17.89■□□□□ 0.46
SC5D-202ENST00000392789 POLA2Q14181 598 aa17.89■□□□□ 0.46
SC5D-202ENST00000392789 TRIM6-TRIM34B2RNG4 842 aa17.89■□□□□ 0.45
SC5D-202ENST00000392789 GCP02774 474 aa17.89■□□□□ 0.45
SC5D-202ENST00000392789 PPP1R42Q7Z4L9 355 aa17.89■□□□□ 0.45
SC5D-202ENST00000392789 ARHGEF25Q86VW2 580 aa17.89■□□□□ 0.45
SC5D-202ENST00000392789 DNAAF4Q8WXU2 420 aa17.89■□□□□ 0.45
SC5D-202ENST00000392789 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
SC5D-202ENST00000392789 BAG4O95429 457 aaKnown RBP17.88■□□□□ 0.45
SC5D-202ENST00000392789 CHMLP26374 656 aa17.88■□□□□ 0.45
SC5D-202ENST00000392789 C1orf141Q5JVX7 400 aa17.88■□□□□ 0.45
SC5D-202ENST00000392789 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
SC5D-202ENST00000392789 BEND3Q5T5X7 828 aa17.88■□□□□ 0.45
SC5D-202ENST00000392789 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
SC5D-202ENST00000392789 MPRIPQ6WCQ1 1025 aa17.87■□□□□ 0.45
SC5D-202ENST00000392789 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
SC5D-202ENST00000392789 PXDNQ92626 1479 aa17.87■□□□□ 0.45
SC5D-202ENST00000392789 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
SC5D-202ENST00000392789 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms