RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 TNNQ9UQP3 1299 aa14.71□□□□□ -0.06
GABPB1-203ENST00000380877 MARCH6O60337 910 aa14.7□□□□□ -0.06
GABPB1-203ENST00000380877 MEIS3Q99687 375 aa14.7□□□□□ -0.06
GABPB1-203ENST00000380877 CYP46A1Q9Y6A2 500 aa14.7□□□□□ -0.06
GABPB1-203ENST00000380877 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
GABPB1-203ENST00000380877 KRT24Q2M2I5 525 aa14.7□□□□□ -0.06
GABPB1-203ENST00000380877 GNL3LQ9NVN8 582 aaKnown RBP14.7□□□□□ -0.06
GABPB1-203ENST00000380877 ZBTB3Q9H5J0 574 aa14.7□□□□□ -0.06
GABPB1-203ENST00000380877 ARAP3Q8WWN8 1544 aa14.7□□□□□ -0.06
GABPB1-203ENST00000380877 RLBP1P12271 317 aa14.69□□□□□ -0.06
GABPB1-203ENST00000380877 HDAC1Q13547 482 aaPredicted RBP14.69□□□□□ -0.06
GABPB1-203ENST00000380877 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
GABPB1-203ENST00000380877 ZCRB1Q8TBF4 217 aaKnown RBP14.69□□□□□ -0.06
GABPB1-203ENST00000380877 CHPF2Q9P2E5 772 aa14.69□□□□□ -0.06
GABPB1-203ENST00000380877 MYOM2P54296 1465 aa14.69□□□□□ -0.06
GABPB1-203ENST00000380877 PRDM15P57071 1507 aaPredicted RBP14.69□□□□□ -0.06
GABPB1-203ENST00000380877 RAD21O60216 631 aa14.69□□□□□ -0.06
GABPB1-203ENST00000380877 SLC39A6Q13433 755 aa14.69□□□□□ -0.06
GABPB1-203ENST00000380877 BICDL1Q6ZP65 573 aa14.68□□□□□ -0.06
GABPB1-203ENST00000380877 PDCP20941 246 aa14.68□□□□□ -0.06
GABPB1-203ENST00000380877 PPP1R42Q7Z4L9 355 aa14.68□□□□□ -0.06
GABPB1-203ENST00000380877 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 DHX16O60231 1041 aaKnown RBP14.67□□□□□ -0.06
GABPB1-203ENST00000380877 BECN2A8MW95 431 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 KDM5CP41229 1560 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 ATP5J2-PTCD1G3V325 749 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 SAFBQ15424 915 aaKnown RBP eCLIP14.67□□□□□ -0.06
GABPB1-203ENST00000380877 METP08581 1390 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 MAP3K5Q99683 1374 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 SART3Q15020 963 aaKnown RBP14.67□□□□□ -0.06
GABPB1-203ENST00000380877 METTL24Q5JXM2 366 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 TEX13AQ9BXU3 409 aaPredicted RBP14.67□□□□□ -0.06
GABPB1-203ENST00000380877 BOLA2Q9H3K6 86 aa14.67□□□□□ -0.06
GABPB1-203ENST00000380877 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 ERVK-7P63135 1459 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 EFCAB6Q5THR3 1501 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 GOLGA6L19H0YKK7 550 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 HSP90AB3PQ58FF7 597 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 ANKRD13DQ6ZTN6 518 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 CCDC8Q9H0W5 538 aaPredicted RBP14.66□□□□□ -0.06
GABPB1-203ENST00000380877 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 BLOC1S2Q6QNY1 142 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 VPS53Q5VIR6 699 aa14.66□□□□□ -0.06
GABPB1-203ENST00000380877 TSPOAP1O95153 1857 aa14.65□□□□□ -0.06
GABPB1-203ENST00000380877 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
GABPB1-203ENST00000380877 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
GABPB1-203ENST00000380877 INSRP06213 1382 aa14.65□□□□□ -0.06
GABPB1-203ENST00000380877 ZSCAN25Q6NSZ9 544 aa14.65□□□□□ -0.06
GABPB1-203ENST00000380877 CWC22Q9HCG8 908 aaKnown RBP14.65□□□□□ -0.06
GABPB1-203ENST00000380877 TRAK2O60296 914 aa14.65□□□□□ -0.06
GABPB1-203ENST00000380877 RRP12Q5JTH9 1297 aaKnown RBP14.65□□□□□ -0.06
GABPB1-203ENST00000380877 TRMT112Q9UI30 125 aaKnown RBP14.65□□□□□ -0.06
GABPB1-203ENST00000380877 IFIT5Q13325 482 aaKnown RBP14.64□□□□□ -0.07
GABPB1-203ENST00000380877 ANKRD44Q8N8A2 993 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 JAKMIP1Q96N16 626 aaKnown RBP14.64□□□□□ -0.07
GABPB1-203ENST00000380877 GPTP24298 496 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 ANKRD1Q15327 319 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 CREBRFQ8IUR6 639 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 XAGE3Q8WTP9 111 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 CLSTN1O94985 981 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 NUCB1Q02818 461 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 COPS6Q7L5N1 327 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 ABCC3O15438 1527 aa14.64□□□□□ -0.07
GABPB1-203ENST00000380877 KDM5AP29375 1690 aaKnown RBP14.64□□□□□ -0.07
GABPB1-203ENST00000380877 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
GABPB1-203ENST00000380877 NFATC2IPQ8NCF5 419 aa14.63□□□□□ -0.07
GABPB1-203ENST00000380877 NACAP1Q9BZK3 213 aa14.63□□□□□ -0.07
GABPB1-203ENST00000380877 BLMP54132 1417 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-203ENST00000380877 TOM1O60784 492 aa14.63□□□□□ -0.07
GABPB1-203ENST00000380877 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-203ENST00000380877 IDH1O75874 414 aaKnown RBP14.63□□□□□ -0.07
GABPB1-203ENST00000380877 UPF3BQ9BZI7 483 aaKnown RBP14.62□□□□□ -0.07
GABPB1-203ENST00000380877 ECHDC1Q9NTX5 307 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 ZMYM4Q5VZL5 1548 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 KAT6BQ8WYB5 2073 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 TET3O43151 1660 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 IL2RBP14784 551 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 STK3Q13188 491 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 IQGAP3Q86VI3 1631 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 KSR2Q6VAB6 950 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 TBC1D9Q6ZT07 1266 aa14.62□□□□□ -0.07
GABPB1-203ENST00000380877 PLEKHG1Q9ULL1 1385 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 PDRG1Q9NUG6 133 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 CTNNA3Q9UI47 895 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 IFIT1P09914 478 aaKnown RBP14.61□□□□□ -0.07
GABPB1-203ENST00000380877 KRT32Q14532 448 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 JARID2Q92833 1246 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-203ENST00000380877 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
GABPB1-203ENST00000380877 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-203ENST00000380877 ZPR1O75312 459 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 ALDH1L1O75891 902 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 MBD3O95983 291 aa14.61□□□□□ -0.07
GABPB1-203ENST00000380877 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms