RNA–Protein interactions for RNA: ENST00000382490.9

MSRA-202, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-202ENST00000382490 API5Q9BZZ5 524 aaKnown RBP16.74■□□□□ 0.27
MSRA-202ENST00000382490 PKD1L3Q7Z443 1732 aa16.74■□□□□ 0.27
MSRA-202ENST00000382490 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
MSRA-202ENST00000382490 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
MSRA-202ENST00000382490 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
MSRA-202ENST00000382490 ABCC4O15439 1325 aa16.73■□□□□ 0.27
MSRA-202ENST00000382490 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
MSRA-202ENST00000382490 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
MSRA-202ENST00000382490 CCDC30Q5VVM6 783 aa16.73■□□□□ 0.27
MSRA-202ENST00000382490 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
MSRA-202ENST00000382490 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
MSRA-202ENST00000382490 HOXB7P09629 217 aa16.72■□□□□ 0.27
MSRA-202ENST00000382490 PCDH11XQ9BZA7 1347 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
MSRA-202ENST00000382490 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
MSRA-202ENST00000382490 G2E3Q7L622 706 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
MSRA-202ENST00000382490 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
MSRA-202ENST00000382490 PTPRCP08575 1304 aa16.7■□□□□ 0.26
MSRA-202ENST00000382490 IGHDP01880 384 aa16.7■□□□□ 0.26
MSRA-202ENST00000382490 CENPQQ7L2Z9 268 aaPredicted RBP16.7■□□□□ 0.26
MSRA-202ENST00000382490 ZBTB40Q9NUA8 1239 aa16.7■□□□□ 0.26
MSRA-202ENST00000382490 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
MSRA-202ENST00000382490 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
MSRA-202ENST00000382490 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
MSRA-202ENST00000382490 SIPA1L3O60292 1781 aaPredicted RBP16.68■□□□□ 0.26
MSRA-202ENST00000382490 SCN11AQ9UI33 1791 aa16.68■□□□□ 0.26
MSRA-202ENST00000382490 GIGYF1O75420 1035 aaPredicted RBP16.68■□□□□ 0.26
MSRA-202ENST00000382490 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
MSRA-202ENST00000382490 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
MSRA-202ENST00000382490 USP35Q9P2H5 1018 aa16.68■□□□□ 0.26
MSRA-202ENST00000382490 DISP2A7MBM2 1401 aa16.68■□□□□ 0.26
MSRA-202ENST00000382490 RGS12O14924 1447 aa16.68■□□□□ 0.26
MSRA-202ENST00000382490 MRC1P22897 1456 aa16.68■□□□□ 0.26
MSRA-202ENST00000382490 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 CABP4P57796 275 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 DDX54Q8TDD1 881 aaKnown RBP16.67■□□□□ 0.26
MSRA-202ENST00000382490 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 JCADQ9P266 1359 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
MSRA-202ENST00000382490 SLC39A6Q13433 755 aa16.67■□□□□ 0.26
MSRA-202ENST00000382490 EIF2S2P20042 333 aaKnown RBP16.66■□□□□ 0.26
MSRA-202ENST00000382490 FLIIQ13045 1269 aa16.65■□□□□ 0.26
MSRA-202ENST00000382490 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
MSRA-202ENST00000382490 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.26
MSRA-202ENST00000382490 SLIT2O94813 1529 aa16.64■□□□□ 0.25
MSRA-202ENST00000382490 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
MSRA-202ENST00000382490 ZNF496Q96IT1 587 aaPredicted RBP16.63■□□□□ 0.25
MSRA-202ENST00000382490 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
MSRA-202ENST00000382490 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
MSRA-202ENST00000382490 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
MSRA-202ENST00000382490 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
MSRA-202ENST00000382490 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
MSRA-202ENST00000382490 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
MSRA-202ENST00000382490 SHANK3Q9BYB0 1731 aa16.62■□□□□ 0.25
MSRA-202ENST00000382490 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
MSRA-202ENST00000382490 F6X3S4 739 aa16.61■□□□□ 0.25
MSRA-202ENST00000382490 EXOC5O00471 708 aa16.61■□□□□ 0.25
MSRA-202ENST00000382490 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
MSRA-202ENST00000382490 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
MSRA-202ENST00000382490 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
MSRA-202ENST00000382490 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
MSRA-202ENST00000382490 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
MSRA-202ENST00000382490 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
MSRA-202ENST00000382490 SPATA31A6Q5VVP1 1343 aa16.6■□□□□ 0.25
MSRA-202ENST00000382490 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
MSRA-202ENST00000382490 HSPA1LP34931 641 aa16.6■□□□□ 0.25
MSRA-202ENST00000382490 CCT4P50991 539 aaKnown RBP16.6■□□□□ 0.25
MSRA-202ENST00000382490 FKBP5Q13451 457 aaPredicted RBP16.6■□□□□ 0.25
MSRA-202ENST00000382490 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
MSRA-202ENST00000382490 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
MSRA-202ENST00000382490 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
MSRA-202ENST00000382490 CACNA1FO60840 1977 aa16.59■□□□□ 0.25
MSRA-202ENST00000382490 PDIA6Q15084 440 aa16.59■□□□□ 0.25
MSRA-202ENST00000382490 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
MSRA-202ENST00000382490 NGLY1Q96IV0 654 aa16.59■□□□□ 0.25
MSRA-202ENST00000382490 ANXA1P04083 346 aa16.58■□□□□ 0.24
MSRA-202ENST00000382490 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
MSRA-202ENST00000382490 NWD2Q9ULI1 1742 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 VPS72Q15906 364 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 SKAP1Q86WV1 359 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 HYPKQ9NX55 129 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 USP16Q9Y5T5 823 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
MSRA-202ENST00000382490 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
MSRA-202ENST00000382490 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
MSRA-202ENST00000382490 PIGBQ92521 554 aa16.55■□□□□ 0.24
MSRA-202ENST00000382490 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
MSRA-202ENST00000382490 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
MSRA-202ENST00000382490 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
MSRA-202ENST00000382490 MEIS3Q99687 375 aa16.54■□□□□ 0.24
MSRA-202ENST00000382490 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms