RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SCN11AQ9UI33 1791 aa25.06■■□□□ 1.6
PDLIM5-205ENST00000380180 MEGF6O75095 1541 aa25.06■■□□□ 1.6
PDLIM5-205ENST00000380180 SMC5Q8IY18 1101 aa25.06■■□□□ 1.6
PDLIM5-205ENST00000380180 KCNQ3O43525 872 aa25.05■■□□□ 1.6
PDLIM5-205ENST00000380180 FAM161AQ3B820 660 aa25.05■■□□□ 1.6
PDLIM5-205ENST00000380180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.04■■□□□ 1.67e-7■■■■□ 21.5
PDLIM5-205ENST00000380180 SPG7Q9UQ90 795 aa25.04■■□□□ 1.6
PDLIM5-205ENST00000380180 C8orf34Q49A92 452 aa25.03■■□□□ 1.6
PDLIM5-205ENST00000380180 HDGFL1Q5TGJ6 251 aa25.03■■□□□ 1.6
PDLIM5-205ENST00000380180 F6X3S4 739 aa25.02■■□□□ 1.6
PDLIM5-205ENST00000380180 FLIIQ13045 1269 aa25.02■■□□□ 1.6
PDLIM5-205ENST00000380180 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
PDLIM5-205ENST00000380180 PKD1L3Q7Z443 1732 aa25.01■■□□□ 1.59
PDLIM5-205ENST00000380180 PHKG2P15735 406 aa25■■□□□ 1.59
PDLIM5-205ENST00000380180 SIRT2Q8IXJ6 389 aa25■■□□□ 1.59
PDLIM5-205ENST00000380180 HOXB7P09629 217 aa25■■□□□ 1.59
PDLIM5-205ENST00000380180 PLEKHG2Q9H7P9 1386 aa24.99■■□□□ 1.59
PDLIM5-205ENST00000380180 WDR17Q8IZU2 1322 aa24.99■■□□□ 1.59
PDLIM5-205ENST00000380180 EIF2S2P20042 333 aaKnown RBP24.99■■□□□ 1.59
PDLIM5-205ENST00000380180 SLC4A10Q6U841 1118 aa24.99■■□□□ 1.59
PDLIM5-205ENST00000380180 FKBP5Q13451 457 aaPredicted RBP24.98■■□□□ 1.59
PDLIM5-205ENST00000380180 IFNL2Q8IZJ0 200 aa24.98■■□□□ 1.59
PDLIM5-205ENST00000380180 COL5A2P05997 1499 aaPredicted RBP24.98■■□□□ 1.59
PDLIM5-205ENST00000380180 ROBO1Q9Y6N7 1651 aa24.97■■□□□ 1.59
PDLIM5-205ENST00000380180 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
PDLIM5-205ENST00000380180 ANP32AP39687 249 aaKnown RBP24.97■■□□□ 1.59
PDLIM5-205ENST00000380180 CCT4P50991 539 aaKnown RBP24.97■■□□□ 1.59
PDLIM5-205ENST00000380180 TOM1L2Q6ZVM7 507 aa24.97■■□□□ 1.59
PDLIM5-205ENST00000380180 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.59
PDLIM5-205ENST00000380180 CYP27B1O15528 508 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 MSH5O43196 834 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 MEIS3Q99687 375 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 CHMP4AQ9BY43 222 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 N4BP2Q86UW6 1770 aaPredicted RBP24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 NUCB1Q02818 461 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 NPM2Q86SE8 214 aaKnown RBP24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 GCC1Q96CN9 775 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 PHAXQ9H814 394 aaKnown RBP24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 SLC52A2Q9HAB3 445 aa24.95■■□□□ 1.58
PDLIM5-205ENST00000380180 HEG1Q9ULI3 1381 aa24.94■■□□□ 1.58
PDLIM5-205ENST00000380180 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
PDLIM5-205ENST00000380180 GIGYF1O75420 1035 aaPredicted RBP24.93■■□□□ 1.58
PDLIM5-205ENST00000380180 NFATC2IPQ8NCF5 419 aa24.93■■□□□ 1.58
PDLIM5-205ENST00000380180 CHPF2Q9P2E5 772 aa24.93■■□□□ 1.58
PDLIM5-205ENST00000380180 DCAF5Q96JK2 942 aa24.91■■□□□ 1.58
PDLIM5-205ENST00000380180 ATP10DQ9P241 1426 aa24.91■■□□□ 1.58
PDLIM5-205ENST00000380180 CHD1LQ86WJ1 897 aa24.91■■□□□ 1.58
PDLIM5-205ENST00000380180 RPAP2Q8IXW5 612 aaPredicted RBP24.91■■□□□ 1.58
PDLIM5-205ENST00000380180 ANKRD44Q8N8A2 993 aa24.91■■□□□ 1.58
PDLIM5-205ENST00000380180 STRN4Q9NRL3 753 aa24.91■■□□□ 1.58
PDLIM5-205ENST00000380180 EVA1CP58658 441 aa24.9■■□□□ 1.58
PDLIM5-205ENST00000380180 SLC39A6Q13433 755 aa24.9■■□□□ 1.58
PDLIM5-205ENST00000380180 ZNF790Q6PG37 636 aa24.9■■□□□ 1.58
PDLIM5-205ENST00000380180 CARD10Q9BWT7 1032 aa24.9■■□□□ 1.58
PDLIM5-205ENST00000380180 LNPKQ9C0E8 428 aa24.9■■□□□ 1.58
PDLIM5-205ENST00000380180 HSP90AB1P08238 724 aaKnown RBP24.89■■□□□ 1.57
PDLIM5-205ENST00000380180 ANKRD45Q5TZF3 282 aa24.89■■□□□ 1.57
PDLIM5-205ENST00000380180 CEP85Q6P2H3 762 aa24.89■■□□□ 1.57
PDLIM5-205ENST00000380180 LARP1Q6PKG0 1096 aaKnown RBP24.89■■□□□ 1.57
PDLIM5-205ENST00000380180 AHDC1Q5TGY3 1603 aaPredicted RBP24.88■■□□□ 1.57
PDLIM5-205ENST00000380180 PRAMEF22A3QJZ6 481 aa24.88■■□□□ 1.57
PDLIM5-205ENST00000380180 PXDNLA1KZ92 1463 aa24.87■■□□□ 1.57
PDLIM5-205ENST00000380180 ZCRB1Q8TBF4 217 aaKnown RBP24.87■■□□□ 1.57
PDLIM5-205ENST00000380180 DCTPP1Q9H773 170 aa24.87■■□□□ 1.57
PDLIM5-205ENST00000380180 DBF4Q9UBU7 674 aaPredicted RBP24.87■■□□□ 1.57
PDLIM5-205ENST00000380180 MRC1P22897 1456 aa24.87■■□□□ 1.57
PDLIM5-205ENST00000380180 ANXA1P04083 346 aa24.86■■□□□ 1.57
PDLIM5-205ENST00000380180 IPO9Q96P70 1041 aaKnown RBP24.86■■□□□ 1.57
PDLIM5-205ENST00000380180 IL2RBP14784 551 aa24.85■■□□□ 1.57
PDLIM5-205ENST00000380180 C5P01031 1676 aa24.85■■□□□ 1.57
PDLIM5-205ENST00000380180 PCDH11XQ9BZA7 1347 aa24.84■■□□□ 1.57
PDLIM5-205ENST00000380180 PCDH11YQ9BZA8 1340 aa24.84■■□□□ 1.57
PDLIM5-205ENST00000380180 SHANK3Q9BYB0 1731 aa24.84■■□□□ 1.57
PDLIM5-205ENST00000380180 GNAI2P04899 355 aa24.83■■□□□ 1.56
PDLIM5-205ENST00000380180 GNAI3P08754 354 aa24.83■■□□□ 1.56
PDLIM5-205ENST00000380180 CABP4P57796 275 aa24.83■■□□□ 1.56
PDLIM5-205ENST00000380180 COL22A1Q8NFW1 1626 aaPredicted RBP24.82■■□□□ 1.56
PDLIM5-205ENST00000380180 BTG4Q9NY30 223 aa24.82■■□□□ 1.56
PDLIM5-205ENST00000380180 PI4KAP2A4QPH2 592 aa24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 PROSER3Q2NL68 480 aa24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 PI4KAP1Q8N8J0 262 aa24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 COL14A1Q05707 1796 aaKnown RBP24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 SEC24BO95487 1268 aa24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 ZNF496Q96IT1 587 aaPredicted RBP24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 USP44Q9H0E7 712 aa24.81■■□□□ 1.56
PDLIM5-205ENST00000380180 TTC5Q8N0Z6 440 aa24.79■■□□□ 1.56
PDLIM5-205ENST00000380180 DNAAF4Q8WXU2 420 aa24.79■■□□□ 1.56
PDLIM5-205ENST00000380180 SRCIN1Q9C0H9 1055 aa24.79■■□□□ 1.56
PDLIM5-205ENST00000380180 HYPKQ9NX55 129 aa24.79■■□□□ 1.56
PDLIM5-205ENST00000380180 USP35Q9P2H5 1018 aa24.79■■□□□ 1.56
PDLIM5-205ENST00000380180 ADCY9O60503 1353 aa24.78■■□□□ 1.56
PDLIM5-205ENST00000380180 PHLPP1O60346 1717 aa24.78■■□□□ 1.56
PDLIM5-205ENST00000380180 HMMRO75330 724 aa24.78■■□□□ 1.56
PDLIM5-205ENST00000380180 DDX21Q9NR30 783 aaKnown RBP eCLIP24.78■■□□□ 1.56
PDLIM5-205ENST00000380180 COL16A1Q07092 1604 aaPredicted RBP24.77■■□□□ 1.56
PDLIM5-205ENST00000380180 NKX1-1Q15270 411 aaPredicted RBP24.77■■□□□ 1.56
PDLIM5-205ENST00000380180 BEND3Q5T5X7 828 aa24.77■■□□□ 1.56
PDLIM5-205ENST00000380180 DDX54Q8TDD1 881 aaKnown RBP24.77■■□□□ 1.56
PDLIM5-205ENST00000380180 PDIA6Q15084 440 aa24.76■■□□□ 1.55
PDLIM5-205ENST00000380180 FMNL2Q96PY5 1086 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms