RNA–Protein interactions for RNA: ENST00000379721.3

SPINK4-201, Transcript of serine peptidase inhibitor, Kazal type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPINK4, Length 402 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK4-201ENST00000379721 ADAMTS7Q9UKP4 1686 aa16.7■□□□□ 0.26
SPINK4-201ENST00000379721 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
SPINK4-201ENST00000379721 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
SPINK4-201ENST00000379721 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
SPINK4-201ENST00000379721 MRC1P22897 1456 aa16.68■□□□□ 0.26
SPINK4-201ENST00000379721 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
SPINK4-201ENST00000379721 ITPK1Q13572 414 aa16.68■□□□□ 0.26
SPINK4-201ENST00000379721 COL23A1Q86Y22 540 aaPredicted RBP16.68■□□□□ 0.26
SPINK4-201ENST00000379721 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
SPINK4-201ENST00000379721 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
SPINK4-201ENST00000379721 AK7Q96M32 723 aa16.68■□□□□ 0.26
SPINK4-201ENST00000379721 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
SPINK4-201ENST00000379721 MSH5O43196 834 aa16.67■□□□□ 0.26
SPINK4-201ENST00000379721 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
SPINK4-201ENST00000379721 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
SPINK4-201ENST00000379721 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
SPINK4-201ENST00000379721 FLAD1Q8NFF5 587 aa16.66■□□□□ 0.26
SPINK4-201ENST00000379721 GAS2L2Q8NHY3 880 aa16.66■□□□□ 0.26
SPINK4-201ENST00000379721 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
SPINK4-201ENST00000379721 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
SPINK4-201ENST00000379721 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
SPINK4-201ENST00000379721 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
SPINK4-201ENST00000379721 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
SPINK4-201ENST00000379721 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
SPINK4-201ENST00000379721 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
SPINK4-201ENST00000379721 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
SPINK4-201ENST00000379721 ARXQ96QS3 562 aa16.65■□□□□ 0.26
SPINK4-201ENST00000379721 MAP3K5Q99683 1374 aa16.64■□□□□ 0.26
SPINK4-201ENST00000379721 POLD1P28340 1107 aa16.64■□□□□ 0.25
SPINK4-201ENST00000379721 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
SPINK4-201ENST00000379721 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
SPINK4-201ENST00000379721 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
SPINK4-201ENST00000379721 PHF14O94880 888 aa16.63■□□□□ 0.25
SPINK4-201ENST00000379721 TJP1Q07157 1748 aa16.62■□□□□ 0.25
SPINK4-201ENST00000379721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.62■□□□□ 0.25
SPINK4-201ENST00000379721 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
SPINK4-201ENST00000379721 GNPATO15228 680 aa16.62■□□□□ 0.25
SPINK4-201ENST00000379721 SSFA2P28290 1259 aa16.62■□□□□ 0.25
SPINK4-201ENST00000379721 RALBP1Q15311 655 aa16.62■□□□□ 0.25
SPINK4-201ENST00000379721 PHACTR3Q96KR7 559 aa16.62■□□□□ 0.25
SPINK4-201ENST00000379721 FHDC1Q9C0D6 1143 aaPredicted RBP16.62■□□□□ 0.25
SPINK4-201ENST00000379721 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
SPINK4-201ENST00000379721 SIPA1L3O60292 1781 aaPredicted RBP16.61■□□□□ 0.25
SPINK4-201ENST00000379721 FCHSD2O94868 740 aa16.61■□□□□ 0.25
SPINK4-201ENST00000379721 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
SPINK4-201ENST00000379721 UBR2Q8IWV8 1755 aa16.6■□□□□ 0.25
SPINK4-201ENST00000379721 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
SPINK4-201ENST00000379721 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
SPINK4-201ENST00000379721 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
SPINK4-201ENST00000379721 RC3H1Q5TC82 1133 aaKnown RBP16.59■□□□□ 0.25
SPINK4-201ENST00000379721 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
SPINK4-201ENST00000379721 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
SPINK4-201ENST00000379721 KCPQ6ZWJ8 1503 aa16.59■□□□□ 0.25
SPINK4-201ENST00000379721 TEFQ10587 303 aa16.58■□□□□ 0.24
SPINK4-201ENST00000379721 RTCBQ9Y3I0 505 aaKnown RBP16.58■□□□□ 0.24
SPINK4-201ENST00000379721 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
SPINK4-201ENST00000379721 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
SPINK4-201ENST00000379721 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
SPINK4-201ENST00000379721 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
SPINK4-201ENST00000379721 CRKLP46109 303 aaKnown RBP16.56■□□□□ 0.24
SPINK4-201ENST00000379721 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
SPINK4-201ENST00000379721 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
SPINK4-201ENST00000379721 RPS6KA4O75676 772 aa16.55■□□□□ 0.24
SPINK4-201ENST00000379721 ADRA2BP18089 450 aa16.55■□□□□ 0.24
SPINK4-201ENST00000379721 TRAPPC3LQ5T215 181 aa16.55■□□□□ 0.24
SPINK4-201ENST00000379721 DNAJC10Q8IXB1 793 aa16.55■□□□□ 0.24
SPINK4-201ENST00000379721 NEFMP07197 916 aa16.54■□□□□ 0.24
SPINK4-201ENST00000379721 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
SPINK4-201ENST00000379721 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
SPINK4-201ENST00000379721 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
SPINK4-201ENST00000379721 ARHGEF1Q92888 912 aaKnown RBP16.53■□□□□ 0.24
SPINK4-201ENST00000379721 INTS5Q6P9B9 1019 aaKnown RBP16.52■□□□□ 0.24
SPINK4-201ENST00000379721 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
SPINK4-201ENST00000379721 MCM10Q7L590 875 aa16.52■□□□□ 0.24
SPINK4-201ENST00000379721 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
SPINK4-201ENST00000379721 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
SPINK4-201ENST00000379721 HTATSF1O43719 755 aaKnown RBP16.51■□□□□ 0.23
SPINK4-201ENST00000379721 CYP19A1P11511 503 aaPredicted RBP16.51■□□□□ 0.23
SPINK4-201ENST00000379721 RFC4P35249 363 aa16.51■□□□□ 0.23
SPINK4-201ENST00000379721 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
SPINK4-201ENST00000379721 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
SPINK4-201ENST00000379721 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
SPINK4-201ENST00000379721 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
SPINK4-201ENST00000379721 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
SPINK4-201ENST00000379721 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
SPINK4-201ENST00000379721 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
SPINK4-201ENST00000379721 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
SPINK4-201ENST00000379721 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
SPINK4-201ENST00000379721 MMP10P09238 476 aa16.48■□□□□ 0.23
SPINK4-201ENST00000379721 GYS1P13807 737 aa16.48■□□□□ 0.23
SPINK4-201ENST00000379721 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
SPINK4-201ENST00000379721 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
SPINK4-201ENST00000379721 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
SPINK4-201ENST00000379721 CD2APQ9Y5K6 639 aa16.48■□□□□ 0.23
SPINK4-201ENST00000379721 KCNQ3O43525 872 aa16.47■□□□□ 0.23
SPINK4-201ENST00000379721 STARD3NLO95772 234 aa16.47■□□□□ 0.23
SPINK4-201ENST00000379721 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
SPINK4-201ENST00000379721 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
SPINK4-201ENST00000379721 TEX13AQ9BXU3 409 aaPredicted RBP16.46■□□□□ 0.23
SPINK4-201ENST00000379721 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms