RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 PARP4Q9UKK3 1724 aaKnown RBP13.94□□□□□ -0.18
FAM239A-201ENST00000381108 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
FAM239A-201ENST00000381108 PHKG2P15735 406 aa13.93□□□□□ -0.18
FAM239A-201ENST00000381108 KCNQ3O43525 872 aa13.93□□□□□ -0.18
FAM239A-201ENST00000381108 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
FAM239A-201ENST00000381108 OVOS2A0A0G2JMS6 1433 aa13.93□□□□□ -0.18
FAM239A-201ENST00000381108 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
FAM239A-201ENST00000381108 CYP27B1O15528 508 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
FAM239A-201ENST00000381108 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 SKAP1Q86WV1 359 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 CARD10Q9BWT7 1032 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 BABAM1Q9NWV8 329 aa13.92□□□□□ -0.18
FAM239A-201ENST00000381108 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
FAM239A-201ENST00000381108 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
FAM239A-201ENST00000381108 NUTM2BA6NNL0 878 aaPredicted RBP13.91□□□□□ -0.18
FAM239A-201ENST00000381108 NUTM2EB1AL46 878 aaPredicted RBP13.91□□□□□ -0.18
FAM239A-201ENST00000381108 NUTM2AQ8IVF1 878 aaPredicted RBP13.91□□□□□ -0.18
FAM239A-201ENST00000381108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
FAM239A-201ENST00000381108 DDX19BQ9UMR2 479 aa13.91□□□□□ -0.18
FAM239A-201ENST00000381108 KDM2BQ8NHM5 1336 aa13.91□□□□□ -0.18
FAM239A-201ENST00000381108 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
FAM239A-201ENST00000381108 ARHGAP45Q92619 1136 aa13.9□□□□□ -0.18
FAM239A-201ENST00000381108 IL2RBP14784 551 aa13.9□□□□□ -0.18
FAM239A-201ENST00000381108 EIF4A1P60842 406 aaKnown RBP13.9□□□□□ -0.18
FAM239A-201ENST00000381108 CENPQQ7L2Z9 268 aaPredicted RBP13.9□□□□□ -0.18
FAM239A-201ENST00000381108 STK31Q9BXU1 1019 aa13.9□□□□□ -0.18
FAM239A-201ENST00000381108 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
FAM239A-201ENST00000381108 ABCC4O15439 1325 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 IGHDP01880 384 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
FAM239A-201ENST00000381108 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
FAM239A-201ENST00000381108 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 G2E3Q7L622 706 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
FAM239A-201ENST00000381108 PLCH1Q4KWH8 1693 aa13.89□□□□□ -0.19
FAM239A-201ENST00000381108 DDX54Q8TDD1 881 aaKnown RBP13.88□□□□□ -0.19
FAM239A-201ENST00000381108 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
FAM239A-201ENST00000381108 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
FAM239A-201ENST00000381108 PCDH11XQ9BZA7 1347 aa13.88□□□□□ -0.19
FAM239A-201ENST00000381108 PCDH11YQ9BZA8 1340 aa13.88□□□□□ -0.19
FAM239A-201ENST00000381108 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
FAM239A-201ENST00000381108 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
FAM239A-201ENST00000381108 RGS12O14924 1447 aa13.87□□□□□ -0.19
FAM239A-201ENST00000381108 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
FAM239A-201ENST00000381108 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
FAM239A-201ENST00000381108 AAMPQ13685 434 aa13.86□□□□□ -0.19
FAM239A-201ENST00000381108 PTPRCP08575 1304 aa13.86□□□□□ -0.19
FAM239A-201ENST00000381108 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
FAM239A-201ENST00000381108 PRAMEF22A3QJZ6 481 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 F6X3S4 739 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 C1orf115Q9H7X2 142 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 SOS1Q07889 1333 aaPredicted RBP13.85□□□□□ -0.19
FAM239A-201ENST00000381108 FLIIQ13045 1269 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
FAM239A-201ENST00000381108 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
FAM239A-201ENST00000381108 MRC1P22897 1456 aa13.84□□□□□ -0.19
FAM239A-201ENST00000381108 CABP4P57796 275 aa13.84□□□□□ -0.19
FAM239A-201ENST00000381108 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
FAM239A-201ENST00000381108 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.19
FAM239A-201ENST00000381108 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.19
FAM239A-201ENST00000381108 CACNA1FO60840 1977 aa13.83□□□□□ -0.2
FAM239A-201ENST00000381108 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
FAM239A-201ENST00000381108 ANXA1P04083 346 aa13.83□□□□□ -0.2
FAM239A-201ENST00000381108 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
FAM239A-201ENST00000381108 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
FAM239A-201ENST00000381108 NRAPQ86VF7 1730 aa13.83□□□□□ -0.2
FAM239A-201ENST00000381108 C5P01031 1676 aa13.82□□□□□ -0.2
FAM239A-201ENST00000381108 HOXB7P09629 217 aa13.82□□□□□ -0.2
FAM239A-201ENST00000381108 TTC5Q8N0Z6 440 aa13.82□□□□□ -0.2
FAM239A-201ENST00000381108 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
FAM239A-201ENST00000381108 RGS3P49796 1198 aa13.81□□□□□ -0.2
FAM239A-201ENST00000381108 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
FAM239A-201ENST00000381108 HEG1Q9ULI3 1381 aa13.81□□□□□ -0.2
FAM239A-201ENST00000381108 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
FAM239A-201ENST00000381108 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
FAM239A-201ENST00000381108 TOGARAM1Q9Y4F4 1720 aa13.8□□□□□ -0.2
FAM239A-201ENST00000381108 WNK3Q9BYP7 1800 aa13.8□□□□□ -0.2
FAM239A-201ENST00000381108 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
FAM239A-201ENST00000381108 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
FAM239A-201ENST00000381108 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
FAM239A-201ENST00000381108 JCADQ9P266 1359 aa13.79□□□□□ -0.2
FAM239A-201ENST00000381108 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
FAM239A-201ENST00000381108 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
FAM239A-201ENST00000381108 MEIS3Q99687 375 aa13.78□□□□□ -0.2
FAM239A-201ENST00000381108 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
FAM239A-201ENST00000381108 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
FAM239A-201ENST00000381108 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
FAM239A-201ENST00000381108 SPATA31A1Q5TZJ5 1347 aa13.78□□□□□ -0.2
FAM239A-201ENST00000381108 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
FAM239A-201ENST00000381108 CCT4P50991 539 aaKnown RBP13.77□□□□□ -0.21
FAM239A-201ENST00000381108 HDAC1Q13547 482 aaPredicted RBP13.77□□□□□ -0.21
FAM239A-201ENST00000381108 ERICH6Q7L0X2 663 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms