RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 MYH16Q9H6N6 1097 aa18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
HERPUD1-203ENST00000379792 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
HERPUD1-203ENST00000379792 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
HERPUD1-203ENST00000379792 CHL1O00533 1208 aa18.35■□□□□ 0.53
HERPUD1-203ENST00000379792 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
HERPUD1-203ENST00000379792 CABP4P57796 275 aa18.34■□□□□ 0.53
HERPUD1-203ENST00000379792 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
HERPUD1-203ENST00000379792 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.53
HERPUD1-203ENST00000379792 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.53
HERPUD1-203ENST00000379792 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
HERPUD1-203ENST00000379792 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
HERPUD1-203ENST00000379792 KCNQ3O43525 872 aa18.31■□□□□ 0.52
HERPUD1-203ENST00000379792 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 ACSBG1Q96GR2 724 aa18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 ADAMTS7Q9UKP4 1686 aa18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 KRT24Q2M2I5 525 aa18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
HERPUD1-203ENST00000379792 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
HERPUD1-203ENST00000379792 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-203ENST00000379792 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
HERPUD1-203ENST00000379792 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
HERPUD1-203ENST00000379792 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.52
HERPUD1-203ENST00000379792 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.51
HERPUD1-203ENST00000379792 FAM196AQ6ZSG2 479 aa18.27■□□□□ 0.51
HERPUD1-203ENST00000379792 TSPYL6Q8N831 410 aa18.27■□□□□ 0.51
HERPUD1-203ENST00000379792 PIGBQ92521 554 aa18.27■□□□□ 0.51
HERPUD1-203ENST00000379792 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
HERPUD1-203ENST00000379792 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
HERPUD1-203ENST00000379792 MRC1P22897 1456 aa18.25■□□□□ 0.51
HERPUD1-203ENST00000379792 KCNQ2O43526 872 aa18.25■□□□□ 0.51
HERPUD1-203ENST00000379792 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
HERPUD1-203ENST00000379792 ZNF790Q6PG37 636 aa18.24■□□□□ 0.51
HERPUD1-203ENST00000379792 SIPA1L3O60292 1781 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-203ENST00000379792 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
HERPUD1-203ENST00000379792 PTF1AQ7RTS3 328 aa18.23■□□□□ 0.51
HERPUD1-203ENST00000379792 RCAN3Q9UKA8 241 aa18.23■□□□□ 0.51
HERPUD1-203ENST00000379792 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
HERPUD1-203ENST00000379792 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
HERPUD1-203ENST00000379792 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
HERPUD1-203ENST00000379792 DOT1LQ8TEK3 1739 aa18.22■□□□□ 0.51
HERPUD1-203ENST00000379792 BCL9O00512 1426 aa18.21■□□□□ 0.51
HERPUD1-203ENST00000379792 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-203ENST00000379792 VAMP4O75379 141 aa18.21■□□□□ 0.51
HERPUD1-203ENST00000379792 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-203ENST00000379792 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-203ENST00000379792 BAG6P46379 1132 aa18.2■□□□□ 0.5
HERPUD1-203ENST00000379792 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
HERPUD1-203ENST00000379792 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
HERPUD1-203ENST00000379792 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-203ENST00000379792 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
HERPUD1-203ENST00000379792 ITGB4P16144 1822 aa18.19■□□□□ 0.5
HERPUD1-203ENST00000379792 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
HERPUD1-203ENST00000379792 NECTIN2Q92692 538 aa18.19■□□□□ 0.5
HERPUD1-203ENST00000379792 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-203ENST00000379792 RARSP54136 660 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-203ENST00000379792 DEFB132Q7Z7B7 95 aa18.18■□□□□ 0.5
HERPUD1-203ENST00000379792 BCAR3O75815 825 aa18.17■□□□□ 0.5
HERPUD1-203ENST00000379792 FMNL2Q96PY5 1086 aa18.17■□□□□ 0.5
HERPUD1-203ENST00000379792 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
HERPUD1-203ENST00000379792 TRIM37O94972 964 aa18.17■□□□□ 0.5
HERPUD1-203ENST00000379792 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
HERPUD1-203ENST00000379792 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-203ENST00000379792 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
HERPUD1-203ENST00000379792 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
HERPUD1-203ENST00000379792 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
HERPUD1-203ENST00000379792 SMC4Q9NTJ3 1288 aa18.14■□□□□ 0.49
HERPUD1-203ENST00000379792 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
HERPUD1-203ENST00000379792 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
HERPUD1-203ENST00000379792 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
HERPUD1-203ENST00000379792 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
HERPUD1-203ENST00000379792 SBF2Q86WG5 1849 aa18.13■□□□□ 0.49
HERPUD1-203ENST00000379792 PAPPAQ13219 1627 aa18.13■□□□□ 0.49
HERPUD1-203ENST00000379792 PLIN1O60240 522 aa18.12■□□□□ 0.49
HERPUD1-203ENST00000379792 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-203ENST00000379792 SLC4A9Q96Q91 983 aa18.12■□□□□ 0.49
HERPUD1-203ENST00000379792 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-203ENST00000379792 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
HERPUD1-203ENST00000379792 APBA3O96018 575 aa18.11■□□□□ 0.49
HERPUD1-203ENST00000379792 HOXB7P09629 217 aa18.11■□□□□ 0.49
HERPUD1-203ENST00000379792 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 CAMKK2Q96RR4 588 aa18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 NHSQ6T4R5 1651 aa18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
HERPUD1-203ENST00000379792 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
HERPUD1-203ENST00000379792 ANXA1P04083 346 aa18.09■□□□□ 0.49
HERPUD1-203ENST00000379792 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
HERPUD1-203ENST00000379792 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
HERPUD1-203ENST00000379792 KCNQ4P56696 695 aa18.09■□□□□ 0.49
HERPUD1-203ENST00000379792 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
HERPUD1-203ENST00000379792 UBR2Q8IWV8 1755 aa18.08■□□□□ 0.49
HERPUD1-203ENST00000379792 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
HERPUD1-203ENST00000379792 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms