RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
RFC3-201ENST00000380071 ERC2O15083 957 aa14.95□□□□□ -0.02
RFC3-201ENST00000380071 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
RFC3-201ENST00000380071 PKP1Q13835 747 aa14.95□□□□□ -0.02
RFC3-201ENST00000380071 SKOR2Q2VWA4 1001 aaPredicted RBP14.94□□□□□ -0.02
RFC3-201ENST00000380071 REC8O95072 547 aa14.94□□□□□ -0.02
RFC3-201ENST00000380071 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
RFC3-201ENST00000380071 CLEC17AQ6ZS10 378 aa14.94□□□□□ -0.02
RFC3-201ENST00000380071 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
RFC3-201ENST00000380071 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
RFC3-201ENST00000380071 ZGPATQ8N5A5 531 aaKnown RBP14.93□□□□□ -0.02
RFC3-201ENST00000380071 LRRCC1Q9C099 1032 aa14.93□□□□□ -0.02
RFC3-201ENST00000380071 NWD1Q149M9 1564 aa14.93□□□□□ -0.02
RFC3-201ENST00000380071 SALL3Q9BXA9 1300 aa14.93□□□□□ -0.02
RFC3-201ENST00000380071 GNAI3P08754 354 aa14.93□□□□□ -0.02
RFC3-201ENST00000380071 LRRFIP2Q9Y608 721 aaKnown RBP14.93□□□□□ -0.02
RFC3-201ENST00000380071 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
RFC3-201ENST00000380071 MAP3K5Q99683 1374 aa14.92□□□□□ -0.02
RFC3-201ENST00000380071 ST18O60284 1047 aa14.92□□□□□ -0.02
RFC3-201ENST00000380071 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
RFC3-201ENST00000380071 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
RFC3-201ENST00000380071 CYP2E1P05181 493 aaPredicted RBP14.91□□□□□ -0.02
RFC3-201ENST00000380071 PTMSP20962 102 aa14.91□□□□□ -0.02
RFC3-201ENST00000380071 MARF1Q9Y4F3 1742 aaKnown RBP14.91□□□□□ -0.02
RFC3-201ENST00000380071 PRKCSHP14314 528 aaPredicted RBP14.91□□□□□ -0.02
RFC3-201ENST00000380071 MX1P20591 662 aa14.91□□□□□ -0.02
RFC3-201ENST00000380071 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
RFC3-201ENST00000380071 LRRC37A3O60309 1634 aa14.9□□□□□ -0.02
RFC3-201ENST00000380071 GOLGA6L22H0YM25 854 aa14.9□□□□□ -0.02
RFC3-201ENST00000380071 NUCB2P80303 420 aa14.9□□□□□ -0.02
RFC3-201ENST00000380071 RILPL2Q969X0 211 aa14.9□□□□□ -0.02
RFC3-201ENST00000380071 ISY1Q9ULR0 285 aaKnown RBP14.9□□□□□ -0.02
RFC3-201ENST00000380071 DDX49Q9Y6V7 483 aaKnown RBP14.9□□□□□ -0.02
RFC3-201ENST00000380071 XRN1Q8IZH2 1706 aaKnown RBP14.9□□□□□ -0.02
RFC3-201ENST00000380071 IBTKQ9P2D0 1353 aaPredicted RBP14.89□□□□□ -0.03
RFC3-201ENST00000380071 ANKARQ7Z5J8 1434 aa14.89□□□□□ -0.03
RFC3-201ENST00000380071 FAM208AQ9UK61 1670 aaKnown RBP14.89□□□□□ -0.03
RFC3-201ENST00000380071 TRIM6-TRIM34B2RNG4 842 aa14.89□□□□□ -0.03
RFC3-201ENST00000380071 HDGFL1Q5TGJ6 251 aa14.89□□□□□ -0.03
RFC3-201ENST00000380071 ESYT1Q9BSJ8 1104 aa14.89□□□□□ -0.03
RFC3-201ENST00000380071 EIF2S2P20042 333 aaKnown RBP14.88□□□□□ -0.03
RFC3-201ENST00000380071 UNC5CLQ8IV45 518 aa14.88□□□□□ -0.03
RFC3-201ENST00000380071 LGR6Q9HBX8 967 aa14.88□□□□□ -0.03
RFC3-201ENST00000380071 ZDHHC9Q9Y397 364 aa14.88□□□□□ -0.03
RFC3-201ENST00000380071 NEK4P51957 841 aa14.88□□□□□ -0.03
RFC3-201ENST00000380071 CWC22Q9HCG8 908 aaKnown RBP14.88□□□□□ -0.03
RFC3-201ENST00000380071 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
RFC3-201ENST00000380071 UBTFL1P0CB47 393 aaPredicted RBP14.87□□□□□ -0.03
RFC3-201ENST00000380071 CHMLP26374 656 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 KLHL40Q2TBA0 621 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 PALD1Q9ULE6 856 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 SETD1BQ9UPS6 1966 aaKnown RBP14.87□□□□□ -0.03
RFC3-201ENST00000380071 CHAMP1Q96JM3 812 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 LMBRD1Q9NUN5 540 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 BABAM1Q9NWV8 329 aa14.87□□□□□ -0.03
RFC3-201ENST00000380071 ZBTB7CA1YPR0 619 aa14.86□□□□□ -0.03
RFC3-201ENST00000380071 KCNQ3O43525 872 aa14.86□□□□□ -0.03
RFC3-201ENST00000380071 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
RFC3-201ENST00000380071 PHF8Q9UPP1 1060 aa14.86□□□□□ -0.03
RFC3-201ENST00000380071 NUTM1Q86Y26 1132 aa14.86□□□□□ -0.03
RFC3-201ENST00000380071 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
RFC3-201ENST00000380071 NCLP19338 710 aaKnown RBP14.85□□□□□ -0.03
RFC3-201ENST00000380071 IP6K1Q92551 441 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 ANO2Q9NQ90 1003 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 EIF4A1P60842 406 aaKnown RBP14.85□□□□□ -0.03
RFC3-201ENST00000380071 PPP1R42Q7Z4L9 355 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 TMX3Q96JJ7 454 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 IL25Q9H293 177 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 TUBGCP6Q96RT7 1819 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 FER1L4A9Z1Z3 1794 aa14.85□□□□□ -0.03
RFC3-201ENST00000380071 PRPF40AO75400 957 aaKnown RBP14.84□□□□□ -0.03
RFC3-201ENST00000380071 SURF6O75683 361 aaKnown RBP14.84□□□□□ -0.03
RFC3-201ENST00000380071 MAP4K4O95819 1239 aaPredicted RBP14.84□□□□□ -0.03
RFC3-201ENST00000380071 ANXA1P04083 346 aa14.84□□□□□ -0.03
RFC3-201ENST00000380071 NBPF7P0C2Y1 421 aaPredicted RBP14.84□□□□□ -0.03
RFC3-201ENST00000380071 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
RFC3-201ENST00000380071 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
RFC3-201ENST00000380071 CHPF2Q9P2E5 772 aa14.84□□□□□ -0.03
RFC3-201ENST00000380071 CEMIPQ8WUJ3 1361 aa14.84□□□□□ -0.03
RFC3-201ENST00000380071 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
RFC3-201ENST00000380071 CAVIN1Q6NZI2 390 aaKnown RBP14.83□□□□□ -0.04
RFC3-201ENST00000380071 NOL8Q76FK4 1167 aaKnown RBP14.83□□□□□ -0.04
RFC3-201ENST00000380071 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.04
RFC3-201ENST00000380071 SRCIN1Q9C0H9 1055 aa14.83□□□□□ -0.04
RFC3-201ENST00000380071 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 LTN1O94822 1766 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 ERBB4Q15303 1308 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 CLCN1P35523 988 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 POLA2Q14181 598 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
RFC3-201ENST00000380071 USP54Q70EL1 1684 aa14.81□□□□□ -0.04
RFC3-201ENST00000380071 SRGAP3O43295 1099 aa14.81□□□□□ -0.04
RFC3-201ENST00000380071 PSME1Q06323 249 aa14.81□□□□□ -0.04
RFC3-201ENST00000380071 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms