RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
SNX9-201ENST00000392185 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.9■□□□□ 0.78
SNX9-201ENST00000392185 ERVK-7P63135 1459 aa19.89■□□□□ 0.78
SNX9-201ENST00000392185 SBNO2Q9Y2G9 1366 aa19.89■□□□□ 0.78
SNX9-201ENST00000392185 MSNP26038 577 aaKnown RBP19.89■□□□□ 0.78
SNX9-201ENST00000392185 NUCB2P80303 420 aa19.89■□□□□ 0.77
SNX9-201ENST00000392185 COPS6Q7L5N1 327 aa19.89■□□□□ 0.77
SNX9-201ENST00000392185 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
SNX9-201ENST00000392185 XAGE3Q8WTP9 111 aa19.88■□□□□ 0.77
SNX9-201ENST00000392185 MTMR7Q9Y216 660 aa19.88■□□□□ 0.77
SNX9-201ENST00000392185 HECW2Q9P2P5 1572 aa19.88■□□□□ 0.77
SNX9-201ENST00000392185 ARHGAP45Q92619 1136 aa19.88■□□□□ 0.77
SNX9-201ENST00000392185 UPF3BQ9BZI7 483 aaKnown RBP19.88■□□□□ 0.77
SNX9-201ENST00000392185 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
SNX9-201ENST00000392185 ACSBG1Q96GR2 724 aa19.87■□□□□ 0.77
SNX9-201ENST00000392185 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
SNX9-201ENST00000392185 PIK3R4Q99570 1358 aa19.87■□□□□ 0.77
SNX9-201ENST00000392185 GOLGA6L6A8MZA4 724 aa19.86■□□□□ 0.77
SNX9-201ENST00000392185 RRP12Q5JTH9 1297 aaKnown RBP19.86■□□□□ 0.77
SNX9-201ENST00000392185 G2E3Q7L622 706 aa19.86■□□□□ 0.77
SNX9-201ENST00000392185 NBPF6Q5VWK0 638 aa19.86■□□□□ 0.77
SNX9-201ENST00000392185 NBPF4Q96M43 638 aa19.86■□□□□ 0.77
SNX9-201ENST00000392185 LGR6Q9HBX8 967 aa19.86■□□□□ 0.77
SNX9-201ENST00000392185 NRDCO43847 1150 aa19.85■□□□□ 0.77
SNX9-201ENST00000392185 TRMT112Q9UI30 125 aaKnown RBP19.85■□□□□ 0.77
SNX9-201ENST00000392185 HIP1O00291 1037 aa19.85■□□□□ 0.77
SNX9-201ENST00000392185 ROBO2Q9HCK4 1378 aa19.85■□□□□ 0.77
SNX9-201ENST00000392185 KDM5CP41229 1560 aa19.84■□□□□ 0.77
SNX9-201ENST00000392185 PSMA5P28066 241 aa19.84■□□□□ 0.77
SNX9-201ENST00000392185 METTL24Q5JXM2 366 aa19.84■□□□□ 0.77
SNX9-201ENST00000392185 PHAXQ9H814 394 aaKnown RBP19.84■□□□□ 0.77
SNX9-201ENST00000392185 AMOTL1Q8IY63 956 aa19.84■□□□□ 0.77
SNX9-201ENST00000392185 GLRX3O76003 335 aaKnown RBP19.84■□□□□ 0.77
SNX9-201ENST00000392185 STK3Q13188 491 aa19.84■□□□□ 0.77
SNX9-201ENST00000392185 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
SNX9-201ENST00000392185 DHX16O60231 1041 aaKnown RBP19.83■□□□□ 0.77
SNX9-201ENST00000392185 EFCAB6Q5THR3 1501 aa19.83■□□□□ 0.77
SNX9-201ENST00000392185 ABCC3O15438 1527 aa19.83■□□□□ 0.76
SNX9-201ENST00000392185 PRR36Q9H6K5 1346 aa19.83■□□□□ 0.76
SNX9-201ENST00000392185 TOM1O60784 492 aa19.83■□□□□ 0.76
SNX9-201ENST00000392185 IDH1O75874 414 aaKnown RBP19.82■□□□□ 0.76
SNX9-201ENST00000392185 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 ERICH2A1L162 156 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 CREBRFQ8IUR6 639 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 C16orf71Q8IYS4 520 aaPredicted RBP19.82■□□□□ 0.76
SNX9-201ENST00000392185 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 TRIM29Q14134 588 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 SKOR2Q2VWA4 1001 aaPredicted RBP19.82■□□□□ 0.76
SNX9-201ENST00000392185 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
SNX9-201ENST00000392185 RAB11FIP3O75154 756 aa19.81■□□□□ 0.76
SNX9-201ENST00000392185 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
SNX9-201ENST00000392185 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
SNX9-201ENST00000392185 CWF19L2Q2TBE0 894 aaKnown RBP19.81■□□□□ 0.76
SNX9-201ENST00000392185 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
SNX9-201ENST00000392185 IL2RBP14784 551 aa19.81■□□□□ 0.76
SNX9-201ENST00000392185 CHMP4CQ96CF2 233 aa19.81■□□□□ 0.76
SNX9-201ENST00000392185 K7ELQ4 463 aaPredicted RBP19.8■□□□□ 0.76
SNX9-201ENST00000392185 HDAC1Q13547 482 aaPredicted RBP19.8■□□□□ 0.76
SNX9-201ENST00000392185 BTG4Q9NY30 223 aa19.8■□□□□ 0.76
SNX9-201ENST00000392185 CYP46A1Q9Y6A2 500 aa19.8■□□□□ 0.76
SNX9-201ENST00000392185 IFIT5Q13325 482 aaKnown RBP19.8■□□□□ 0.76
SNX9-201ENST00000392185 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
SNX9-201ENST00000392185 ABCF2Q9UG63 623 aa19.8■□□□□ 0.76
SNX9-201ENST00000392185 LRRIQ1Q96JM4 1722 aa19.8■□□□□ 0.76
SNX9-201ENST00000392185 MARCH6O60337 910 aa19.8■□□□□ 0.76
SNX9-201ENST00000392185 ANKRD44Q8N8A2 993 aa19.8■□□□□ 0.76
SNX9-201ENST00000392185 RNMTO43148 476 aaKnown RBP19.79■□□□□ 0.76
SNX9-201ENST00000392185 PHF14O94880 888 aa19.79■□□□□ 0.76
SNX9-201ENST00000392185 VPS53Q5VIR6 699 aa19.79■□□□□ 0.76
SNX9-201ENST00000392185 ZBTB40Q9NUA8 1239 aa19.79■□□□□ 0.76
SNX9-201ENST00000392185 SLAIN2Q9P270 581 aa19.79■□□□□ 0.76
SNX9-201ENST00000392185 PPP1R1BQ9UD71 204 aaPredicted RBP19.79■□□□□ 0.76
SNX9-201ENST00000392185 MYOM2P54296 1465 aa19.79■□□□□ 0.76
SNX9-201ENST00000392185 SAMD1Q6SPF0 538 aaPredicted RBP19.79■□□□□ 0.76
SNX9-201ENST00000392185 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
SNX9-201ENST00000392185 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.78■□□□□ 0.76
SNX9-201ENST00000392185 CHL1O00533 1208 aa19.78■□□□□ 0.76
SNX9-201ENST00000392185 SNRKQ9NRH2 765 aa19.78■□□□□ 0.76
SNX9-201ENST00000392185 PLXNC1O60486 1568 aa19.77■□□□□ 0.76
SNX9-201ENST00000392185 IGHMBP2P38935 993 aaKnown RBP19.77■□□□□ 0.76
SNX9-201ENST00000392185 CCDC34Q96HJ3 373 aa19.77■□□□□ 0.76
SNX9-201ENST00000392185 PA2G4Q9UQ80 394 aaKnown RBP19.77■□□□□ 0.76
SNX9-201ENST00000392185 BLOC1S2Q6QNY1 142 aa19.77■□□□□ 0.76
SNX9-201ENST00000392185 KSR2Q6VAB6 950 aa19.77■□□□□ 0.76
SNX9-201ENST00000392185 TRIM34Q9BYJ4 488 aa19.77■□□□□ 0.76
SNX9-201ENST00000392185 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.77■□□□□ 0.766e-7■■■□□ 18
SNX9-201ENST00000392185 CWC25Q9NXE8 425 aaPredicted RBP19.77■□□□□ 0.76
SNX9-201ENST00000392185 ATP2B1P20020 1258 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 MCM2P49736 904 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 NUCB1Q02818 461 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 RHPN1Q8TCX5 695 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 BMP2KLQ5H9B9 411 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 DDB1Q16531 1140 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 GNL3LQ9NVN8 582 aaKnown RBP19.76■□□□□ 0.75
SNX9-201ENST00000392185 IFIT1P09914 478 aaKnown RBP19.76■□□□□ 0.75
SNX9-201ENST00000392185 KIAA2012Q0VF49 1180 aa19.76■□□□□ 0.75
SNX9-201ENST00000392185 PLEKHG1Q9ULL1 1385 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 ARAP3Q8WWN8 1544 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 FIBPO43427 364 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms