RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
SNORA40.4-201ENST00000390971 SMTNP53814 917 aa11.74□□□□□ -0.53
SNORA40.4-201ENST00000390971 PTSQ03393 145 aa11.74□□□□□ -0.53
SNORA40.4-201ENST00000390971 TLR1Q15399 786 aa11.74□□□□□ -0.53
SNORA40.4-201ENST00000390971 FHDC1Q9C0D6 1143 aaPredicted RBP11.74□□□□□ -0.53
SNORA40.4-201ENST00000390971 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
SNORA40.4-201ENST00000390971 SPATA31C2B4DYI2 1134 aa11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 POU4F2Q12837 409 aa11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 WDR44Q5JSH3 913 aa11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 TMEM214Q6NUQ4 689 aaKnown RBP11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 SIX5Q8N196 739 aa11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 KIAA1024Q9UPX6 916 aa11.73□□□□□ -0.53
SNORA40.4-201ENST00000390971 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 NPAS3Q8IXF0 933 aa11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 ZNF775Q96BV0 537 aaPredicted RBP11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 ZNF358Q9NW07 568 aa11.72□□□□□ -0.53
SNORA40.4-201ENST00000390971 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
SNORA40.4-201ENST00000390971 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
SNORA40.4-201ENST00000390971 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.53
SNORA40.4-201ENST00000390971 A6NJY4 79 aa11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 CDK2AP1O14519 115 aa11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 TERTO14746 1132 aaKnown RBP11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 RHOQP17081 205 aa11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 PTK7Q13308 1070 aa11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 NBPF10Q6P3W6 841 aaKnown RBP11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
SNORA40.4-201ENST00000390971 SLC35F4A4IF30 521 aa11.69□□□□□ -0.54
SNORA40.4-201ENST00000390971 M0R2N6 131 aa11.69□□□□□ -0.54
SNORA40.4-201ENST00000390971 MTFR1Q15390 333 aa11.69□□□□□ -0.54
SNORA40.4-201ENST00000390971 CRTC2Q53ET0 693 aaPredicted RBP11.69□□□□□ -0.54
SNORA40.4-201ENST00000390971 CDCA8Q53HL2 280 aa11.69□□□□□ -0.54
SNORA40.4-201ENST00000390971 SEC13P55735 322 aa11.68□□□□□ -0.54
SNORA40.4-201ENST00000390971 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
SNORA40.4-201ENST00000390971 RHBDD1Q8TEB9 315 aa11.68□□□□□ -0.54
SNORA40.4-201ENST00000390971 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L12C9JPN9 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L21D6R901 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 DKK1O94907 266 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 ANKMY2Q8IV38 441 aa11.67□□□□□ -0.54
SNORA40.4-201ENST00000390971 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
SNORA40.4-201ENST00000390971 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
SNORA40.4-201ENST00000390971 TIMMDC1Q9NPL8 285 aa11.66□□□□□ -0.54
SNORA40.4-201ENST00000390971 SCHIP1Q9P0W5 487 aaPredicted RBP11.66□□□□□ -0.54
SNORA40.4-201ENST00000390971 DYRK1BQ9Y463 629 aa11.66□□□□□ -0.54
SNORA40.4-201ENST00000390971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.65□□□□□ -0.54
SNORA40.4-201ENST00000390971 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
SNORA40.4-201ENST00000390971 DPYDQ12882 1025 aa11.65□□□□□ -0.54
SNORA40.4-201ENST00000390971 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
SNORA40.4-201ENST00000390971 PBXIP1Q96AQ6 731 aa11.65□□□□□ -0.54
SNORA40.4-201ENST00000390971 H3BM21 787 aa11.64□□□□□ -0.55
SNORA40.4-201ENST00000390971 C4orf17Q53FE4 359 aa11.64□□□□□ -0.55
SNORA40.4-201ENST00000390971 PHKA2P46019 1235 aa11.63□□□□□ -0.55
SNORA40.4-201ENST00000390971 EPHA4P54764 986 aa11.63□□□□□ -0.55
SNORA40.4-201ENST00000390971 FAM200AQ8TCP9 573 aa11.63□□□□□ -0.55
SNORA40.4-201ENST00000390971 IQSEC3Q9UPP2 1182 aaPredicted RBP11.63□□□□□ -0.55
SNORA40.4-201ENST00000390971 WFS1O76024 890 aa11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 ATG7O95352 703 aa11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 VEGFBP49765 207 aa11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 FOXK2Q01167 660 aa11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 NFX1Q12986 1120 aaKnown RBP11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 TREML4Q6UXN2 200 aa11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 TSEN2Q8NCE0 465 aaKnown RBP11.62□□□□□ -0.55
SNORA40.4-201ENST00000390971 ITGA6P23229 1130 aa11.61□□□□□ -0.55
SNORA40.4-201ENST00000390971 ELOAQ14241 798 aaKnown RBP11.61□□□□□ -0.55
SNORA40.4-201ENST00000390971 ARXQ96QS3 562 aa11.61□□□□□ -0.55
SNORA40.4-201ENST00000390971 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
SNORA40.4-201ENST00000390971 A0A1B0GTH6 734 aa11.6□□□□□ -0.55
SNORA40.4-201ENST00000390971 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
SNORA40.4-201ENST00000390971 F11P03951 625 aa11.6□□□□□ -0.55
SNORA40.4-201ENST00000390971 GAS2L1Q99501 681 aaPredicted RBP11.6□□□□□ -0.55
SNORA40.4-201ENST00000390971 HINFPQ9BQA5 517 aa11.6□□□□□ -0.55
SNORA40.4-201ENST00000390971 NOVA2Q9UNW9 492 aaKnown RBP11.6□□□□□ -0.55
SNORA40.4-201ENST00000390971 SLC9A9Q8IVB4 645 aa11.59□□□□□ -0.55
SNORA40.4-201ENST00000390971 IRF7Q92985 503 aa11.59□□□□□ -0.55
SNORA40.4-201ENST00000390971 USP3Q9Y6I4 520 aa11.59□□□□□ -0.55
SNORA40.4-201ENST00000390971 PLA2G4AP47712 749 aa11.58□□□□□ -0.56
SNORA40.4-201ENST00000390971 RIPOR1Q6ZS17 1223 aa11.58□□□□□ -0.56
SNORA40.4-201ENST00000390971 ZNF295-AS1Q8N0V1 137 aa11.58□□□□□ -0.56
SNORA40.4-201ENST00000390971 NANOS1Q8WY41 292 aaKnown RBP11.58□□□□□ -0.56
SNORA40.4-201ENST00000390971 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
SNORA40.4-201ENST00000390971 H7C1W4 665 aa11.57□□□□□ -0.56
SNORA40.4-201ENST00000390971 TEAD4Q15561 434 aa11.57□□□□□ -0.56
SNORA40.4-201ENST00000390971 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms