RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 SOS1Q07889 1333 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 FANCIQ9NVI1 1328 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 PLEKHH1Q9ULM0 1364 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 TMPOP42166 694 aaKnown RBP8.42□□□□□ -1.06
CCDC171-201ENST00000380701 LRRC27Q9C0I9 530 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 C14orf93Q9H972 538 aaKnown RBP8.42□□□□□ -1.06
CCDC171-201ENST00000380701 IL16Q14005 1332 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 STXBP4Q6ZWJ1 553 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 CAGE1Q8TC20 777 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 POLD1P28340 1107 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 FKBP4Q02790 459 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCDC171-201ENST00000380701 GSE1Q14687 1217 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 PPFIBP1Q86W92 1011 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 TMEM266Q2M3C6 531 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 MTERF4Q7Z6M4 381 aaKnown RBP8.42□□□□□ -1.06
CCDC171-201ENST00000380701 MKNK2Q9HBH9 465 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
CCDC171-201ENST00000380701 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
CCDC171-201ENST00000380701 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 DUSP27Q5VZP5 1158 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 ZNF444Q8N0Y2 327 aaPredicted RBP8.41□□□□□ -1.06
CCDC171-201ENST00000380701 CCDC192P0DO97 292 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 KIF5BP33176 963 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
CCDC171-201ENST00000380701 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 NF2P35240 595 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 MRE11P49959 708 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 HMGN5P82970 282 aaKnown RBP8.41□□□□□ -1.06
CCDC171-201ENST00000380701 NYXQ9GZU5 481 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 NUP160Q12769 1436 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 SMTNL1A8MU46 457 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 CEP57L1Q8IYX8 460 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 PDZRN3Q9UPQ7 1066 aa8.41□□□□□ -1.06
CCDC171-201ENST00000380701 PLCH2O75038 1416 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 IDH1O75874 414 aaKnown RBP8.4□□□□□ -1.06
CCDC171-201ENST00000380701 NUP133Q8WUM0 1156 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 DNAAF4Q8WXU2 420 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-201ENST00000380701 NAIPQ13075 1403 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 SNRPA1P09661 255 aaKnown RBP8.4□□□□□ -1.06
CCDC171-201ENST00000380701 CCDC150Q8NCX0 1101 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 NAPBQ9H115 298 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.06
CCDC171-201ENST00000380701 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 UBAP1LF5GYI3 381 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 RFC4P35249 363 aa8.4□□□□□ -1.06
CCDC171-201ENST00000380701 NEBLO76041 1014 aa8.4□□□□□ -1.07
CCDC171-201ENST00000380701 IDI1Q13907 227 aa8.4□□□□□ -1.07
CCDC171-201ENST00000380701 CHD1LQ86WJ1 897 aa8.4□□□□□ -1.07
CCDC171-201ENST00000380701 PDRG1Q9NUG6 133 aa8.4□□□□□ -1.07
CCDC171-201ENST00000380701 PIK3R4Q99570 1358 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 TSG101Q99816 390 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 GTPBP4Q9BZE4 634 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 CCDC152Q4G0S7 254 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 BICDL1Q6ZP65 573 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 VPS36Q86VN1 386 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 ZFYP08048 801 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 PDE4BQ07343 736 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 PDILTQ8N807 584 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 CWC25Q9NXE8 425 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 ABCC5O15440 1437 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 KDM5BQ9UGL1 1544 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 DHX37Q8IY37 1157 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 LRRC59Q96AG4 307 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 DEF6Q9H4E7 631 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 ABCC10Q5T3U5 1492 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 CDK13Q14004 1512 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 FOXO3O43524 673 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 EZRP15311 586 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 CETN1Q12798 172 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 RRS1Q15050 365 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 SIL1Q9H173 461 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
CCDC171-201ENST00000380701 ABCF2Q9UG63 623 aa8.39□□□□□ -1.07
CCDC171-201ENST00000380701 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 TSPY26PQ9H489 355 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 C19orf44Q9H6X5 657 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 BMP15O95972 392 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 LARP1BQ659C4 914 aaKnown RBP8.38□□□□□ -1.07
CCDC171-201ENST00000380701 TRIM5Q9C035 493 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 DUOX2Q9NRD8 1548 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 PLCG2P16885 1265 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 ME1P48163 572 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-201ENST00000380701 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-201ENST00000380701 ZNF592Q92610 1267 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 EYA3Q99504 573 aa8.38□□□□□ -1.07
CCDC171-201ENST00000380701 ZNF397Q8NF99 534 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-201ENST00000380701 NOM1Q5C9Z4 860 aaKnown RBP8.38□□□□□ -1.07
CCDC171-201ENST00000380701 GNAQP50148 359 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 USP37Q86T82 979 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 A2MP01023 1474 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms