RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SLC4A10Q6U841 1118 aa17.84■□□□□ 0.45
CLCN4-201ENST00000380829 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
CLCN4-201ENST00000380829 PXDNQ92626 1479 aa17.84■□□□□ 0.45
CLCN4-201ENST00000380829 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
CLCN4-201ENST00000380829 ERBB3P21860 1342 aa17.84■□□□□ 0.45
CLCN4-201ENST00000380829 GLIPR1L2Q4G1C9 344 aa17.83■□□□□ 0.45
CLCN4-201ENST00000380829 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.45
CLCN4-201ENST00000380829 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.45
CLCN4-201ENST00000380829 CCDC30Q5VVM6 783 aa17.83■□□□□ 0.45
CLCN4-201ENST00000380829 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.45
CLCN4-201ENST00000380829 NCAPD2Q15021 1401 aa17.83■□□□□ 0.44
CLCN4-201ENST00000380829 GCC1Q96CN9 775 aa17.83■□□□□ 0.44
CLCN4-201ENST00000380829 MEIS3Q99687 375 aa17.83■□□□□ 0.44
CLCN4-201ENST00000380829 AMOTQ4VCS5 1084 aa17.82■□□□□ 0.44
CLCN4-201ENST00000380829 FAM208AQ9UK61 1670 aaKnown RBP17.81■□□□□ 0.44
CLCN4-201ENST00000380829 FLIIQ13045 1269 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 C1orf141Q5JVX7 400 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 KCNQ3O43525 872 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 TEFQ10587 303 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
CLCN4-201ENST00000380829 ARXQ96QS3 562 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 XIRP1Q702N8 1843 aaKnown RBP17.81■□□□□ 0.44
CLCN4-201ENST00000380829 LMO7Q8WWI1 1683 aa17.81■□□□□ 0.44
CLCN4-201ENST00000380829 ZNF335Q9H4Z2 1342 aaPredicted RBP17.8■□□□□ 0.44
CLCN4-201ENST00000380829 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
CLCN4-201ENST00000380829 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
CLCN4-201ENST00000380829 NLRP2Q9NX02 1062 aa17.8■□□□□ 0.44
CLCN4-201ENST00000380829 ATP10DQ9P241 1426 aa17.8■□□□□ 0.44
CLCN4-201ENST00000380829 CAMTA1Q9Y6Y1 1673 aa17.79■□□□□ 0.44
CLCN4-201ENST00000380829 BTBD11A6QL63 1104 aa17.79■□□□□ 0.44
CLCN4-201ENST00000380829 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
CLCN4-201ENST00000380829 EIF4A1P60842 406 aaKnown RBP17.79■□□□□ 0.44
CLCN4-201ENST00000380829 BRINP3Q76B58 766 aa17.79■□□□□ 0.44
CLCN4-201ENST00000380829 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
CLCN4-201ENST00000380829 SPATA31A3Q5VYP0 1347 aa17.78■□□□□ 0.44
CLCN4-201ENST00000380829 CEP85Q6P2H3 762 aa17.78■□□□□ 0.44
CLCN4-201ENST00000380829 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
CLCN4-201ENST00000380829 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.44
CLCN4-201ENST00000380829 CCT4P50991 539 aaKnown RBP17.77■□□□□ 0.44
CLCN4-201ENST00000380829 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.44
CLCN4-201ENST00000380829 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.43
CLCN4-201ENST00000380829 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
CLCN4-201ENST00000380829 KDM3BQ7LBC6 1761 aa17.75■□□□□ 0.43
CLCN4-201ENST00000380829 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
CLCN4-201ENST00000380829 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
CLCN4-201ENST00000380829 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
CLCN4-201ENST00000380829 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
CLCN4-201ENST00000380829 COL18A1P39060 1754 aa17.74■□□□□ 0.43
CLCN4-201ENST00000380829 SLAIN2Q9P270 581 aa17.73■□□□□ 0.43
CLCN4-201ENST00000380829 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
CLCN4-201ENST00000380829 APBB1O00213 710 aa17.72■□□□□ 0.43
CLCN4-201ENST00000380829 MEGF6O75095 1541 aa17.72■□□□□ 0.43
CLCN4-201ENST00000380829 ANXA1P04083 346 aa17.72■□□□□ 0.43
CLCN4-201ENST00000380829 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
CLCN4-201ENST00000380829 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
CLCN4-201ENST00000380829 HSP90AA2PQ14568 343 aaPredicted RBP17.71■□□□□ 0.43
CLCN4-201ENST00000380829 TBC1D32Q96NH3 1257 aa17.71■□□□□ 0.43
CLCN4-201ENST00000380829 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.43
CLCN4-201ENST00000380829 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
CLCN4-201ENST00000380829 HOXB7P09629 217 aa17.71■□□□□ 0.43
CLCN4-201ENST00000380829 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
CLCN4-201ENST00000380829 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
CLCN4-201ENST00000380829 GNAI2P04899 355 aa17.7■□□□□ 0.42
CLCN4-201ENST00000380829 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
CLCN4-201ENST00000380829 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
CLCN4-201ENST00000380829 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
CLCN4-201ENST00000380829 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
CLCN4-201ENST00000380829 CPDO75976 1380 aa17.68■□□□□ 0.42
CLCN4-201ENST00000380829 HMMRO75330 724 aa17.68■□□□□ 0.42
CLCN4-201ENST00000380829 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
CLCN4-201ENST00000380829 PHKG2P15735 406 aa17.68■□□□□ 0.42
CLCN4-201ENST00000380829 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
CLCN4-201ENST00000380829 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
CLCN4-201ENST00000380829 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
CLCN4-201ENST00000380829 GNAI3P08754 354 aa17.67■□□□□ 0.42
CLCN4-201ENST00000380829 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
CLCN4-201ENST00000380829 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
CLCN4-201ENST00000380829 PRDM11Q9NQV5 511 aa17.67■□□□□ 0.42
CLCN4-201ENST00000380829 HSP90AA1P07900 732 aaKnown RBP17.67■□□□□ 0.42
CLCN4-201ENST00000380829 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
CLCN4-201ENST00000380829 PXDNLA1KZ92 1463 aa17.67■□□□□ 0.42
CLCN4-201ENST00000380829 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
CLCN4-201ENST00000380829 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
CLCN4-201ENST00000380829 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
CLCN4-201ENST00000380829 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
CLCN4-201ENST00000380829 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
CLCN4-201ENST00000380829 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
CLCN4-201ENST00000380829 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
CLCN4-201ENST00000380829 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
CLCN4-201ENST00000380829 PANK2Q9BZ23 570 aa17.65■□□□□ 0.42
CLCN4-201ENST00000380829 ABCC6O95255 1503 aa17.65■□□□□ 0.42
CLCN4-201ENST00000380829 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.42
CLCN4-201ENST00000380829 GSPT1P15170 499 aaKnown RBP17.64■□□□□ 0.42
CLCN4-201ENST00000380829 L1TD1Q5T7N2 865 aaKnown RBP17.64■□□□□ 0.42
CLCN4-201ENST00000380829 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.42
CLCN4-201ENST00000380829 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.42
CLCN4-201ENST00000380829 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.42
CLCN4-201ENST00000380829 DBF4Q9UBU7 674 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms