RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 KIAA1551Q9HCM1 1747 aa31.28■■■□□ 2.6
VLDLR-201ENST00000382096 COL5A3P25940 1745 aaPredicted RBP31.27■■■□□ 2.6
VLDLR-201ENST00000382096 ITPK1Q13572 414 aa31.27■■■□□ 2.6
VLDLR-201ENST00000382096 GPBP1L1Q9HC44 474 aaPredicted RBP31.27■■■□□ 2.6
VLDLR-201ENST00000382096 GNPATO15228 680 aa31.25■■■□□ 2.59
VLDLR-201ENST00000382096 CCER1Q8TC90 406 aaPredicted RBP31.25■■■□□ 2.59
VLDLR-201ENST00000382096 HSPA5P11021 654 aaKnown RBP31.24■■■□□ 2.59
VLDLR-201ENST00000382096 ATP6V1AP38606 617 aa31.24■■■□□ 2.59
VLDLR-201ENST00000382096 KDRP35968 1356 aa31.24■■■□□ 2.59
VLDLR-201ENST00000382096 ATG3Q9NT62 314 aa31.23■■■□□ 2.59
VLDLR-201ENST00000382096 N4BP2Q86UW6 1770 aaPredicted RBP31.22■■■□□ 2.59
VLDLR-201ENST00000382096 EIF4A2Q14240 407 aaKnown RBP31.22■■■□□ 2.59
VLDLR-201ENST00000382096 WWC3Q9ULE0 1092 aa31.2■■■□□ 2.59
VLDLR-201ENST00000382096 C4AP0C0L4 1744 aa31.18■■■□□ 2.58
VLDLR-201ENST00000382096 PXDNLA1KZ92 1463 aa31.18■■■□□ 2.58
VLDLR-201ENST00000382096 BRCA1P38398 1863 aaKnown RBP31.18■■■□□ 2.58
VLDLR-201ENST00000382096 MMP10P09238 476 aa31.17■■■□□ 2.58
VLDLR-201ENST00000382096 ZNF526Q8TF50 670 aaPredicted RBP31.17■■■□□ 2.58
VLDLR-201ENST00000382096 POLR3GLQ9BT43 218 aa31.17■■■□□ 2.58
VLDLR-201ENST00000382096 MYH14Q7Z406 1995 aaKnown RBP31.16■■■□□ 2.58
VLDLR-201ENST00000382096 ERVV-2B6SEH9 535 aa31.15■■■□□ 2.58
VLDLR-201ENST00000382096 TNNT2P45379 298 aaPredicted RBP31.14■■■□□ 2.58
VLDLR-201ENST00000382096 SLC4A9Q96Q91 983 aa31.13■■■□□ 2.57
VLDLR-201ENST00000382096 PANK3Q9H999 370 aa31.13■■■□□ 2.57
VLDLR-201ENST00000382096 RTCBQ9Y3I0 505 aaKnown RBP31.13■■■□□ 2.57
VLDLR-201ENST00000382096 C10orf71Q711Q0 1435 aa31.13■■■□□ 2.57
VLDLR-201ENST00000382096 HSPA6P17066 643 aa31.12■■■□□ 2.57
VLDLR-201ENST00000382096 DCAF5Q96JK2 942 aa31.12■■■□□ 2.57
VLDLR-201ENST00000382096 KDM6AO15550 1401 aaPredicted RBP31.11■■■□□ 2.57
VLDLR-201ENST00000382096 HSP90AB1P08238 724 aaKnown RBP31.11■■■□□ 2.57
VLDLR-201ENST00000382096 TRAPPC3LQ5T215 181 aa31.11■■■□□ 2.57
VLDLR-201ENST00000382096 CNTNAP4Q9C0A0 1308 aa31.1■■■□□ 2.57
VLDLR-201ENST00000382096 ADRA2BP18089 450 aa31.1■■■□□ 2.57
VLDLR-201ENST00000382096 RC3H1Q5TC82 1133 aaKnown RBP31.1■■■□□ 2.57
VLDLR-201ENST00000382096 NLGN1Q8N2Q7 840 aa31.1■■■□□ 2.57
VLDLR-201ENST00000382096 TGFB2P61812 414 aa31.09■■■□□ 2.57
VLDLR-201ENST00000382096 IFFO2Q5TF58 517 aa31.09■■■□□ 2.57
VLDLR-201ENST00000382096 ARFGEF1Q9Y6D6 1849 aa31.09■■■□□ 2.57
VLDLR-201ENST00000382096 RBM42Q9BTD8 480 aaKnown RBP31.08■■■□□ 2.57
VLDLR-201ENST00000382096 ARHGEF1Q92888 912 aaKnown RBP31.07■■■□□ 2.56
VLDLR-201ENST00000382096 KIF3CO14782 793 aa31.06■■■□□ 2.56
VLDLR-201ENST00000382096 PLEKHO1Q53GL0 409 aaPredicted RBP31.06■■■□□ 2.56
VLDLR-201ENST00000382096 SCN11AQ9UI33 1791 aa31.06■■■□□ 2.56
VLDLR-201ENST00000382096 TJP1Q07157 1748 aa31.06■■■□□ 2.56
VLDLR-201ENST00000382096 RPS6KA4O75676 772 aa31.04■■■□□ 2.56
VLDLR-201ENST00000382096 GYS1P13807 737 aa31.04■■■□□ 2.56
VLDLR-201ENST00000382096 AMOTQ4VCS5 1084 aa31.04■■■□□ 2.56
VLDLR-201ENST00000382096 ZNF530Q6P9A1 599 aaPredicted RBP31.04■■■□□ 2.56
VLDLR-201ENST00000382096 A0A0G2JLW4 131 aa31.02■■■□□ 2.56
VLDLR-201ENST00000382096 RFC4P35249 363 aa31.01■■■□□ 2.55
VLDLR-201ENST00000382096 CABP4P57796 275 aa31.01■■■□□ 2.55
VLDLR-201ENST00000382096 CCDC87Q9NVE4 849 aa31.01■■■□□ 2.55
VLDLR-201ENST00000382096 BCS1LQ9Y276 419 aa31.01■■■□□ 2.55
VLDLR-201ENST00000382096 VIRMAQ69YN4 1812 aaKnown RBP31.01■■■□□ 2.55
VLDLR-201ENST00000382096 ADAMTS7Q9UKP4 1686 aa30.99■■■□□ 2.55
VLDLR-201ENST00000382096 PARP3Q9Y6F1 533 aa30.98■■■□□ 2.55
VLDLR-201ENST00000382096 DPEP1P16444 411 aa30.97■■■□□ 2.55
VLDLR-201ENST00000382096 MTHFSP49914 203 aa30.97■■■□□ 2.55
VLDLR-201ENST00000382096 AEBP1Q8IUX7 1158 aa30.97■■■□□ 2.55
VLDLR-201ENST00000382096 C1orf141Q5JVX7 400 aa30.96■■■□□ 2.55
VLDLR-201ENST00000382096 PTCD1O75127 700 aaKnown RBP30.94■■■□□ 2.54
VLDLR-201ENST00000382096 CRKLP46109 303 aaKnown RBP30.94■■■□□ 2.54
VLDLR-201ENST00000382096 MORC1Q86VD1 984 aa30.94■■■□□ 2.54
VLDLR-201ENST00000382096 ARHGAP27Q6ZUM4 889 aa30.93■■■□□ 2.54
VLDLR-201ENST00000382096 NFATC2IPQ8NCF5 419 aa30.93■■■□□ 2.54
VLDLR-201ENST00000382096 KNSTRNQ9Y448 316 aa30.93■■■□□ 2.54
VLDLR-201ENST00000382096 FCHSD2O94868 740 aa30.92■■■□□ 2.54
VLDLR-201ENST00000382096 KCNA3P22001 575 aa30.92■■■□□ 2.54
VLDLR-201ENST00000382096 KIF7Q2M1P5 1343 aa30.92■■■□□ 2.54
VLDLR-201ENST00000382096 USP42Q9H9J4 1324 aaKnown RBP30.91■■■□□ 2.54
VLDLR-201ENST00000382096 TOMM70O94826 608 aa30.9■■■□□ 2.54
VLDLR-201ENST00000382096 AMER1Q5JTC6 1135 aaPredicted RBP30.9■■■□□ 2.54
VLDLR-201ENST00000382096 SULT6B1Q6IMI4 303 aa30.9■■■□□ 2.54
VLDLR-201ENST00000382096 SBF1O95248 1867 aa30.9■■■□□ 2.54
VLDLR-201ENST00000382096 APLP1P51693 650 aa30.88■■■□□ 2.53
VLDLR-201ENST00000382096 SRP68Q9UHB9 627 aaKnown RBP30.88■■■□□ 2.53
VLDLR-201ENST00000382096 FKBP8Q14318 412 aa30.87■■■□□ 2.53
VLDLR-201ENST00000382096 MRC1P22897 1456 aa30.87■■■□□ 2.53
VLDLR-201ENST00000382096 AFDNP55196 1824 aaKnown RBP30.87■■■□□ 2.53
VLDLR-201ENST00000382096 IL13P35225 146 aa30.86■■■□□ 2.53
VLDLR-201ENST00000382096 DDR1Q08345 913 aa30.86■■■□□ 2.53
VLDLR-201ENST00000382096 PIM2Q9P1W9 311 aa30.86■■■□□ 2.53
VLDLR-201ENST00000382096 WDR90Q96KV7 1748 aa30.86■■■□□ 2.53
VLDLR-201ENST00000382096 NMRK2Q9NPI5 230 aa30.85■■■□□ 2.53
VLDLR-201ENST00000382096 INTS5Q6P9B9 1019 aaKnown RBP30.84■■■□□ 2.53
VLDLR-201ENST00000382096 C9orf131Q5VYM1 1079 aa30.83■■■□□ 2.53
VLDLR-201ENST00000382096 DLEC1Q9Y238 1755 aa30.83■■■□□ 2.53
VLDLR-201ENST00000382096 NRXN2Q9P2S2 1712 aa30.83■■■□□ 2.53
VLDLR-201ENST00000382096 TNRC6CQ9HCJ0 1690 aaKnown RBP30.83■■■□□ 2.53
VLDLR-201ENST00000382096 AKAP4Q5JQC9 854 aa30.82■■■□□ 2.52
VLDLR-201ENST00000382096 DALRD3Q5D0E6 543 aaKnown RBP30.81■■■□□ 2.52
VLDLR-201ENST00000382096 UBR2Q8IWV8 1755 aa30.8■■■□□ 2.52
VLDLR-201ENST00000382096 POLRMTO00411 1230 aaKnown RBP30.8■■■□□ 2.52
VLDLR-201ENST00000382096 PER1O15534 1290 aaPredicted RBP30.8■■■□□ 2.52
VLDLR-201ENST00000382096 SLC52A2Q9HAB3 445 aa30.8■■■□□ 2.52
VLDLR-201ENST00000382096 KCPQ6ZWJ8 1503 aa30.79■■■□□ 2.52
VLDLR-201ENST00000382096 TM4SF1P30408 202 aa30.79■■■□□ 2.52
VLDLR-201ENST00000382096 DNAJC5GQ8N7S2 189 aa30.78■■■□□ 2.52
VLDLR-201ENST00000382096 RBM46Q8TBY0 533 aaKnown RBP30.78■■■□□ 2.52
VLDLR-201ENST00000382096 SOS1Q07889 1333 aaPredicted RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms