RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 HSPA6P17066 643 aa13.21□□□□□ -0.29
TPM3P6-201ENST00000391998 RFC4P35249 363 aa13.21□□□□□ -0.29
TPM3P6-201ENST00000391998 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
TPM3P6-201ENST00000391998 MMP10P09238 476 aa13.2□□□□□ -0.3
TPM3P6-201ENST00000391998 CABP4P57796 275 aa13.2□□□□□ -0.3
TPM3P6-201ENST00000391998 MTHFSP49914 203 aa13.19□□□□□ -0.3
TPM3P6-201ENST00000391998 ITPK1Q13572 414 aa13.19□□□□□ -0.3
TPM3P6-201ENST00000391998 PARP3Q9Y6F1 533 aa13.19□□□□□ -0.3
TPM3P6-201ENST00000391998 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
TPM3P6-201ENST00000391998 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
TPM3P6-201ENST00000391998 KDRP35968 1356 aa13.18□□□□□ -0.3
TPM3P6-201ENST00000391998 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
TPM3P6-201ENST00000391998 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
TPM3P6-201ENST00000391998 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
TPM3P6-201ENST00000391998 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 C5P01031 1676 aa13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 TOMM70O94826 608 aa13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 APLP1P51693 650 aa13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 PANK3Q9H999 370 aa13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
TPM3P6-201ENST00000391998 GYS1P13807 737 aa13.15□□□□□ -0.3
TPM3P6-201ENST00000391998 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
TPM3P6-201ENST00000391998 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
TPM3P6-201ENST00000391998 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
TPM3P6-201ENST00000391998 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
TPM3P6-201ENST00000391998 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
TPM3P6-201ENST00000391998 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
TPM3P6-201ENST00000391998 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
TPM3P6-201ENST00000391998 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
TPM3P6-201ENST00000391998 C10orf71Q711Q0 1435 aa13.13□□□□□ -0.31
TPM3P6-201ENST00000391998 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 KIF3CO14782 793 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 ZPR1O75312 459 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 FCHSD2O94868 740 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
TPM3P6-201ENST00000391998 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 FSTL1Q12841 308 aa13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 USP42Q9H9J4 1324 aaKnown RBP13.11□□□□□ -0.31
TPM3P6-201ENST00000391998 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
TPM3P6-201ENST00000391998 DPEP1P16444 411 aa13.1□□□□□ -0.31
TPM3P6-201ENST00000391998 IL13P35225 146 aa13.1□□□□□ -0.31
TPM3P6-201ENST00000391998 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
TPM3P6-201ENST00000391998 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
TPM3P6-201ENST00000391998 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
TPM3P6-201ENST00000391998 HSPA5P11021 654 aaKnown RBP13.09□□□□□ -0.31
TPM3P6-201ENST00000391998 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
TPM3P6-201ENST00000391998 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
TPM3P6-201ENST00000391998 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
TPM3P6-201ENST00000391998 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
TPM3P6-201ENST00000391998 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
TPM3P6-201ENST00000391998 A0A087WZG4 1122 aa13.08□□□□□ -0.32
TPM3P6-201ENST00000391998 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
TPM3P6-201ENST00000391998 STARD3NLO95772 234 aa13.07□□□□□ -0.32
TPM3P6-201ENST00000391998 TM4SF1P30408 202 aa13.07□□□□□ -0.32
TPM3P6-201ENST00000391998 MAP2P11137 1827 aaKnown RBP13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 TOGARAM1Q9Y4F4 1720 aa13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 KCNA3P22001 575 aa13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
TPM3P6-201ENST00000391998 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
TPM3P6-201ENST00000391998 FKBP8Q14318 412 aa13.05□□□□□ -0.32
TPM3P6-201ENST00000391998 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
TPM3P6-201ENST00000391998 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
TPM3P6-201ENST00000391998 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
TPM3P6-201ENST00000391998 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
TPM3P6-201ENST00000391998 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
TPM3P6-201ENST00000391998 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
TPM3P6-201ENST00000391998 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
TPM3P6-201ENST00000391998 ITGB4P16144 1822 aa13.03□□□□□ -0.32
TPM3P6-201ENST00000391998 RGL2O15211 777 aa13.02□□□□□ -0.33
TPM3P6-201ENST00000391998 LMNB1P20700 586 aa13.02□□□□□ -0.33
TPM3P6-201ENST00000391998 DDR1Q08345 913 aa13.02□□□□□ -0.33
TPM3P6-201ENST00000391998 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
TPM3P6-201ENST00000391998 WWC3Q9ULE0 1092 aa13.02□□□□□ -0.33
TPM3P6-201ENST00000391998 CEP350Q5VT06 3117 aa13.02□□□□□ -0.33
TPM3P6-201ENST00000391998 H0YIN7 160 aa13.01□□□□□ -0.33
TPM3P6-201ENST00000391998 PDE6BP35913 854 aa13.01□□□□□ -0.33
TPM3P6-201ENST00000391998 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms