RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 HDGFL1Q5TGJ6 251 aa21.73■■□□□ 1.07
RPAIN-203ENST00000381209 NUCB1Q02818 461 aa21.72■■□□□ 1.07
RPAIN-203ENST00000381209 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
RPAIN-203ENST00000381209 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
RPAIN-203ENST00000381209 PRDM11Q9NQV5 511 aa21.71■■□□□ 1.07
RPAIN-203ENST00000381209 PHKG2P15735 406 aa21.7■■□□□ 1.07
RPAIN-203ENST00000381209 SIRT2Q8IXJ6 389 aa21.7■■□□□ 1.07
RPAIN-203ENST00000381209 ADAMTS7Q9UKP4 1686 aa21.7■■□□□ 1.06
RPAIN-203ENST00000381209 MEGF6O75095 1541 aa21.7■■□□□ 1.06
RPAIN-203ENST00000381209 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
RPAIN-203ENST00000381209 IFNL2Q8IZJ0 200 aa21.7■■□□□ 1.06
RPAIN-203ENST00000381209 WDR17Q8IZU2 1322 aa21.69■■□□□ 1.06
RPAIN-203ENST00000381209 MSH5O43196 834 aa21.69■■□□□ 1.06
RPAIN-203ENST00000381209 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
RPAIN-203ENST00000381209 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
RPAIN-203ENST00000381209 HEG1Q9ULI3 1381 aa21.68■■□□□ 1.06
RPAIN-203ENST00000381209 KDM3BQ7LBC6 1761 aa21.68■■□□□ 1.06
RPAIN-203ENST00000381209 KCNQ3O43525 872 aa21.68■■□□□ 1.06
RPAIN-203ENST00000381209 FKBP5Q13451 457 aaPredicted RBP21.68■■□□□ 1.06
RPAIN-203ENST00000381209 ANKRD44Q8N8A2 993 aa21.68■■□□□ 1.06
RPAIN-203ENST00000381209 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
RPAIN-203ENST00000381209 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
RPAIN-203ENST00000381209 NHSL1Q5SYE7 1610 aa21.67■■□□□ 1.06
RPAIN-203ENST00000381209 F6X3S4 739 aa21.66■■□□□ 1.06
RPAIN-203ENST00000381209 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
RPAIN-203ENST00000381209 PXDNLA1KZ92 1463 aa21.66■■□□□ 1.06
RPAIN-203ENST00000381209 SLC4A10Q6U841 1118 aa21.65■■□□□ 1.06
RPAIN-203ENST00000381209 MEIS3Q99687 375 aa21.65■■□□□ 1.06
RPAIN-203ENST00000381209 SLC52A2Q9HAB3 445 aa21.65■■□□□ 1.06
RPAIN-203ENST00000381209 KDM6AO15550 1401 aaPredicted RBP21.65■■□□□ 1.06
RPAIN-203ENST00000381209 ATP10DQ9P241 1426 aa21.65■■□□□ 1.06
RPAIN-203ENST00000381209 CEP85Q6P2H3 762 aa21.65■■□□□ 1.06
RPAIN-203ENST00000381209 DCAF5Q96JK2 942 aa21.65■■□□□ 1.06
RPAIN-203ENST00000381209 COL5A2P05997 1499 aaPredicted RBP21.64■■□□□ 1.05
RPAIN-203ENST00000381209 GIGYF1O75420 1035 aaPredicted RBP21.64■■□□□ 1.05
RPAIN-203ENST00000381209 EIF2S2P20042 333 aaKnown RBP21.64■■□□□ 1.05
RPAIN-203ENST00000381209 NPM2Q86SE8 214 aaKnown RBP21.64■■□□□ 1.05
RPAIN-203ENST00000381209 DCTPP1Q9H773 170 aa21.64■■□□□ 1.05
RPAIN-203ENST00000381209 CARD10Q9BWT7 1032 aa21.63■■□□□ 1.05
RPAIN-203ENST00000381209 CYP27B1O15528 508 aa21.62■■□□□ 1.05
RPAIN-203ENST00000381209 GNAI3P08754 354 aa21.62■■□□□ 1.05
RPAIN-203ENST00000381209 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
RPAIN-203ENST00000381209 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
RPAIN-203ENST00000381209 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
RPAIN-203ENST00000381209 LNPKQ9C0E8 428 aa21.61■■□□□ 1.05
RPAIN-203ENST00000381209 CHPF2Q9P2E5 772 aa21.61■■□□□ 1.05
RPAIN-203ENST00000381209 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
RPAIN-203ENST00000381209 MRC1P22897 1456 aa21.6■■□□□ 1.05
RPAIN-203ENST00000381209 HMMRO75330 724 aa21.6■■□□□ 1.05
RPAIN-203ENST00000381209 GNAI2P04899 355 aa21.6■■□□□ 1.05
RPAIN-203ENST00000381209 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
RPAIN-203ENST00000381209 DDRGK1Q96HY6 314 aa21.59■■□□□ 1.05
RPAIN-203ENST00000381209 PKD1L3Q7Z443 1732 aa21.59■■□□□ 1.05
RPAIN-203ENST00000381209 ABCA3Q99758 1704 aa21.57■■□□□ 1.04
RPAIN-203ENST00000381209 SIPA1L3O60292 1781 aaPredicted RBP21.57■■□□□ 1.04
RPAIN-203ENST00000381209 NFATC2IPQ8NCF5 419 aa21.57■■□□□ 1.04
RPAIN-203ENST00000381209 ZCRB1Q8TBF4 217 aaKnown RBP21.57■■□□□ 1.04
RPAIN-203ENST00000381209 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
RPAIN-203ENST00000381209 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
RPAIN-203ENST00000381209 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
RPAIN-203ENST00000381209 IL2RBP14784 551 aa21.55■■□□□ 1.04
RPAIN-203ENST00000381209 EVA1CP58658 441 aa21.55■■□□□ 1.04
RPAIN-203ENST00000381209 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
RPAIN-203ENST00000381209 SRCIN1Q9C0H9 1055 aa21.55■■□□□ 1.04
RPAIN-203ENST00000381209 HYPKQ9NX55 129 aa21.55■■□□□ 1.04
RPAIN-203ENST00000381209 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
RPAIN-203ENST00000381209 CACNA1FO60840 1977 aa21.55■■□□□ 1.04
RPAIN-203ENST00000381209 AHDC1Q5TGY3 1603 aaPredicted RBP21.54■■□□□ 1.04
RPAIN-203ENST00000381209 LTBP4Q8N2S1 1624 aa21.54■■□□□ 1.04
RPAIN-203ENST00000381209 CABP4P57796 275 aa21.54■■□□□ 1.04
RPAIN-203ENST00000381209 NKX1-1Q15270 411 aaPredicted RBP21.54■■□□□ 1.04
RPAIN-203ENST00000381209 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
RPAIN-203ENST00000381209 DDX21Q9NR30 783 aaKnown RBP eCLIP21.54■■□□□ 1.04
RPAIN-203ENST00000381209 SCN11AQ9UI33 1791 aa21.53■■□□□ 1.04
RPAIN-203ENST00000381209 SLC39A6Q13433 755 aa21.53■■□□□ 1.04
RPAIN-203ENST00000381209 BMP2KLQ5H9B9 411 aa21.53■■□□□ 1.04
RPAIN-203ENST00000381209 BEND3Q5T5X7 828 aa21.53■■□□□ 1.04
RPAIN-203ENST00000381209 LARP1Q6PKG0 1096 aaKnown RBP21.53■■□□□ 1.04
RPAIN-203ENST00000381209 USP44Q9H0E7 712 aa21.53■■□□□ 1.04
RPAIN-203ENST00000381209 PI4KAP2A4QPH2 592 aa21.52■■□□□ 1.04
RPAIN-203ENST00000381209 ATP8B2P98198 1209 aa21.52■■□□□ 1.04
RPAIN-203ENST00000381209 TTC5Q8N0Z6 440 aa21.52■■□□□ 1.04
RPAIN-203ENST00000381209 PI4KAP1Q8N8J0 262 aa21.52■■□□□ 1.04
RPAIN-203ENST00000381209 UPF2Q9HAU5 1272 aaKnown RBP21.52■■□□□ 1.04
RPAIN-203ENST00000381209 STRN4Q9NRL3 753 aa21.52■■□□□ 1.04
RPAIN-203ENST00000381209 ERVV-2B6SEH9 535 aa21.51■■□□□ 1.03
RPAIN-203ENST00000381209 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
RPAIN-203ENST00000381209 PARP4Q9UKK3 1724 aaKnown RBP21.51■■□□□ 1.03
RPAIN-203ENST00000381209 ADCY9O60503 1353 aa21.51■■□□□ 1.03
RPAIN-203ENST00000381209 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
RPAIN-203ENST00000381209 SEC24BO95487 1268 aa21.5■■□□□ 1.03
RPAIN-203ENST00000381209 SNRPA1P09661 255 aaKnown RBP21.5■■□□□ 1.03
RPAIN-203ENST00000381209 KSR2Q6VAB6 950 aa21.5■■□□□ 1.03
RPAIN-203ENST00000381209 FMNL2Q96PY5 1086 aa21.5■■□□□ 1.03
RPAIN-203ENST00000381209 ANXA1P04083 346 aa21.5■■□□□ 1.03
RPAIN-203ENST00000381209 ZNF496Q96IT1 587 aaPredicted RBP21.5■■□□□ 1.03
RPAIN-203ENST00000381209 N4BP2Q86UW6 1770 aaPredicted RBP21.49■■□□□ 1.03
RPAIN-203ENST00000381209 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
RPAIN-203ENST00000381209 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
RPAIN-203ENST00000381209 PDIA6Q15084 440 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms