RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 RBM42Q9BTD8 480 aaKnown RBP26.26■■□□□ 1.79
PDCD2-202ENST00000392090 COL23A1Q86Y22 540 aaPredicted RBP26.25■■□□□ 1.79
PDCD2-202ENST00000392090 FLAD1Q8NFF5 587 aa26.25■■□□□ 1.79
PDCD2-202ENST00000392090 C4BP0C0L5 1744 aa26.25■■□□□ 1.79
PDCD2-202ENST00000392090 POLD1P28340 1107 aa26.24■■□□□ 1.79
PDCD2-202ENST00000392090 SGIP1Q9BQI5 828 aa26.24■■□□□ 1.79
PDCD2-202ENST00000392090 LINC00116Q8NCU8 138 aa26.23■■□□□ 1.79
PDCD2-202ENST00000392090 ARXQ96QS3 562 aa26.23■■□□□ 1.79
PDCD2-202ENST00000392090 SCN11AQ9UI33 1791 aa26.23■■□□□ 1.79
PDCD2-202ENST00000392090 ITPK1Q13572 414 aa26.22■■□□□ 1.79
PDCD2-202ENST00000392090 LGR6Q9HBX8 967 aa26.22■■□□□ 1.79
PDCD2-202ENST00000392090 U2AF1L5P0DN76 240 aaPredicted RBP26.21■■□□□ 1.79
PDCD2-202ENST00000392090 U2AF1Q01081 240 aaKnown RBP eCLIP26.21■■□□□ 1.79
PDCD2-202ENST00000392090 DDX10Q13206 875 aaKnown RBP26.21■■□□□ 1.79
PDCD2-202ENST00000392090 RNMTO43148 476 aaKnown RBP26.2■■□□□ 1.78
PDCD2-202ENST00000392090 PHF14O94880 888 aa26.2■■□□□ 1.78
PDCD2-202ENST00000392090 GAS2L2Q8NHY3 880 aa26.2■■□□□ 1.78
PDCD2-202ENST00000392090 PTCD1O75127 700 aaKnown RBP26.19■■□□□ 1.78
PDCD2-202ENST00000392090 FHDC1Q9C0D6 1143 aaPredicted RBP26.19■■□□□ 1.78
PDCD2-202ENST00000392090 SLC52A2Q9HAB3 445 aa26.19■■□□□ 1.78
PDCD2-202ENST00000392090 DCAF8L1A6NGE4 600 aa26.18■■□□□ 1.78
PDCD2-202ENST00000392090 GNPATO15228 680 aa26.18■■□□□ 1.78
PDCD2-202ENST00000392090 PRKAR2BP31323 418 aa26.18■■□□□ 1.78
PDCD2-202ENST00000392090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.17■■□□□ 1.78
PDCD2-202ENST00000392090 ZEB1P37275 1124 aaPredicted RBP26.17■■□□□ 1.78
PDCD2-202ENST00000392090 SLC4A9Q96Q91 983 aa26.17■■□□□ 1.78
PDCD2-202ENST00000392090 RSPH6AQ9H0K4 717 aa26.17■■□□□ 1.78
PDCD2-202ENST00000392090 SSFA2P28290 1259 aa26.16■■□□□ 1.78
PDCD2-202ENST00000392090 MSL1Q68DK7 614 aa26.16■■□□□ 1.78
PDCD2-202ENST00000392090 UBR3Q6ZT12 1888 aa26.16■■□□□ 1.78
PDCD2-202ENST00000392090 VIRMAQ69YN4 1812 aaKnown RBP26.16■■□□□ 1.78
PDCD2-202ENST00000392090 GNAT3A8MTJ3 354 aa26.15■■□□□ 1.78
PDCD2-202ENST00000392090 SMIM5Q71RC9 77 aa26.15■■□□□ 1.78
PDCD2-202ENST00000392090 AMIGO3Q86WK7 504 aa26.15■■□□□ 1.78
PDCD2-202ENST00000392090 SYT17Q9BSW7 474 aa26.15■■□□□ 1.78
PDCD2-202ENST00000392090 MAP3K5Q99683 1374 aa26.15■■□□□ 1.78
PDCD2-202ENST00000392090 KLHL34Q8N239 644 aa26.14■■□□□ 1.78
PDCD2-202ENST00000392090 ZNF831Q5JPB2 1677 aa26.13■■□□□ 1.77
PDCD2-202ENST00000392090 FCHSD2O94868 740 aa26.13■■□□□ 1.77
PDCD2-202ENST00000392090 PHACTR3Q96KR7 559 aa26.13■■□□□ 1.77
PDCD2-202ENST00000392090 MRC1P22897 1456 aa26.12■■□□□ 1.77
PDCD2-202ENST00000392090 COL24A1Q17RW2 1714 aa26.12■■□□□ 1.77
PDCD2-202ENST00000392090 RTCBQ9Y3I0 505 aaKnown RBP26.12■■□□□ 1.77
PDCD2-202ENST00000392090 TEFQ10587 303 aa26.11■■□□□ 1.77
PDCD2-202ENST00000392090 RALBP1Q15311 655 aa26.11■■□□□ 1.77
PDCD2-202ENST00000392090 SLC39A6Q13433 755 aa26.1■■□□□ 1.77
PDCD2-202ENST00000392090 RC3H1Q5TC82 1133 aaKnown RBP26.1■■□□□ 1.77
PDCD2-202ENST00000392090 CNTNAP4Q9C0A0 1308 aa26.1■■□□□ 1.77
PDCD2-202ENST00000392090 ADAMTS7Q9UKP4 1686 aa26.09■■□□□ 1.77
PDCD2-202ENST00000392090 IL17REQ8NFR9 667 aa26.09■■□□□ 1.77
PDCD2-202ENST00000392090 TRAPPC3LQ5T215 181 aa26.08■■□□□ 1.77
PDCD2-202ENST00000392090 COL5A3P25940 1745 aaPredicted RBP26.08■■□□□ 1.76
PDCD2-202ENST00000392090 NEFMP07197 916 aa26.07■■□□□ 1.76
PDCD2-202ENST00000392090 TTC5Q8N0Z6 440 aa26.06■■□□□ 1.76
PDCD2-202ENST00000392090 RPS6KA4O75676 772 aa26.05■■□□□ 1.76
PDCD2-202ENST00000392090 CRKLP46109 303 aaKnown RBP26.05■■□□□ 1.76
PDCD2-202ENST00000392090 RTF1Q92541 710 aaKnown RBP26.05■■□□□ 1.76
PDCD2-202ENST00000392090 ADRA2BP18089 450 aa26.04■■□□□ 1.76
PDCD2-202ENST00000392090 MYH14Q7Z406 1995 aaKnown RBP26.04■■□□□ 1.76
PDCD2-202ENST00000392090 DNAJC10Q8IXB1 793 aa26.03■■□□□ 1.76
PDCD2-202ENST00000392090 TJP1Q07157 1748 aa26.02■■□□□ 1.76
PDCD2-202ENST00000392090 RFC4P35249 363 aa26.02■■□□□ 1.76
PDCD2-202ENST00000392090 ARHGEF1Q92888 912 aaKnown RBP26.02■■□□□ 1.76
PDCD2-202ENST00000392090 KCPQ6ZWJ8 1503 aa26■■□□□ 1.75
PDCD2-202ENST00000392090 CEMIPQ8WUJ3 1361 aa26■■□□□ 1.75
PDCD2-202ENST00000392090 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
PDCD2-202ENST00000392090 VSIG10Q8N0Z9 540 aa26■■□□□ 1.75
PDCD2-202ENST00000392090 PNNQ9H307 717 aaKnown RBP26■■□□□ 1.75
PDCD2-202ENST00000392090 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
PDCD2-202ENST00000392090 ZNF790Q6PG37 636 aa25.99■■□□□ 1.75
PDCD2-202ENST00000392090 CCDC87Q9NVE4 849 aa25.99■■□□□ 1.75
PDCD2-202ENST00000392090 INTS5Q6P9B9 1019 aaKnown RBP25.98■■□□□ 1.75
PDCD2-202ENST00000392090 MCM10Q7L590 875 aa25.98■■□□□ 1.75
PDCD2-202ENST00000392090 UTRNP46939 3433 aa25.97■■□□□ 1.75
PDCD2-202ENST00000392090 BTBD11A6QL63 1104 aa25.97■■□□□ 1.75
PDCD2-202ENST00000392090 CYP19A1P11511 503 aaPredicted RBP25.97■■□□□ 1.75
PDCD2-202ENST00000392090 NLGN1Q8N2Q7 840 aa25.97■■□□□ 1.75
PDCD2-202ENST00000392090 NLGN2Q8NFZ4 835 aa25.97■■□□□ 1.75
PDCD2-202ENST00000392090 SIPA1L3O60292 1781 aaPredicted RBP25.97■■□□□ 1.75
PDCD2-202ENST00000392090 MAPK8IP3Q9UPT6 1336 aa25.96■■□□□ 1.75
PDCD2-202ENST00000392090 HTATSF1O43719 755 aaKnown RBP25.96■■□□□ 1.75
PDCD2-202ENST00000392090 GPR162Q16538 588 aa25.96■■□□□ 1.75
PDCD2-202ENST00000392090 ZNF496Q96IT1 587 aaPredicted RBP25.96■■□□□ 1.75
PDCD2-202ENST00000392090 UBR2Q8IWV8 1755 aa25.96■■□□□ 1.75
PDCD2-202ENST00000392090 MMP10P09238 476 aa25.95■■□□□ 1.74
PDCD2-202ENST00000392090 PELP1Q8IZL8 1130 aaKnown RBP25.95■■□□□ 1.74
PDCD2-202ENST00000392090 CD2APQ9Y5K6 639 aa25.95■■□□□ 1.74
PDCD2-202ENST00000392090 STARD3NLO95772 234 aa25.94■■□□□ 1.74
PDCD2-202ENST00000392090 DCTN1Q14203 1278 aa25.94■■□□□ 1.74
PDCD2-202ENST00000392090 FMNL2Q96PY5 1086 aa25.94■■□□□ 1.74
PDCD2-202ENST00000392090 PLEKHF1Q96S99 279 aa25.94■■□□□ 1.74
PDCD2-202ENST00000392090 GOLGB1Q14789 3259 aaKnown RBP25.94■■□□□ 1.74
PDCD2-202ENST00000392090 GYS1P13807 737 aa25.93■■□□□ 1.74
PDCD2-202ENST00000392090 TEX13AQ9BXU3 409 aaPredicted RBP25.92■■□□□ 1.74
PDCD2-202ENST00000392090 HEG1Q9ULI3 1381 aa25.92■■□□□ 1.74
PDCD2-202ENST00000392090 C4AP0C0L4 1744 aa25.91■■□□□ 1.74
PDCD2-202ENST00000392090 YY1P25490 414 aa25.91■■□□□ 1.74
PDCD2-202ENST00000392090 NFE2L2Q16236 605 aa25.91■■□□□ 1.74
PDCD2-202ENST00000392090 SRP68Q9UHB9 627 aaKnown RBP25.91■■□□□ 1.74
PDCD2-202ENST00000392090 ZBTB1Q9Y2K1 713 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms