RNA–Protein interactions for RNA: ENST00000388789.4

TTC41P-201, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 1 (best)

Gene TTC41P, Length 1,372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-201ENST00000388789 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
TTC41P-201ENST00000388789 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
TTC41P-201ENST00000388789 MBIPQ9NS73 344 aa10.61□□□□□ -0.71
TTC41P-201ENST00000388789 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
TTC41P-201ENST00000388789 KDRP35968 1356 aa10.6□□□□□ -0.71
TTC41P-201ENST00000388789 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
TTC41P-201ENST00000388789 SOX12O15370 315 aa10.6□□□□□ -0.71
TTC41P-201ENST00000388789 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
TTC41P-201ENST00000388789 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
TTC41P-201ENST00000388789 RNF25Q96BH1 459 aaPredicted RBP10.6□□□□□ -0.71
TTC41P-201ENST00000388789 PCDHB15Q9Y5E8 787 aa10.6□□□□□ -0.71
TTC41P-201ENST00000388789 MARF1Q9Y4F3 1742 aaKnown RBP10.6□□□□□ -0.71
TTC41P-201ENST00000388789 RTL1A6NKG5 1358 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 RGL2O15211 777 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 PSME1Q06323 249 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 TWISTNBQ3B726 338 aaPredicted RBP10.59□□□□□ -0.71
TTC41P-201ENST00000388789 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 IPO9Q96P70 1041 aaKnown RBP10.59□□□□□ -0.71
TTC41P-201ENST00000388789 ANP32EQ9BTT0 268 aa10.59□□□□□ -0.71
TTC41P-201ENST00000388789 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
TTC41P-201ENST00000388789 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 CHL1O00533 1208 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 HTATSF1O43719 755 aaKnown RBP10.58□□□□□ -0.72
TTC41P-201ENST00000388789 HOXC9P31274 260 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
TTC41P-201ENST00000388789 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
TTC41P-201ENST00000388789 ITPRIPQ8IWB1 547 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 GAS2L2Q8NHY3 880 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 EYA1Q99502 592 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 KIAA0232Q92628 1395 aa10.58□□□□□ -0.72
TTC41P-201ENST00000388789 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 C14orf37Q86TY3 774 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 SKAP1Q86WV1 359 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 TMEM57Q8N5G2 664 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 C8orf58Q8NAV2 365 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
TTC41P-201ENST00000388789 RGS3P49796 1198 aa10.56□□□□□ -0.72
TTC41P-201ENST00000388789 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
TTC41P-201ENST00000388789 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
TTC41P-201ENST00000388789 API5Q9BZZ5 524 aaKnown RBP10.56□□□□□ -0.72
TTC41P-201ENST00000388789 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
TTC41P-201ENST00000388789 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
TTC41P-201ENST00000388789 MSH6P52701 1360 aa10.56□□□□□ -0.72
TTC41P-201ENST00000388789 CRB1P82279 1406 aa10.55□□□□□ -0.72
TTC41P-201ENST00000388789 RIOK3O14730 519 aaKnown RBP10.55□□□□□ -0.72
TTC41P-201ENST00000388789 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
TTC41P-201ENST00000388789 NUTM2GQ5VZR2 741 aa10.55□□□□□ -0.72
TTC41P-201ENST00000388789 IP6K1Q92551 441 aa10.55□□□□□ -0.72
TTC41P-201ENST00000388789 OCEL1Q9H607 264 aa10.55□□□□□ -0.72
TTC41P-201ENST00000388789 EMP3P54852 163 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 C8orf34Q49A92 452 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 MCM10Q7L590 875 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 C19orf44Q9H6X5 657 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 NOP58Q9Y2X3 529 aaKnown RBP10.54□□□□□ -0.72
TTC41P-201ENST00000388789 ABCC4O15439 1325 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 NCOA3Q9Y6Q9 1424 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 NFAT5O94916 1531 aa10.54□□□□□ -0.72
TTC41P-201ENST00000388789 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
TTC41P-201ENST00000388789 ELL2O00472 640 aaPredicted RBP10.53□□□□□ -0.72
TTC41P-201ENST00000388789 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
TTC41P-201ENST00000388789 BABAM1Q9NWV8 329 aa10.53□□□□□ -0.72
TTC41P-201ENST00000388789 KIF1AQ12756 1690 aa10.53□□□□□ -0.72
TTC41P-201ENST00000388789 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.72
TTC41P-201ENST00000388789 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.72
TTC41P-201ENST00000388789 NPM2Q86SE8 214 aaKnown RBP10.52□□□□□ -0.72
TTC41P-201ENST00000388789 LTN1O94822 1766 aa10.52□□□□□ -0.72
TTC41P-201ENST00000388789 SOS1Q07889 1333 aaPredicted RBP10.52□□□□□ -0.73
TTC41P-201ENST00000388789 ILDR2Q71H61 639 aa10.52□□□□□ -0.73
TTC41P-201ENST00000388789 SMC5Q8IY18 1101 aa10.52□□□□□ -0.73
TTC41P-201ENST00000388789 ORAI2Q96SN7 254 aa10.52□□□□□ -0.73
TTC41P-201ENST00000388789 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
TTC41P-201ENST00000388789 MST1RQ04912 1400 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 PTPRCP08575 1304 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 ROBO1Q9Y6N7 1651 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 C1orf167Q5SNV9 1468 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 FOXO3O43524 673 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 ATF3P18847 181 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 KRT28Q7Z3Y7 464 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 TSPYL4Q9UJ04 414 aa10.51□□□□□ -0.73
TTC41P-201ENST00000388789 SLIT3O75094 1523 aa10.5□□□□□ -0.73
TTC41P-201ENST00000388789 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
TTC41P-201ENST00000388789 VIRMAQ69YN4 1812 aaKnown RBP10.5□□□□□ -0.73
TTC41P-201ENST00000388789 MAP3K5Q99683 1374 aa10.5□□□□□ -0.73
TTC41P-201ENST00000388789 TPRNQ4KMQ1 711 aa10.5□□□□□ -0.73
TTC41P-201ENST00000388789 INTS3Q68E01 1043 aaKnown RBP10.5□□□□□ -0.73
TTC41P-201ENST00000388789 LTV1Q96GA3 475 aaPredicted RBP10.5□□□□□ -0.73
TTC41P-201ENST00000388789 DCCP43146 1447 aa10.5□□□□□ -0.73
TTC41P-201ENST00000388789 USP19O94966 1318 aa10.49□□□□□ -0.73
TTC41P-201ENST00000388789 TRPM3Q9HCF6 1732 aaPredicted RBP10.49□□□□□ -0.73
TTC41P-201ENST00000388789 LRRC37A3O60309 1634 aa10.49□□□□□ -0.73
TTC41P-201ENST00000388789 GCP02774 474 aa10.49□□□□□ -0.73
TTC41P-201ENST00000388789 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
TTC41P-201ENST00000388789 ARHGEF25Q86VW2 580 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms