RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 USP17L21D6R901 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 ZNF594Q96JF6 807 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1000P-201ENST00000391066 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 CENPCQ03188 943 aa10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 RNF217Q8TC41 542 aa10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 ZNF358Q9NW07 568 aa10.03□□□□□ -0.8
RNU6-1000P-201ENST00000391066 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
RNU6-1000P-201ENST00000391066 DNMT3LQ9UJW3 386 aa10.02□□□□□ -0.81
RNU6-1000P-201ENST00000391066 BACH1O14867 736 aa10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 PPP1R15AO75807 674 aaPredicted RBP10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ATG7O95352 703 aa10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ZNF787Q6DD87 383 aa10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ANKMY2Q8IV38 441 aa10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ARXQ96QS3 562 aa10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SFI1A8K8P3 1242 aa10□□□□□ -0.81
RNU6-1000P-201ENST00000391066 MAN1A2O60476 641 aa10□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SMTNP53814 917 aa10□□□□□ -0.81
RNU6-1000P-201ENST00000391066 DPYDQ12882 1025 aa10□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ELOAQ14241 798 aaKnown RBP10□□□□□ -0.81
RNU6-1000P-201ENST00000391066 RBM19Q9Y4C8 960 aaKnown RBP10□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SOBPA7XYQ1 873 aa9.99□□□□□ -0.81
RNU6-1000P-201ENST00000391066 M0R2N6 131 aa9.99□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SEC13P55735 322 aa9.99□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.99□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
RNU6-1000P-201ENST00000391066 A6NJY4 79 aa9.98□□□□□ -0.81
RNU6-1000P-201ENST00000391066 MTFR1Q15390 333 aa9.98□□□□□ -0.81
RNU6-1000P-201ENST00000391066 TLR1Q15399 786 aa9.98□□□□□ -0.81
RNU6-1000P-201ENST00000391066 LYSMD3Q7Z3D4 306 aa9.98□□□□□ -0.81
RNU6-1000P-201ENST00000391066 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
RNU6-1000P-201ENST00000391066 NOVA2Q9UNW9 492 aaKnown RBP9.98□□□□□ -0.81
RNU6-1000P-201ENST00000391066 EPHA4P54764 986 aa9.97□□□□□ -0.81
RNU6-1000P-201ENST00000391066 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
RNU6-1000P-201ENST00000391066 FAM200AQ8TCP9 573 aa9.97□□□□□ -0.81
RNU6-1000P-201ENST00000391066 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
RNU6-1000P-201ENST00000391066 CDK2AP1O14519 115 aa9.96□□□□□ -0.82
RNU6-1000P-201ENST00000391066 PPARGC1BQ86YN6 1023 aaKnown RBP9.96□□□□□ -0.82
RNU6-1000P-201ENST00000391066 TNS4Q8IZW8 715 aa9.96□□□□□ -0.82
RNU6-1000P-201ENST00000391066 ZMIZ1Q9ULJ6 1067 aa9.96□□□□□ -0.82
RNU6-1000P-201ENST00000391066 TSEN2Q8NCE0 465 aaKnown RBP9.95□□□□□ -0.82
RNU6-1000P-201ENST00000391066 ACIN1Q9UKV3 1341 aaKnown RBP9.94□□□□□ -0.82
RNU6-1000P-201ENST00000391066 FOXK2Q01167 660 aa9.94□□□□□ -0.82
RNU6-1000P-201ENST00000391066 POU4F2Q12837 409 aa9.94□□□□□ -0.82
RNU6-1000P-201ENST00000391066 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
RNU6-1000P-201ENST00000391066 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
RNU6-1000P-201ENST00000391066 IQSEC3Q9UPP2 1182 aaPredicted RBP9.94□□□□□ -0.82
RNU6-1000P-201ENST00000391066 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
RNU6-1000P-201ENST00000391066 WDR44Q5JSH3 913 aa9.93□□□□□ -0.82
RNU6-1000P-201ENST00000391066 NBPF10Q6P3W6 841 aaKnown RBP9.93□□□□□ -0.82
RNU6-1000P-201ENST00000391066 NBPF15Q8N660 670 aa9.93□□□□□ -0.82
RNU6-1000P-201ENST00000391066 STK32AQ8WU08 396 aa9.93□□□□□ -0.82
RNU6-1000P-201ENST00000391066 USP3Q9Y6I4 520 aa9.93□□□□□ -0.82
RNU6-1000P-201ENST00000391066 RHOQP17081 205 aa9.92□□□□□ -0.82
RNU6-1000P-201ENST00000391066 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
RNU6-1000P-201ENST00000391066 TAS1R3Q7RTX0 852 aa9.92□□□□□ -0.82
RNU6-1000P-201ENST00000391066 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
RNU6-1000P-201ENST00000391066 RHBDD1Q8TEB9 315 aa9.92□□□□□ -0.82
RNU6-1000P-201ENST00000391066 PTSQ03393 145 aa9.91□□□□□ -0.82
RNU6-1000P-201ENST00000391066 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
RNU6-1000P-201ENST00000391066 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
RNU6-1000P-201ENST00000391066 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
RNU6-1000P-201ENST00000391066 TMEM164Q5U3C3 297 aa9.9□□□□□ -0.82
RNU6-1000P-201ENST00000391066 SLC9A9Q8IVB4 645 aa9.9□□□□□ -0.82
RNU6-1000P-201ENST00000391066 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
RNU6-1000P-201ENST00000391066 TSPAN10Q9H1Z9 355 aaPredicted RBP9.9□□□□□ -0.82
RNU6-1000P-201ENST00000391066 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
RNU6-1000P-201ENST00000391066 SLC35F4A4IF30 521 aa9.89□□□□□ -0.83
RNU6-1000P-201ENST00000391066 PHKA2P46019 1235 aa9.88□□□□□ -0.83
RNU6-1000P-201ENST00000391066 SWI5Q1ZZU3 235 aa9.88□□□□□ -0.83
RNU6-1000P-201ENST00000391066 TBCELQ5QJ74 424 aa9.88□□□□□ -0.83
RNU6-1000P-201ENST00000391066 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
RNU6-1000P-201ENST00000391066 C21orf2O43822 256 aa9.87□□□□□ -0.83
RNU6-1000P-201ENST00000391066 LGR5O75473 907 aa9.87□□□□□ -0.83
RNU6-1000P-201ENST00000391066 CSB-PGBD3P0DP91 1061 aa9.87□□□□□ -0.83
RNU6-1000P-201ENST00000391066 TEAD4Q15561 434 aa9.87□□□□□ -0.83
RNU6-1000P-201ENST00000391066 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
RNU6-1000P-201ENST00000391066 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
RNU6-1000P-201ENST00000391066 CCDC155Q8N6L0 562 aa9.86□□□□□ -0.83
RNU6-1000P-201ENST00000391066 GAS2L2Q8NHY3 880 aa9.86□□□□□ -0.83
RNU6-1000P-201ENST00000391066 ZDHHC1Q8WTX9 485 aa9.86□□□□□ -0.83
RNU6-1000P-201ENST00000391066 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
RNU6-1000P-201ENST00000391066 NXF1Q9UBU9 619 aaKnown RBP9.86□□□□□ -0.83
RNU6-1000P-201ENST00000391066 DYRK1BQ9Y463 629 aa9.86□□□□□ -0.83
RNU6-1000P-201ENST00000391066 TMEM88BA6NKF7 163 aa9.85□□□□□ -0.83
RNU6-1000P-201ENST00000391066 WEE1P30291 646 aa9.85□□□□□ -0.83
RNU6-1000P-201ENST00000391066 NOS2P35228 1153 aa9.85□□□□□ -0.83
RNU6-1000P-201ENST00000391066 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
RNU6-1000P-201ENST00000391066 PSMA6P60900 246 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms