RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 KDM3BQ7LBC6 1761 aa25.26■■□□□ 1.63
PTPN11-202ENST00000392597 ERICH6Q7L0X2 663 aa25.26■■□□□ 1.63
PTPN11-202ENST00000392597 PLEKHG2Q9H7P9 1386 aa25.26■■□□□ 1.63
PTPN11-202ENST00000392597 NUCB1Q02818 461 aa25.26■■□□□ 1.63
PTPN11-202ENST00000392597 ANP32EQ9BTT0 268 aa25.26■■□□□ 1.63
PTPN11-202ENST00000392597 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
PTPN11-202ENST00000392597 CABLES1Q8TDN4 633 aa25.24■■□□□ 1.63
PTPN11-202ENST00000392597 CHMP4AQ9BY43 222 aa25.24■■□□□ 1.63
PTPN11-202ENST00000392597 PLEKHG5O94827 1062 aa25.23■■□□□ 1.63
PTPN11-202ENST00000392597 HOXB7P09629 217 aa25.23■■□□□ 1.63
PTPN11-202ENST00000392597 C1orf141Q5JVX7 400 aa25.23■■□□□ 1.63
PTPN11-202ENST00000392597 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
PTPN11-202ENST00000392597 CPDO75976 1380 aa25.22■■□□□ 1.63
PTPN11-202ENST00000392597 ZBTB47Q9UFB7 747 aaPredicted RBP25.22■■□□□ 1.63
PTPN11-202ENST00000392597 CCT4P50991 539 aaKnown RBP25.21■■□□□ 1.63
PTPN11-202ENST00000392597 LGR6Q9HBX8 967 aa25.21■■□□□ 1.63
PTPN11-202ENST00000392597 ADAMTS7Q9UKP4 1686 aa25.21■■□□□ 1.63
PTPN11-202ENST00000392597 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
PTPN11-202ENST00000392597 SIRT2Q8IXJ6 389 aa25.21■■□□□ 1.63
PTPN11-202ENST00000392597 C1orf115Q9H7X2 142 aa25.21■■□□□ 1.63
PTPN11-202ENST00000392597 TEFQ10587 303 aa25.2■■□□□ 1.62
PTPN11-202ENST00000392597 G2E3Q7L622 706 aa25.19■■□□□ 1.62
PTPN11-202ENST00000392597 CHD1LQ86WJ1 897 aa25.19■■□□□ 1.62
PTPN11-202ENST00000392597 RNMTO43148 476 aaKnown RBP25.19■■□□□ 1.62
PTPN11-202ENST00000392597 N4BP2Q86UW6 1770 aaPredicted RBP25.18■■□□□ 1.62
PTPN11-202ENST00000392597 ATP10DQ9P241 1426 aa25.18■■□□□ 1.62
PTPN11-202ENST00000392597 EIF4A1P60842 406 aaKnown RBP25.17■■□□□ 1.62
PTPN11-202ENST00000392597 FLIIQ13045 1269 aa25.17■■□□□ 1.62
PTPN11-202ENST00000392597 RPAP2Q8IXW5 612 aaPredicted RBP25.17■■□□□ 1.62
PTPN11-202ENST00000392597 PXDNLA1KZ92 1463 aa25.16■■□□□ 1.62
PTPN11-202ENST00000392597 SIPA1L3O60292 1781 aaPredicted RBP25.16■■□□□ 1.62
PTPN11-202ENST00000392597 ANKRD44Q8N8A2 993 aa25.16■■□□□ 1.62
PTPN11-202ENST00000392597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.16■■□□□ 1.627e-7■■□□□ 12.5
PTPN11-202ENST00000392597 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
PTPN11-202ENST00000392597 RAPGEF4Q8WZA2 1011 aa25.15■■□□□ 1.62
PTPN11-202ENST00000392597 HDGFL1Q5TGJ6 251 aa25.15■■□□□ 1.62
PTPN11-202ENST00000392597 BTBD11A6QL63 1104 aa25.14■■□□□ 1.61
PTPN11-202ENST00000392597 NLRP2Q9NX02 1062 aa25.14■■□□□ 1.61
PTPN11-202ENST00000392597 LNPKQ9C0E8 428 aa25.13■■□□□ 1.61
PTPN11-202ENST00000392597 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
PTPN11-202ENST00000392597 FKBP5Q13451 457 aaPredicted RBP25.12■■□□□ 1.61
PTPN11-202ENST00000392597 MEIS3Q99687 375 aa25.12■■□□□ 1.61
PTPN11-202ENST00000392597 DCTPP1Q9H773 170 aa25.12■■□□□ 1.61
PTPN11-202ENST00000392597 ANKRD45Q5TZF3 282 aa25.11■■□□□ 1.61
PTPN11-202ENST00000392597 CEP85Q6P2H3 762 aa25.11■■□□□ 1.61
PTPN11-202ENST00000392597 NUTM2BA6NNL0 878 aaPredicted RBP25.11■■□□□ 1.61
PTPN11-202ENST00000392597 NUTM2EB1AL46 878 aaPredicted RBP25.11■■□□□ 1.61
PTPN11-202ENST00000392597 F6X3S4 739 aa25.11■■□□□ 1.61
PTPN11-202ENST00000392597 NUTM2AQ8IVF1 878 aaPredicted RBP25.11■■□□□ 1.61
PTPN11-202ENST00000392597 PRDM11Q9NQV5 511 aa25.11■■□□□ 1.61
PTPN11-202ENST00000392597 SPG7Q9UQ90 795 aa25.11■■□□□ 1.61
PTPN11-202ENST00000392597 LRP6O75581 1613 aa25.1■■□□□ 1.61
PTPN11-202ENST00000392597 SLC4A10Q6U841 1118 aa25.1■■□□□ 1.61
PTPN11-202ENST00000392597 SCN11AQ9UI33 1791 aa25.1■■□□□ 1.61
PTPN11-202ENST00000392597 HEG1Q9ULI3 1381 aa25.1■■□□□ 1.61
PTPN11-202ENST00000392597 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
PTPN11-202ENST00000392597 UPF2Q9HAU5 1272 aaKnown RBP25.09■■□□□ 1.61
PTPN11-202ENST00000392597 MEGF6O75095 1541 aa25.08■■□□□ 1.61
PTPN11-202ENST00000392597 PKD1L3Q7Z443 1732 aa25.08■■□□□ 1.61
PTPN11-202ENST00000392597 NECTIN2Q92692 538 aa25.08■■□□□ 1.61
PTPN11-202ENST00000392597 COL14A1Q05707 1796 aaKnown RBP25.07■■□□□ 1.6
PTPN11-202ENST00000392597 ADAMTS2O95450 1211 aa25.07■■□□□ 1.6
PTPN11-202ENST00000392597 SEC24BO95487 1268 aa25.07■■□□□ 1.6
PTPN11-202ENST00000392597 CHRNA2Q15822 529 aa25.07■■□□□ 1.6
PTPN11-202ENST00000392597 HMMRO75330 724 aa25.06■■□□□ 1.6
PTPN11-202ENST00000392597 GNAI3P08754 354 aa25.06■■□□□ 1.6
PTPN11-202ENST00000392597 KCNQ3O43525 872 aa25.06■■□□□ 1.6
PTPN11-202ENST00000392597 BMP2KLQ5H9B9 411 aa25.05■■□□□ 1.6
PTPN11-202ENST00000392597 GNAI2P04899 355 aa25.04■■□□□ 1.6
PTPN11-202ENST00000392597 PHKG2P15735 406 aa25.04■■□□□ 1.6
PTPN11-202ENST00000392597 IFNL2Q8IZJ0 200 aa25.03■■□□□ 1.6
PTPN11-202ENST00000392597 KDM6AO15550 1401 aaPredicted RBP25.03■■□□□ 1.6
PTPN11-202ENST00000392597 GIGYF1O75420 1035 aaPredicted RBP25.02■■□□□ 1.6
PTPN11-202ENST00000392597 EIF2S2P20042 333 aaKnown RBP25.02■■□□□ 1.6
PTPN11-202ENST00000392597 MRC1P22897 1456 aa25.02■■□□□ 1.6
PTPN11-202ENST00000392597 CHPF2Q9P2E5 772 aa25.02■■□□□ 1.6
PTPN11-202ENST00000392597 PLCH1Q4KWH8 1693 aa25.01■■□□□ 1.59
PTPN11-202ENST00000392597 TBC1D32Q96NH3 1257 aa25.01■■□□□ 1.59
PTPN11-202ENST00000392597 PHAXQ9H814 394 aaKnown RBP25.01■■□□□ 1.59
PTPN11-202ENST00000392597 SLC52A2Q9HAB3 445 aa25.01■■□□□ 1.59
PTPN11-202ENST00000392597 DBF4Q9UBU7 674 aaPredicted RBP25.01■■□□□ 1.59
PTPN11-202ENST00000392597 ILDR1Q86SU0 546 aaPredicted RBP25■■□□□ 1.59
PTPN11-202ENST00000392597 WDR17Q8IZU2 1322 aa25■■□□□ 1.59
PTPN11-202ENST00000392597 PARP4Q9UKK3 1724 aaKnown RBP25■■□□□ 1.59
PTPN11-202ENST00000392597 HSP90AB1P08238 724 aaKnown RBP25■■□□□ 1.59
PTPN11-202ENST00000392597 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
PTPN11-202ENST00000392597 SLIT2O94813 1529 aa24.99■■□□□ 1.59
PTPN11-202ENST00000392597 DCAF5Q96JK2 942 aa24.99■■□□□ 1.59
PTPN11-202ENST00000392597 MEX3CQ5U5Q3 659 aaKnown RBP24.98■■□□□ 1.59
PTPN11-202ENST00000392597 COL5A2P05997 1499 aaPredicted RBP24.98■■□□□ 1.59
PTPN11-202ENST00000392597 C8orf37Q96NL8 207 aa24.98■■□□□ 1.59
PTPN11-202ENST00000392597 BTG4Q9NY30 223 aa24.97■■□□□ 1.59
PTPN11-202ENST00000392597 DAXXQ9UER7 740 aaPredicted RBP24.97■■□□□ 1.59
PTPN11-202ENST00000392597 ZNF790Q6PG37 636 aa24.96■■□□□ 1.59
PTPN11-202ENST00000392597 SRCIN1Q9C0H9 1055 aa24.96■■□□□ 1.59
PTPN11-202ENST00000392597 FNBP4Q8N3X1 1017 aaPredicted RBP24.96■■□□□ 1.59
PTPN11-202ENST00000392597 DNAAF4Q8WXU2 420 aa24.96■■□□□ 1.59
PTPN11-202ENST00000392597 NGLY1Q96IV0 654 aa24.96■■□□□ 1.59
PTPN11-202ENST00000392597 USP44Q9H0E7 712 aa24.96■■□□□ 1.59
PTPN11-202ENST00000392597 CYP27B1O15528 508 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms