RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
TRAV27-201ENST00000390457 REM2Q8IYK8 340 aaPredicted RBP9.8□□□□□ -0.84
TRAV27-201ENST00000390457 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
TRAV27-201ENST00000390457 EYA1Q99502 592 aa9.8□□□□□ -0.84
TRAV27-201ENST00000390457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
TRAV27-201ENST00000390457 LOC102724428A0A0B4J2F2 783 aa9.79□□□□□ -0.84
TRAV27-201ENST00000390457 SSFA2P28290 1259 aa9.79□□□□□ -0.84
TRAV27-201ENST00000390457 SIK1P57059 783 aa9.79□□□□□ -0.84
TRAV27-201ENST00000390457 CDCA8Q53HL2 280 aa9.79□□□□□ -0.84
TRAV27-201ENST00000390457 NSD3Q9BZ95 1437 aa9.79□□□□□ -0.84
TRAV27-201ENST00000390457 ITPK1Q13572 414 aa9.78□□□□□ -0.84
TRAV27-201ENST00000390457 AK7Q96M32 723 aa9.78□□□□□ -0.84
TRAV27-201ENST00000390457 POLKQ9UBT6 870 aa9.78□□□□□ -0.84
TRAV27-201ENST00000390457 ASAP1Q9ULH1 1129 aa9.78□□□□□ -0.84
TRAV27-201ENST00000390457 PHKG2P15735 406 aa9.77□□□□□ -0.85
TRAV27-201ENST00000390457 SLC4A9Q96Q91 983 aa9.77□□□□□ -0.85
TRAV27-201ENST00000390457 SPG7Q9UQ90 795 aa9.77□□□□□ -0.85
TRAV27-201ENST00000390457 IGSF1Q8N6C5 1336 aa9.77□□□□□ -0.85
TRAV27-201ENST00000390457 KDRP35968 1356 aa9.76□□□□□ -0.85
TRAV27-201ENST00000390457 PLEKHG2Q9H7P9 1386 aa9.76□□□□□ -0.85
TRAV27-201ENST00000390457 PHF14O94880 888 aa9.76□□□□□ -0.85
TRAV27-201ENST00000390457 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
TRAV27-201ENST00000390457 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
TRAV27-201ENST00000390457 ATG3Q9NT62 314 aa9.76□□□□□ -0.85
TRAV27-201ENST00000390457 ZBTB12Q9Y330 459 aaPredicted RBP9.76□□□□□ -0.85
TRAV27-201ENST00000390457 PCNTO95613 3336 aa9.76□□□□□ -0.85
TRAV27-201ENST00000390457 CICQ96RK0 1608 aaPredicted RBP9.75□□□□□ -0.85
TRAV27-201ENST00000390457 EIF4A2Q14240 407 aaKnown RBP9.75□□□□□ -0.85
TRAV27-201ENST00000390457 IFFO2Q5TF58 517 aa9.75□□□□□ -0.85
TRAV27-201ENST00000390457 TMOD3Q9NYL9 352 aa9.75□□□□□ -0.85
TRAV27-201ENST00000390457 KIAA1551Q9HCM1 1747 aa9.75□□□□□ -0.85
TRAV27-201ENST00000390457 KIF13BQ9NQT8 1826 aa9.75□□□□□ -0.85
TRAV27-201ENST00000390457 KIF3CO14782 793 aa9.74□□□□□ -0.85
TRAV27-201ENST00000390457 GNPATO15228 680 aa9.74□□□□□ -0.85
TRAV27-201ENST00000390457 PPM1GO15355 546 aaPredicted RBP9.74□□□□□ -0.85
TRAV27-201ENST00000390457 HSPA6P17066 643 aa9.74□□□□□ -0.85
TRAV27-201ENST00000390457 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
TRAV27-201ENST00000390457 FXR2P51116 673 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAV27-201ENST00000390457 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
TRAV27-201ENST00000390457 PXDNLA1KZ92 1463 aa9.73□□□□□ -0.85
TRAV27-201ENST00000390457 ERVV-2B6SEH9 535 aa9.73□□□□□ -0.85
TRAV27-201ENST00000390457 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
TRAV27-201ENST00000390457 MMP10P09238 476 aa9.73□□□□□ -0.85
TRAV27-201ENST00000390457 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
TRAV27-201ENST00000390457 WWC3Q9ULE0 1092 aa9.73□□□□□ -0.85
TRAV27-201ENST00000390457 TIMELESSQ9UNS1 1208 aa9.73□□□□□ -0.85
TRAV27-201ENST00000390457 MYH14Q7Z406 1995 aaKnown RBP9.73□□□□□ -0.85
TRAV27-201ENST00000390457 TGFB2P61812 414 aa9.72□□□□□ -0.85
TRAV27-201ENST00000390457 ARHGEF1Q92888 912 aaKnown RBP9.72□□□□□ -0.85
TRAV27-201ENST00000390457 C10orf71Q711Q0 1435 aa9.72□□□□□ -0.85
TRAV27-201ENST00000390457 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
TRAV27-201ENST00000390457 GYS1P13807 737 aa9.71□□□□□ -0.86
TRAV27-201ENST00000390457 KCNA4P22459 653 aa9.71□□□□□ -0.86
TRAV27-201ENST00000390457 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
TRAV27-201ENST00000390457 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.86
TRAV27-201ENST00000390457 ZNF526Q8TF50 670 aaPredicted RBP9.71□□□□□ -0.86
TRAV27-201ENST00000390457 CNTNAP4Q9C0A0 1308 aa9.71□□□□□ -0.86
TRAV27-201ENST00000390457 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.86
TRAV27-201ENST00000390457 COL5A3P25940 1745 aaPredicted RBP9.7□□□□□ -0.86
TRAV27-201ENST00000390457 A0A0G2JLW4 131 aa9.7□□□□□ -0.86
TRAV27-201ENST00000390457 KCNA3P22001 575 aa9.7□□□□□ -0.86
TRAV27-201ENST00000390457 DCAF5Q96JK2 942 aa9.7□□□□□ -0.86
TRAV27-201ENST00000390457 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
TRAV27-201ENST00000390457 N4BP2Q86UW6 1770 aaPredicted RBP9.7□□□□□ -0.86
TRAV27-201ENST00000390457 BRCA1P38398 1863 aaKnown RBP9.7□□□□□ -0.86
TRAV27-201ENST00000390457 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
TRAV27-201ENST00000390457 HSP90AB1P08238 724 aaKnown RBP9.68□□□□□ -0.86
TRAV27-201ENST00000390457 DPEP1P16444 411 aa9.68□□□□□ -0.86
TRAV27-201ENST00000390457 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
TRAV27-201ENST00000390457 TRIM26Q12899 539 aaPredicted RBP9.68□□□□□ -0.86
TRAV27-201ENST00000390457 AMOTQ4VCS5 1084 aa9.68□□□□□ -0.86
TRAV27-201ENST00000390457 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
TRAV27-201ENST00000390457 DNAJC5GQ8N7S2 189 aa9.68□□□□□ -0.86
TRAV27-201ENST00000390457 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
TRAV27-201ENST00000390457 ZNF530Q6P9A1 599 aaPredicted RBP9.67□□□□□ -0.86
TRAV27-201ENST00000390457 AEBP1Q8IUX7 1158 aa9.67□□□□□ -0.86
TRAV27-201ENST00000390457 PANK3Q9H999 370 aa9.67□□□□□ -0.86
TRAV27-201ENST00000390457 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
TRAV27-201ENST00000390457 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
TRAV27-201ENST00000390457 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
TRAV27-201ENST00000390457 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 CLSPNQ9HAW4 1339 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 TOMM70O94826 608 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 RFC4P35249 363 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 CRKLP46109 303 aaKnown RBP9.66□□□□□ -0.86
TRAV27-201ENST00000390457 CABP4P57796 275 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 DDR1Q08345 913 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 NFATC2IPQ8NCF5 419 aa9.66□□□□□ -0.86
TRAV27-201ENST00000390457 USP42Q9H9J4 1324 aaKnown RBP9.65□□□□□ -0.86
TRAV27-201ENST00000390457 PTCD1O75127 700 aaKnown RBP9.65□□□□□ -0.86
TRAV27-201ENST00000390457 FCHSD2O94868 740 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 TM4SF1P30408 202 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 MTHFSP49914 203 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 FKBP8Q14318 412 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 INTS5Q6P9B9 1019 aaKnown RBP9.65□□□□□ -0.86
TRAV27-201ENST00000390457 ARHGAP27Q6ZUM4 889 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 SRP68Q9UHB9 627 aaKnown RBP9.65□□□□□ -0.86
TRAV27-201ENST00000390457 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
TRAV27-201ENST00000390457 HSPA5P11021 654 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms