RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
RNU1-56P-201ENST00000391303 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
RNU1-56P-201ENST00000391303 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
RNU1-56P-201ENST00000391303 QSER1Q2KHR3 1735 aa9.51□□□□□ -0.89
RNU1-56P-201ENST00000391303 KDM6AO15550 1401 aaPredicted RBP9.51□□□□□ -0.89
RNU1-56P-201ENST00000391303 RPS6KA4O75676 772 aa9.51□□□□□ -0.89
RNU1-56P-201ENST00000391303 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
RNU1-56P-201ENST00000391303 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
RNU1-56P-201ENST00000391303 CFAP53Q96M91 514 aa9.5□□□□□ -0.89
RNU1-56P-201ENST00000391303 SLC52A2Q9HAB3 445 aa9.5□□□□□ -0.89
RNU1-56P-201ENST00000391303 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
RNU1-56P-201ENST00000391303 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
RNU1-56P-201ENST00000391303 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
RNU1-56P-201ENST00000391303 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
RNU1-56P-201ENST00000391303 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
RNU1-56P-201ENST00000391303 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
RNU1-56P-201ENST00000391303 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 PHF14O94880 888 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 RFC4P35249 363 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 TGFB2P61812 414 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
RNU1-56P-201ENST00000391303 RGPD2P0DJD1 1756 aa9.47□□□□□ -0.89
RNU1-56P-201ENST00000391303 RNMTO43148 476 aaKnown RBP9.47□□□□□ -0.89
RNU1-56P-201ENST00000391303 MTHFSDQ2M296 383 aaKnown RBP9.47□□□□□ -0.89
RNU1-56P-201ENST00000391303 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
RNU1-56P-201ENST00000391303 ZNF831Q5JPB2 1677 aa9.46□□□□□ -0.89
RNU1-56P-201ENST00000391303 TOGARAM1Q9Y4F4 1720 aa9.46□□□□□ -0.89
RNU1-56P-201ENST00000391303 PTCD1O75127 700 aaKnown RBP9.46□□□□□ -0.9
RNU1-56P-201ENST00000391303 MMP10P09238 476 aa9.46□□□□□ -0.9
RNU1-56P-201ENST00000391303 HMOX1P09601 288 aa9.46□□□□□ -0.9
RNU1-56P-201ENST00000391303 CRKLP46109 303 aaKnown RBP9.46□□□□□ -0.9
RNU1-56P-201ENST00000391303 TEX13AQ9BXU3 409 aaPredicted RBP9.46□□□□□ -0.9
RNU1-56P-201ENST00000391303 MRC1P22897 1456 aa9.46□□□□□ -0.9
RNU1-56P-201ENST00000391303 C5P01031 1676 aa9.45□□□□□ -0.9
RNU1-56P-201ENST00000391303 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
RNU1-56P-201ENST00000391303 FCHSD2O94868 740 aa9.45□□□□□ -0.9
RNU1-56P-201ENST00000391303 GYS1P13807 737 aa9.45□□□□□ -0.9
RNU1-56P-201ENST00000391303 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
RNU1-56P-201ENST00000391303 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 HTATSF1O43719 755 aaKnown RBP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 STARD3NLO95772 234 aa9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 YBX3P16989 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 TEFQ10587 303 aa9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 TTC5Q8N0Z6 440 aa9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 LGR6Q9HBX8 967 aa9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 PARP3Q9Y6F1 533 aa9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 USP42Q9H9J4 1324 aaKnown RBP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 COL3A1P02461 1466 aaPredicted RBP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 MAP2P11137 1827 aaKnown RBP9.44□□□□□ -0.9
RNU1-56P-201ENST00000391303 SOS1Q07889 1333 aaPredicted RBP9.43□□□□□ -0.9
RNU1-56P-201ENST00000391303 CYP19A1P11511 503 aaPredicted RBP9.43□□□□□ -0.9
RNU1-56P-201ENST00000391303 INTS5Q6P9B9 1019 aaKnown RBP9.43□□□□□ -0.9
RNU1-56P-201ENST00000391303 C10orf71Q711Q0 1435 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 CEMIPQ8WUJ3 1361 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 A0A087WZG4 1122 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 ZPR1O75312 459 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 PPP2R1AP30153 589 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 ZNF790Q6PG37 636 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 DNAJC10Q8IXB1 793 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 RSPH6AQ9H0K4 717 aa9.42□□□□□ -0.9
RNU1-56P-201ENST00000391303 RGL2O15211 777 aa9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 TM4SF1P30408 202 aa9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 PRKAR2BP31323 418 aa9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 PNNQ9H307 717 aaKnown RBP9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 NARFQ9UHQ1 456 aa9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
RNU1-56P-201ENST00000391303 NEFMP07197 916 aa9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 FMNL2Q96PY5 1086 aa9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.9
RNU1-56P-201ENST00000391303 PXDNLA1KZ92 1463 aa9.4□□□□□ -0.91
RNU1-56P-201ENST00000391303 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.91
RNU1-56P-201ENST00000391303 ADCY9O60503 1353 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 HEG1Q9ULI3 1381 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 EIF5P55010 431 aaKnown RBP9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 FKBP8Q14318 412 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 ZNF496Q96IT1 587 aaPredicted RBP9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 ITGB4P16144 1822 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
RNU1-56P-201ENST00000391303 COL15A1P39059 1388 aa9.38□□□□□ -0.91
RNU1-56P-201ENST00000391303 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
RNU1-56P-201ENST00000391303 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
RNU1-56P-201ENST00000391303 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
RNU1-56P-201ENST00000391303 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
RNU1-56P-201ENST00000391303 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms