RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3F-202ENST00000381565 PHKG2P15735 406 aa15.62■□□□□ 0.09
APOBEC3F-202ENST00000381565 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3F-202ENST00000381565 SULT6B1Q6IMI4 303 aa15.62■□□□□ 0.09
APOBEC3F-202ENST00000381565 SYTL4Q96C24 671 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3F-202ENST00000381565 ZNF831Q5JPB2 1677 aa15.61■□□□□ 0.09
APOBEC3F-202ENST00000381565 DLG5Q8TDM6 1919 aa15.61■□□□□ 0.09
APOBEC3F-202ENST00000381565 COL5A3P25940 1745 aaPredicted RBP15.61■□□□□ 0.09
APOBEC3F-202ENST00000381565 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
APOBEC3F-202ENST00000381565 DIAPH1O60610 1272 aaKnown RBP15.6■□□□□ 0.09
APOBEC3F-202ENST00000381565 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
APOBEC3F-202ENST00000381565 KCNQ4P56696 695 aa15.6■□□□□ 0.09
APOBEC3F-202ENST00000381565 UBR3Q6ZT12 1888 aa15.6■□□□□ 0.09
APOBEC3F-202ENST00000381565 CICQ96RK0 1608 aaPredicted RBP15.59■□□□□ 0.09
APOBEC3F-202ENST00000381565 C1QTNF8P60827 252 aa15.59■□□□□ 0.09
APOBEC3F-202ENST00000381565 SLC27A3Q5K4L6 730 aa15.59■□□□□ 0.09
APOBEC3F-202ENST00000381565 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
APOBEC3F-202ENST00000381565 C4BP0C0L5 1744 aa15.59■□□□□ 0.09
APOBEC3F-202ENST00000381565 MRC1P22897 1456 aa15.59■□□□□ 0.09
APOBEC3F-202ENST00000381565 HMOX1P09601 288 aa15.58■□□□□ 0.08
APOBEC3F-202ENST00000381565 TJP1Q07157 1748 aa15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 CEP350Q5VT06 3117 aa15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 UBR2Q8IWV8 1755 aa15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 DSG3P32926 999 aa15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 PLEKHO1Q53GL0 409 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 NLGN2Q8NFZ4 835 aa15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
APOBEC3F-202ENST00000381565 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
APOBEC3F-202ENST00000381565 GPR162Q16538 588 aa15.56■□□□□ 0.08
APOBEC3F-202ENST00000381565 AMOTQ4VCS5 1084 aa15.56■□□□□ 0.08
APOBEC3F-202ENST00000381565 MPRIPQ6WCQ1 1025 aa15.56■□□□□ 0.08
APOBEC3F-202ENST00000381565 PALLDQ8WX93 1383 aa15.56■□□□□ 0.08
APOBEC3F-202ENST00000381565 PIGBQ92521 554 aa15.55■□□□□ 0.08
APOBEC3F-202ENST00000381565 TFCP2L1Q9NZI6 479 aa15.54■□□□□ 0.08
APOBEC3F-202ENST00000381565 MYH14Q7Z406 1995 aaKnown RBP15.53■□□□□ 0.08
APOBEC3F-202ENST00000381565 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
APOBEC3F-202ENST00000381565 POLD1P28340 1107 aa15.53■□□□□ 0.08
APOBEC3F-202ENST00000381565 KLHL34Q8N239 644 aa15.53■□□□□ 0.08
APOBEC3F-202ENST00000381565 DCAF5Q96JK2 942 aa15.53■□□□□ 0.08
APOBEC3F-202ENST00000381565 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
APOBEC3F-202ENST00000381565 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
APOBEC3F-202ENST00000381565 POLA2Q14181 598 aa15.52■□□□□ 0.08
APOBEC3F-202ENST00000381565 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.08
APOBEC3F-202ENST00000381565 MTHFSDQ2M296 383 aaKnown RBP15.51■□□□□ 0.07
APOBEC3F-202ENST00000381565 RSPH6AQ9H0K4 717 aa15.51■□□□□ 0.07
APOBEC3F-202ENST00000381565 CCNL1Q9UK58 526 aaPredicted RBP15.51■□□□□ 0.07
APOBEC3F-202ENST00000381565 C4AP0C0L4 1744 aa15.51■□□□□ 0.07
APOBEC3F-202ENST00000381565 ERVV-2B6SEH9 535 aa15.5■□□□□ 0.07
APOBEC3F-202ENST00000381565 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
APOBEC3F-202ENST00000381565 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
APOBEC3F-202ENST00000381565 COL23A1Q86Y22 540 aaPredicted RBP15.5■□□□□ 0.07
APOBEC3F-202ENST00000381565 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
APOBEC3F-202ENST00000381565 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
APOBEC3F-202ENST00000381565 GIGYF1O75420 1035 aaPredicted RBP15.49■□□□□ 0.07
APOBEC3F-202ENST00000381565 AKAP4Q5JQC9 854 aa15.49■□□□□ 0.07
APOBEC3F-202ENST00000381565 ATG3Q9NT62 314 aa15.49■□□□□ 0.07
APOBEC3F-202ENST00000381565 KCPQ6ZWJ8 1503 aa15.48■□□□□ 0.07
APOBEC3F-202ENST00000381565 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
APOBEC3F-202ENST00000381565 ABCB7O75027 752 aa15.47■□□□□ 0.07
APOBEC3F-202ENST00000381565 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
APOBEC3F-202ENST00000381565 RALBP1Q15311 655 aa15.47■□□□□ 0.07
APOBEC3F-202ENST00000381565 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
APOBEC3F-202ENST00000381565 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
APOBEC3F-202ENST00000381565 LOC102724428A0A0B4J2F2 783 aa15.46■□□□□ 0.07
APOBEC3F-202ENST00000381565 SIK1P57059 783 aa15.46■□□□□ 0.07
APOBEC3F-202ENST00000381565 SLC4A9Q96Q91 983 aa15.46■□□□□ 0.07
APOBEC3F-202ENST00000381565 LGR6Q9HBX8 967 aa15.46■□□□□ 0.07
APOBEC3F-202ENST00000381565 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 RNMTO43148 476 aaKnown RBP15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 ITPK1Q13572 414 aa15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
APOBEC3F-202ENST00000381565 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
APOBEC3F-202ENST00000381565 CABP4P57796 275 aa15.44■□□□□ 0.06
APOBEC3F-202ENST00000381565 NFATC2IPQ8NCF5 419 aa15.44■□□□□ 0.06
APOBEC3F-202ENST00000381565 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
APOBEC3F-202ENST00000381565 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
APOBEC3F-202ENST00000381565 SLC52A2Q9HAB3 445 aa15.43■□□□□ 0.06
APOBEC3F-202ENST00000381565 ADCY9O60503 1353 aa15.43■□□□□ 0.06
APOBEC3F-202ENST00000381565 CEMIPQ8WUJ3 1361 aa15.43■□□□□ 0.06
APOBEC3F-202ENST00000381565 GRIN3BO60391 1043 aa15.42■□□□□ 0.06
APOBEC3F-202ENST00000381565 FCHSD2O94868 740 aa15.42■□□□□ 0.06
APOBEC3F-202ENST00000381565 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
APOBEC3F-202ENST00000381565 ZNF316A6NFI3 1004 aaPredicted RBP15.41■□□□□ 0.06
APOBEC3F-202ENST00000381565 ATP6V1AP38606 617 aa15.41■□□□□ 0.06
APOBEC3F-202ENST00000381565 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
APOBEC3F-202ENST00000381565 CD2APQ9Y5K6 639 aa15.41■□□□□ 0.06
APOBEC3F-202ENST00000381565 LAMB4A4D0S4 1761 aa15.41■□□□□ 0.06
APOBEC3F-202ENST00000381565 GNAT3A8MTJ3 354 aa15.4■□□□□ 0.06
APOBEC3F-202ENST00000381565 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
APOBEC3F-202ENST00000381565 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
APOBEC3F-202ENST00000381565 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
APOBEC3F-202ENST00000381565 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
APOBEC3F-202ENST00000381565 PTCD1O75127 700 aaKnown RBP15.37■□□□□ 0.05
APOBEC3F-202ENST00000381565 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms