RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 TMC1Q8TDI8 760 aa8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 SMARCC1Q92922 1105 aaPredicted RBP8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 MKRN1Q9UHC7 482 aaKnown RBP8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 PCDH11XQ9BZA7 1347 aa8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 PCDH11YQ9BZA8 1340 aa8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 RAPGEF4Q8WZA2 1011 aa8.96□□□□□ -0.98
TRAV1-2-201ENST00000390423 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
TRAV1-2-201ENST00000390423 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 CHRNA5P30532 468 aa8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 TMF1P82094 1093 aa8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 RRS1Q15050 365 aaKnown RBP8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 DALRD3Q5D0E6 543 aaKnown RBP8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 CCDC87Q9NVE4 849 aa8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 CGNL1Q0VF96 1302 aa8.95□□□□□ -0.98
TRAV1-2-201ENST00000390423 TIAM2Q8IVF5 1701 aa8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 POTECB2RU33 542 aa8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 GYS1P13807 737 aa8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 ATP6V1AP38606 617 aa8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 PRDM10Q9NQV6 1147 aa8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 PIM2Q9P1W9 311 aa8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 ROCK2O75116 1388 aaKnown RBP8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 KDM6AO15550 1401 aaPredicted RBP8.94□□□□□ -0.98
TRAV1-2-201ENST00000390423 VEGFAP15692 232 aaPredicted RBP8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 HMGB2P26583 209 aaKnown RBP8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 DDR1Q08345 913 aa8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 NLGN1Q8N2Q7 840 aa8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 ARHGEF1Q92888 912 aaKnown RBP8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 ABHD8Q96I13 439 aa8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 SLC4A9Q96Q91 983 aa8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 KDRP35968 1356 aa8.93□□□□□ -0.98
TRAV1-2-201ENST00000390423 RTL1A6NKG5 1358 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 GLTPD2A6NH11 291 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 LBX1P52954 281 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 HSP90AB2PQ58FF8 381 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 COG3Q96JB2 828 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 PARP3Q9Y6F1 533 aa8.92□□□□□ -0.98
TRAV1-2-201ENST00000390423 COL5A3P25940 1745 aaPredicted RBP8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 CNTNAP1P78357 1384 aa8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 POTEIP0CG38 1075 aa8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 POTEJP0CG39 1038 aa8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 CTCFP49711 727 aaPredicted RBP8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 TRIM26Q12899 539 aaPredicted RBP8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 CREBZFQ9NS37 354 aa8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 TERF2IPQ9NYB0 399 aa8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 SRP68Q9UHB9 627 aaKnown RBP8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 RTCBQ9Y3I0 505 aaKnown RBP8.91□□□□□ -0.98
TRAV1-2-201ENST00000390423 SMG6Q86US8 1419 aaKnown RBP8.9□□□□□ -0.98
TRAV1-2-201ENST00000390423 FKBP8Q14318 412 aa8.9□□□□□ -0.98
TRAV1-2-201ENST00000390423 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
TRAV1-2-201ENST00000390423 TMOD3Q9NYL9 352 aa8.9□□□□□ -0.98
TRAV1-2-201ENST00000390423 MYH14Q7Z406 1995 aaKnown RBP8.9□□□□□ -0.99
TRAV1-2-201ENST00000390423 CCDC88AQ3V6T2 1871 aa8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 ZC3H4Q9UPT8 1303 aaKnown RBP8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 LMNB1P20700 586 aa8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 RFC4P35249 363 aa8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 VEGFBP49765 207 aa8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 MLLT1Q03111 559 aaPredicted RBP8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 VIRMAQ69YN4 1812 aaKnown RBP8.89□□□□□ -0.99
TRAV1-2-201ENST00000390423 INSRP06213 1382 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 CCDC85CA6NKD9 419 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 NFKBIEO00221 500 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 HSPA8P11142 646 aaKnown RBP8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 ADRA2BP18089 450 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 GGNBP2Q9H3C7 697 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 NCAPD2Q15021 1401 aa8.88□□□□□ -0.99
TRAV1-2-201ENST00000390423 CNTNAP4Q9C0A0 1308 aa8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 RPS6KA4O75676 772 aa8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 CHADLQ6NUI6 762 aa8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 RBM42Q9BTD8 480 aaKnown RBP8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 ADAMTS7Q9UKP4 1686 aa8.87□□□□□ -0.99
TRAV1-2-201ENST00000390423 PASKQ96RG2 1323 aa8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 USP42Q9H9J4 1324 aaKnown RBP8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 POLRMTO00411 1230 aaKnown RBP8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 PHKG2P15735 406 aa8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 RGS19P49795 217 aa8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 RC3H1Q5TC82 1133 aaKnown RBP8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 SIN3AQ96ST3 1273 aa8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 FLT4P35916 1363 aa8.86□□□□□ -0.99
TRAV1-2-201ENST00000390423 AFDNP55196 1824 aaKnown RBP8.85□□□□□ -0.99
TRAV1-2-201ENST00000390423 FYB1O15117 783 aa8.85□□□□□ -0.99
TRAV1-2-201ENST00000390423 NEUROD1Q13562 356 aa8.85□□□□□ -0.99
TRAV1-2-201ENST00000390423 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
TRAV1-2-201ENST00000390423 CARMIL3Q8ND23 1372 aa8.85□□□□□ -0.99
TRAV1-2-201ENST00000390423 TM4SF1P30408 202 aa8.84□□□□□ -0.99
TRAV1-2-201ENST00000390423 TJP1Q07157 1748 aa8.84□□□□□ -0.99
TRAV1-2-201ENST00000390423 EMILIN1Q9Y6C2 1016 aa8.84□□□□□ -0.99
TRAV1-2-201ENST00000390423 DDNO94850 711 aaPredicted RBP8.83□□□□□ -1
TRAV1-2-201ENST00000390423 CRKLP46109 303 aaKnown RBP8.83□□□□□ -1
TRAV1-2-201ENST00000390423 NRXN2Q9P2S2 1712 aa8.83□□□□□ -1
TRAV1-2-201ENST00000390423 TNRC18O15417 2968 aaPredicted RBP8.82□□□□□ -1
TRAV1-2-201ENST00000390423 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms