RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 NFATC2IPQ8NCF5 419 aa35.89■■■■□ 3.34
TRAPPC10-202ENST00000380221 BABAM1Q9NWV8 329 aa35.89■■■■□ 3.34
TRAPPC10-202ENST00000380221 RCAN3Q9UKA8 241 aa35.89■■■■□ 3.34
TRAPPC10-202ENST00000380221 MRC1P22897 1456 aa35.88■■■■□ 3.33
TRAPPC10-202ENST00000380221 BTBD11A6QL63 1104 aa35.88■■■■□ 3.33
TRAPPC10-202ENST00000380221 MARCH10Q8NA82 808 aaPredicted RBP35.88■■■■□ 3.33
TRAPPC10-202ENST00000380221 TOGARAM1Q9Y4F4 1720 aa35.87■■■■□ 3.33
TRAPPC10-202ENST00000380221 ONECUT3O60422 494 aaPredicted RBP35.86■■■■□ 3.33
TRAPPC10-202ENST00000380221 CABP4P57796 275 aa35.86■■■■□ 3.33
TRAPPC10-202ENST00000380221 ERVV-2B6SEH9 535 aa35.85■■■■□ 3.33
TRAPPC10-202ENST00000380221 KDM3BQ7LBC6 1761 aa35.84■■■■□ 3.33
TRAPPC10-202ENST00000380221 KRT24Q2M2I5 525 aa35.84■■■■□ 3.33
TRAPPC10-202ENST00000380221 C8orf58Q8NAV2 365 aa35.84■■■■□ 3.33
TRAPPC10-202ENST00000380221 TSPYL6Q8N831 410 aa35.83■■■■□ 3.33
TRAPPC10-202ENST00000380221 ELL2O00472 640 aaPredicted RBP35.82■■■■□ 3.33
TRAPPC10-202ENST00000380221 KCNQ3O43525 872 aa35.81■■■■□ 3.32
TRAPPC10-202ENST00000380221 RNF123Q5XPI4 1314 aa35.81■■■■□ 3.32
TRAPPC10-202ENST00000380221 SEPT12Q8IYM1 358 aa35.81■■■■□ 3.32
TRAPPC10-202ENST00000380221 IRX6P78412 446 aaPredicted RBP35.79■■■■□ 3.32
TRAPPC10-202ENST00000380221 RGS17Q9UGC6 210 aaPredicted RBP35.79■■■■□ 3.32
TRAPPC10-202ENST00000380221 CT47B1P0C2W7 299 aaPredicted RBP35.78■■■■□ 3.32
TRAPPC10-202ENST00000380221 SLC39A6Q13433 755 aa35.78■■■■□ 3.32
TRAPPC10-202ENST00000380221 TWISTNBQ3B726 338 aaPredicted RBP35.78■■■■□ 3.32
TRAPPC10-202ENST00000380221 RBM6P78332 1123 aaKnown RBP35.77■■■■□ 3.32
TRAPPC10-202ENST00000380221 VAMP4O75379 141 aa35.76■■■■□ 3.32
TRAPPC10-202ENST00000380221 DOT1LQ8TEK3 1739 aa35.76■■■■□ 3.32
TRAPPC10-202ENST00000380221 ITGB4P16144 1822 aa35.76■■■■□ 3.32
TRAPPC10-202ENST00000380221 ILDR1Q86SU0 546 aaPredicted RBP35.75■■■■□ 3.31
TRAPPC10-202ENST00000380221 EIF4A1P60842 406 aaKnown RBP35.74■■■■□ 3.31
TRAPPC10-202ENST00000380221 ZNF790Q6PG37 636 aa35.74■■■■□ 3.31
TRAPPC10-202ENST00000380221 TMOD3Q9NYL9 352 aa35.74■■■■□ 3.31
TRAPPC10-202ENST00000380221 RARSP54136 660 aaKnown RBP35.74■■■■□ 3.31
TRAPPC10-202ENST00000380221 KAT6BQ8WYB5 2073 aa35.73■■■■□ 3.31
TRAPPC10-202ENST00000380221 BCAR3O75815 825 aa35.71■■■■□ 3.31
TRAPPC10-202ENST00000380221 PIGBQ92521 554 aa35.71■■■■□ 3.31
TRAPPC10-202ENST00000380221 SYTL4Q96C24 671 aaPredicted RBP35.71■■■■□ 3.31
TRAPPC10-202ENST00000380221 ACSBG1Q96GR2 724 aa35.71■■■■□ 3.31
TRAPPC10-202ENST00000380221 PRIM1P49642 420 aaKnown RBP35.71■■■■□ 3.31
TRAPPC10-202ENST00000380221 FAM182BQ5T319 152 aa35.69■■■■□ 3.3
TRAPPC10-202ENST00000380221 BCL2L13Q9BXK5 485 aa35.69■■■■□ 3.3
TRAPPC10-202ENST00000380221 RXRBP28702 533 aa35.68■■■■□ 3.3
TRAPPC10-202ENST00000380221 TTC5Q8N0Z6 440 aa35.68■■■■□ 3.3
TRAPPC10-202ENST00000380221 BCL9O00512 1426 aa35.68■■■■□ 3.3
TRAPPC10-202ENST00000380221 POTEAQ6S8J7 498 aa35.67■■■■□ 3.3
TRAPPC10-202ENST00000380221 BRWD3Q6RI45 1802 aa35.67■■■■□ 3.3
TRAPPC10-202ENST00000380221 SSH1Q8WYL5 1049 aa35.66■■■■□ 3.3
TRAPPC10-202ENST00000380221 PAPPAQ13219 1627 aa35.66■■■■□ 3.3
TRAPPC10-202ENST00000380221 RRP1P56182 461 aaKnown RBP35.66■■■■□ 3.3
TRAPPC10-202ENST00000380221 ZNF428Q96B54 188 aa35.65■■■■□ 3.3
TRAPPC10-202ENST00000380221 ZNF496Q96IT1 587 aaPredicted RBP35.64■■■■□ 3.3
TRAPPC10-202ENST00000380221 HEG1Q9ULI3 1381 aa35.64■■■■□ 3.3
TRAPPC10-202ENST00000380221 TCERG1O14776 1098 aaKnown RBP35.64■■■■□ 3.3
TRAPPC10-202ENST00000380221 ERICH6BQ5W0A0 696 aa35.63■■■■□ 3.29
TRAPPC10-202ENST00000380221 SMC4Q9NTJ3 1288 aa35.63■■■■□ 3.29
TRAPPC10-202ENST00000380221 ALDH1L2Q3SY69 923 aa35.62■■■■□ 3.29
TRAPPC10-202ENST00000380221 ASAP1Q9ULH1 1129 aa35.62■■■■□ 3.29
TRAPPC10-202ENST00000380221 KCNQ2O43526 872 aa35.61■■■■□ 3.29
TRAPPC10-202ENST00000380221 UBR2Q8IWV8 1755 aa35.61■■■■□ 3.29
TRAPPC10-202ENST00000380221 PLIN1O60240 522 aa35.61■■■■□ 3.29
TRAPPC10-202ENST00000380221 GIGYF1O75420 1035 aaPredicted RBP35.61■■■■□ 3.29
TRAPPC10-202ENST00000380221 KRT27Q7Z3Y8 459 aa35.6■■■■□ 3.29
TRAPPC10-202ENST00000380221 ATG3Q9NT62 314 aa35.6■■■■□ 3.29
TRAPPC10-202ENST00000380221 SOS1Q07889 1333 aaPredicted RBP35.6■■■■□ 3.29
TRAPPC10-202ENST00000380221 PRAMEF22A3QJZ6 481 aa35.59■■■■□ 3.29
TRAPPC10-202ENST00000380221 FMNL2Q96PY5 1086 aa35.59■■■■□ 3.29
TRAPPC10-202ENST00000380221 KCPQ6ZWJ8 1503 aa35.58■■■■□ 3.29
TRAPPC10-202ENST00000380221 NECTIN2Q92692 538 aa35.58■■■■□ 3.29
TRAPPC10-202ENST00000380221 HOXB7P09629 217 aa35.57■■■■□ 3.28
TRAPPC10-202ENST00000380221 PTCD1O75127 700 aaKnown RBP35.56■■■■□ 3.28
TRAPPC10-202ENST00000380221 C5P01031 1676 aa35.56■■■■□ 3.28
TRAPPC10-202ENST00000380221 EIF2S2P20042 333 aaKnown RBP35.55■■■■□ 3.28
TRAPPC10-202ENST00000380221 MRPL50Q8N5N7 158 aaKnown RBP35.55■■■■□ 3.28
TRAPPC10-202ENST00000380221 HDGFL1Q5TGJ6 251 aa35.54■■■■□ 3.28
TRAPPC10-202ENST00000380221 FRAT1Q92837 279 aaPredicted RBP35.54■■■■□ 3.28
TRAPPC10-202ENST00000380221 RGS12O14924 1447 aa35.54■■■■□ 3.28
TRAPPC10-202ENST00000380221 SNRPA1P09661 255 aaKnown RBP35.53■■■■□ 3.28
TRAPPC10-202ENST00000380221 CCDC30Q5VVM6 783 aa35.53■■■■□ 3.28
TRAPPC10-202ENST00000380221 PTF1AQ7RTS3 328 aa35.52■■■■□ 3.28
TRAPPC10-202ENST00000380221 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.52■■■■□ 3.28
TRAPPC10-202ENST00000380221 SBF2Q86WG5 1849 aa35.52■■■■□ 3.28
TRAPPC10-202ENST00000380221 NHSQ6T4R5 1651 aa35.51■■■■□ 3.28
TRAPPC10-202ENST00000380221 BRPF1P55201 1214 aaPredicted RBP35.5■■■■□ 3.27
TRAPPC10-202ENST00000380221 CANXP27824 592 aaKnown RBP35.49■■■■□ 3.27
TRAPPC10-202ENST00000380221 RBM42Q9BTD8 480 aaKnown RBP35.49■■■■□ 3.27
TRAPPC10-202ENST00000380221 NOB1Q9ULX3 412 aaKnown RBP35.49■■■■□ 3.27
TRAPPC10-202ENST00000380221 SLC4A2P04920 1241 aa35.48■■■■□ 3.27
TRAPPC10-202ENST00000380221 FAM196AQ6ZSG2 479 aa35.48■■■■□ 3.27
TRAPPC10-202ENST00000380221 STK31Q9BXU1 1019 aa35.48■■■■□ 3.27
TRAPPC10-202ENST00000380221 USP16Q9Y5T5 823 aa35.48■■■■□ 3.27
TRAPPC10-202ENST00000380221 KIF16BQ96L93 1317 aa35.46■■■■□ 3.27
TRAPPC10-202ENST00000380221 C20orf194Q5TEA3 1177 aa35.45■■■■□ 3.27
TRAPPC10-202ENST00000380221 BTAF1O14981 1849 aa35.44■■■■□ 3.26
TRAPPC10-202ENST00000380221 CHMP4AQ9BY43 222 aa35.44■■■■□ 3.26
TRAPPC10-202ENST00000380221 PPP4R2Q9NY27 417 aa35.44■■■■□ 3.26
TRAPPC10-202ENST00000380221 CHPF2Q9P2E5 772 aa35.44■■■■□ 3.26
TRAPPC10-202ENST00000380221 LAMB4A4D0S4 1761 aa35.43■■■■□ 3.26
TRAPPC10-202ENST00000380221 ZKSCAN2Q63HK3 967 aa35.43■■■■□ 3.26
TRAPPC10-202ENST00000380221 SLC4A9Q96Q91 983 aa35.43■■■■□ 3.26
TRAPPC10-202ENST00000380221 TNNQ9UQP3 1299 aa35.43■■■■□ 3.26
TRAPPC10-202ENST00000380221 EP400Q96L91 3159 aa35.43■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms