RNA–Protein interactions for RNA: ENST00000380992.5

TSSC4-202, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSSC4, Length 992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-202ENST00000380992 DIAPH1O60610 1272 aaKnown RBP22.23■■□□□ 1.15
TSSC4-202ENST00000380992 MSH5O43196 834 aa22.22■■□□□ 1.15
TSSC4-202ENST00000380992 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
TSSC4-202ENST00000380992 AK7Q96M32 723 aa22.22■■□□□ 1.15
TSSC4-202ENST00000380992 SSFA2P28290 1259 aa22.21■■□□□ 1.15
TSSC4-202ENST00000380992 CABP4P57796 275 aa22.21■■□□□ 1.15
TSSC4-202ENST00000380992 LINC00116Q8NCU8 138 aa22.21■■□□□ 1.15
TSSC4-202ENST00000380992 ITPK1Q13572 414 aa22.2■■□□□ 1.14
TSSC4-202ENST00000380992 AKAP4Q5JQC9 854 aa22.2■■□□□ 1.14
TSSC4-202ENST00000380992 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
TSSC4-202ENST00000380992 COL5A3P25940 1745 aaPredicted RBP22.17■■□□□ 1.14
TSSC4-202ENST00000380992 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
TSSC4-202ENST00000380992 YY1P25490 414 aa22.17■■□□□ 1.14
TSSC4-202ENST00000380992 RC3H1Q5TC82 1133 aaKnown RBP22.17■■□□□ 1.14
TSSC4-202ENST00000380992 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
TSSC4-202ENST00000380992 NFATC2IPQ8NCF5 419 aa22.17■■□□□ 1.14
TSSC4-202ENST00000380992 SLC4A9Q96Q91 983 aa22.17■■□□□ 1.14
TSSC4-202ENST00000380992 CHD4Q14839 1912 aa22.16■■□□□ 1.14
TSSC4-202ENST00000380992 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.16■■□□□ 1.14
TSSC4-202ENST00000380992 HMOX1P09601 288 aa22.16■■□□□ 1.14
TSSC4-202ENST00000380992 ADAMTS7Q9UKP4 1686 aa22.15■■□□□ 1.14
TSSC4-202ENST00000380992 CNGB1Q14028 1251 aaPredicted RBP22.15■■□□□ 1.14
TSSC4-202ENST00000380992 CICQ96RK0 1608 aaPredicted RBP22.14■■□□□ 1.14
TSSC4-202ENST00000380992 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.13
TSSC4-202ENST00000380992 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
TSSC4-202ENST00000380992 GNPATO15228 680 aa22.12■■□□□ 1.13
TSSC4-202ENST00000380992 MTHFSDQ2M296 383 aaKnown RBP22.12■■□□□ 1.13
TSSC4-202ENST00000380992 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
TSSC4-202ENST00000380992 SLC52A2Q9HAB3 445 aa22.12■■□□□ 1.13
TSSC4-202ENST00000380992 CD2APQ9Y5K6 639 aa22.12■■□□□ 1.13
TSSC4-202ENST00000380992 MRC1P22897 1456 aa22.11■■□□□ 1.13
TSSC4-202ENST00000380992 MYH14Q7Z406 1995 aaKnown RBP22.11■■□□□ 1.13
TSSC4-202ENST00000380992 PHF14O94880 888 aa22.11■■□□□ 1.13
TSSC4-202ENST00000380992 ADRA2BP18089 450 aa22.11■■□□□ 1.13
TSSC4-202ENST00000380992 LGR6Q9HBX8 967 aa22.11■■□□□ 1.13
TSSC4-202ENST00000380992 RTCBQ9Y3I0 505 aaKnown RBP22.11■■□□□ 1.13
TSSC4-202ENST00000380992 RNMTO43148 476 aaKnown RBP22.1■■□□□ 1.13
TSSC4-202ENST00000380992 TRAPPC3LQ5T215 181 aa22.1■■□□□ 1.13
TSSC4-202ENST00000380992 RPS6KA4O75676 772 aa22.09■■□□□ 1.13
TSSC4-202ENST00000380992 SMIM5Q71RC9 77 aa22.09■■□□□ 1.13
TSSC4-202ENST00000380992 KLHL34Q8N239 644 aa22.09■■□□□ 1.13
TSSC4-202ENST00000380992 CFAP53Q96M91 514 aa22.09■■□□□ 1.13
TSSC4-202ENST00000380992 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.13
TSSC4-202ENST00000380992 NLGN2Q8NFZ4 835 aa22.08■■□□□ 1.13
TSSC4-202ENST00000380992 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
TSSC4-202ENST00000380992 PTCD1O75127 700 aaKnown RBP22.07■■□□□ 1.12
TSSC4-202ENST00000380992 GPR162Q16538 588 aa22.07■■□□□ 1.12
TSSC4-202ENST00000380992 TJP1Q07157 1748 aa22.06■■□□□ 1.12
TSSC4-202ENST00000380992 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
TSSC4-202ENST00000380992 NLGN1Q8N2Q7 840 aa22.05■■□□□ 1.12
TSSC4-202ENST00000380992 GAS2L2Q8NHY3 880 aa22.05■■□□□ 1.12
TSSC4-202ENST00000380992 ARHGEF1Q92888 912 aaKnown RBP22.05■■□□□ 1.12
TSSC4-202ENST00000380992 UTRNP46939 3433 aa22.05■■□□□ 1.12
TSSC4-202ENST00000380992 NUDCQ9Y266 331 aa22.04■■□□□ 1.12
TSSC4-202ENST00000380992 CRKLP46109 303 aaKnown RBP22.03■■□□□ 1.12
TSSC4-202ENST00000380992 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
TSSC4-202ENST00000380992 VSIG10Q8N0Z9 540 aa22.02■■□□□ 1.12
TSSC4-202ENST00000380992 C4AP0C0L4 1744 aa22.02■■□□□ 1.12
TSSC4-202ENST00000380992 UBR2Q8IWV8 1755 aa22.02■■□□□ 1.11
TSSC4-202ENST00000380992 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
TSSC4-202ENST00000380992 GRIN3BO60391 1043 aa22.01■■□□□ 1.11
TSSC4-202ENST00000380992 RFC4P35249 363 aa22.01■■□□□ 1.11
TSSC4-202ENST00000380992 RSPH6AQ9H0K4 717 aa22.01■■□□□ 1.11
TSSC4-202ENST00000380992 SIPA1L3O60292 1781 aaPredicted RBP22■■□□□ 1.11
TSSC4-202ENST00000380992 IL17REQ8NFR9 667 aa22■■□□□ 1.11
TSSC4-202ENST00000380992 KCPQ6ZWJ8 1503 aa22■■□□□ 1.11
TSSC4-202ENST00000380992 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
TSSC4-202ENST00000380992 FCHSD2O94868 740 aa21.99■■□□□ 1.11
TSSC4-202ENST00000380992 GYS1P13807 737 aa21.99■■□□□ 1.11
TSSC4-202ENST00000380992 SLC39A6Q13433 755 aa21.99■■□□□ 1.11
TSSC4-202ENST00000380992 INTS5Q6P9B9 1019 aaKnown RBP21.99■■□□□ 1.11
TSSC4-202ENST00000380992 MMP10P09238 476 aa21.98■■□□□ 1.11
TSSC4-202ENST00000380992 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
TSSC4-202ENST00000380992 CYP19A1P11511 503 aaPredicted RBP21.97■■□□□ 1.11
TSSC4-202ENST00000380992 YBX3P16989 372 aaKnown RBP eCLIP21.97■■□□□ 1.11
TSSC4-202ENST00000380992 PRKAR2BP31323 418 aa21.97■■□□□ 1.11
TSSC4-202ENST00000380992 DNAJC10Q8IXB1 793 aa21.97■■□□□ 1.11
TSSC4-202ENST00000380992 CEMIPQ8WUJ3 1361 aa21.97■■□□□ 1.11
TSSC4-202ENST00000380992 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
TSSC4-202ENST00000380992 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
TSSC4-202ENST00000380992 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
TSSC4-202ENST00000380992 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
TSSC4-202ENST00000380992 TEFQ10587 303 aa21.95■■□□□ 1.1
TSSC4-202ENST00000380992 ZNF784Q8NCA9 323 aaPredicted RBP21.95■■□□□ 1.1
TSSC4-202ENST00000380992 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
TSSC4-202ENST00000380992 TGFB2P61812 414 aa21.93■■□□□ 1.1
TSSC4-202ENST00000380992 ZNF790Q6PG37 636 aa21.93■■□□□ 1.1
TSSC4-202ENST00000380992 TTC5Q8N0Z6 440 aa21.93■■□□□ 1.1
TSSC4-202ENST00000380992 TEX13AQ9BXU3 409 aaPredicted RBP21.93■■□□□ 1.1
TSSC4-202ENST00000380992 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
TSSC4-202ENST00000380992 RALBP1Q15311 655 aa21.92■■□□□ 1.1
TSSC4-202ENST00000380992 PARP3Q9Y6F1 533 aa21.92■■□□□ 1.1
TSSC4-202ENST00000380992 KIAA1551Q9HCM1 1747 aa21.92■■□□□ 1.1
TSSC4-202ENST00000380992 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
TSSC4-202ENST00000380992 HTATSF1O43719 755 aaKnown RBP21.91■■□□□ 1.1
TSSC4-202ENST00000380992 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
TSSC4-202ENST00000380992 HEG1Q9ULI3 1381 aa21.89■■□□□ 1.1
TSSC4-202ENST00000380992 STARD3NLO95772 234 aa21.89■■□□□ 1.09
TSSC4-202ENST00000380992 TM4SF1P30408 202 aa21.89■■□□□ 1.09
TSSC4-202ENST00000380992 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms