RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 NFATC2IPQ8NCF5 419 aa31.97■■■□□ 2.71
TM6SF1-204ENST00000379390 KCNQ2O43526 872 aa31.96■■■□□ 2.71
TM6SF1-204ENST00000379390 TMOD3Q9NYL9 352 aa31.95■■■□□ 2.71
TM6SF1-204ENST00000379390 PAPPAQ13219 1627 aa31.94■■■□□ 2.7
TM6SF1-204ENST00000379390 LAS1LQ9Y4W2 734 aaKnown RBP31.94■■■□□ 2.7
TM6SF1-204ENST00000379390 WDR63Q8IWG1 891 aa31.93■■■□□ 2.7
TM6SF1-204ENST00000379390 CALD1Q05682 793 aaKnown RBP31.93■■■□□ 2.7
TM6SF1-204ENST00000379390 PTF1AQ7RTS3 328 aa31.93■■■□□ 2.7
TM6SF1-204ENST00000379390 PIGBQ92521 554 aa31.91■■■□□ 2.7
TM6SF1-204ENST00000379390 MIS18AQ9NYP9 233 aa31.91■■■□□ 2.7
TM6SF1-204ENST00000379390 TAF7Q15545 349 aaPredicted RBP31.9■■■□□ 2.7
TM6SF1-204ENST00000379390 SPINK5Q9NQ38 1064 aaPredicted RBP31.9■■■□□ 2.7
TM6SF1-204ENST00000379390 TNS1Q9HBL0 1735 aaKnown RBP31.9■■■□□ 2.7
TM6SF1-204ENST00000379390 GOLGA2Q08379 1002 aa31.89■■■□□ 2.7
TM6SF1-204ENST00000379390 UBR2Q8IWV8 1755 aa31.89■■■□□ 2.7
TM6SF1-204ENST00000379390 CDCA7LQ96GN5 454 aa31.89■■■□□ 2.7
TM6SF1-204ENST00000379390 IL16Q14005 1332 aa31.88■■■□□ 2.69
TM6SF1-204ENST00000379390 TRIM37O94972 964 aa31.88■■■□□ 2.69
TM6SF1-204ENST00000379390 BTBD11A6QL63 1104 aa31.87■■■□□ 2.69
TM6SF1-204ENST00000379390 CFAP44Q96MT7 982 aa31.87■■■□□ 2.69
TM6SF1-204ENST00000379390 IFT57Q9NWB7 429 aa31.87■■■□□ 2.69
TM6SF1-204ENST00000379390 GNAI1P63096 354 aa31.86■■■□□ 2.69
TM6SF1-204ENST00000379390 SLC39A6Q13433 755 aa31.86■■■□□ 2.69
TM6SF1-204ENST00000379390 TSPYL4Q9UJ04 414 aa31.86■■■□□ 2.69
TM6SF1-204ENST00000379390 ZNF853P0CG23 659 aa31.85■■■□□ 2.69
TM6SF1-204ENST00000379390 TSR2Q969E8 191 aaKnown RBP31.85■■■□□ 2.69
TM6SF1-204ENST00000379390 CHL1O00533 1208 aa31.84■■■□□ 2.69
TM6SF1-204ENST00000379390 MBIPQ9NS73 344 aa31.84■■■□□ 2.69
TM6SF1-204ENST00000379390 ASAP1Q9ULH1 1129 aa31.83■■■□□ 2.69
TM6SF1-204ENST00000379390 KCNQ3O43525 872 aa31.82■■■□□ 2.69
TM6SF1-204ENST00000379390 BCL11BQ9C0K0 894 aaPredicted RBP31.82■■■□□ 2.69
TM6SF1-204ENST00000379390 FANCIQ9NVI1 1328 aa31.81■■■□□ 2.68
TM6SF1-204ENST00000379390 E9PSI1 815 aa31.8■■■□□ 2.68
TM6SF1-204ENST00000379390 SLFN5Q08AF3 891 aa31.8■■■□□ 2.68
TM6SF1-204ENST00000379390 ZNF790Q6PG37 636 aa31.8■■■□□ 2.68
TM6SF1-204ENST00000379390 ATG3Q9NT62 314 aa31.8■■■□□ 2.68
TM6SF1-204ENST00000379390 KCPQ6ZWJ8 1503 aa31.8■■■□□ 2.68
TM6SF1-204ENST00000379390 LY75O60449 1722 aa31.79■■■□□ 2.68
TM6SF1-204ENST00000379390 MYH16Q9H6N6 1097 aa31.78■■■□□ 2.68
TM6SF1-204ENST00000379390 BABAM1Q9NWV8 329 aa31.78■■■□□ 2.68
TM6SF1-204ENST00000379390 TTC5Q8N0Z6 440 aa31.78■■■□□ 2.68
TM6SF1-204ENST00000379390 C5P01031 1676 aa31.77■■■□□ 2.68
TM6SF1-204ENST00000379390 ILDR2Q71H61 639 aa31.76■■■□□ 2.67
TM6SF1-204ENST00000379390 PALLDQ8WX93 1383 aa31.76■■■□□ 2.67
TM6SF1-204ENST00000379390 PTCD1O75127 700 aaKnown RBP31.75■■■□□ 2.67
TM6SF1-204ENST00000379390 KRT24Q2M2I5 525 aa31.73■■■□□ 2.67
TM6SF1-204ENST00000379390 DUSP27Q5VZP5 1158 aa31.73■■■□□ 2.67
TM6SF1-204ENST00000379390 TRMT2AQ8IZ69 625 aaKnown RBP31.73■■■□□ 2.67
TM6SF1-204ENST00000379390 ZNF496Q96IT1 587 aaPredicted RBP31.73■■■□□ 2.67
TM6SF1-204ENST00000379390 EIF4A1P60842 406 aaKnown RBP31.71■■■□□ 2.67
TM6SF1-204ENST00000379390 TJP1Q07157 1748 aa31.71■■■□□ 2.67
TM6SF1-204ENST00000379390 LAMB4A4D0S4 1761 aa31.71■■■□□ 2.67
TM6SF1-204ENST00000379390 SMARCC1Q92922 1105 aaPredicted RBP31.71■■■□□ 2.67
TM6SF1-204ENST00000379390 RBM42Q9BTD8 480 aaKnown RBP31.71■■■□□ 2.67
TM6SF1-204ENST00000379390 RGPD3A6NKT7 1758 aaPredicted RBP31.7■■■□□ 2.67
TM6SF1-204ENST00000379390 RGPD4Q7Z3J3 1758 aa31.7■■■□□ 2.67
TM6SF1-204ENST00000379390 APBA3O96018 575 aa31.69■■■□□ 2.66
TM6SF1-204ENST00000379390 EXOSC9Q06265 439 aaKnown RBP31.68■■■□□ 2.66
TM6SF1-204ENST00000379390 FMNL2Q96PY5 1086 aa31.68■■■□□ 2.66
TM6SF1-204ENST00000379390 TAF1LQ8IZX4 1826 aa31.68■■■□□ 2.66
TM6SF1-204ENST00000379390 ZNF831Q5JPB2 1677 aa31.68■■■□□ 2.66
TM6SF1-204ENST00000379390 HEG1Q9ULI3 1381 aa31.67■■■□□ 2.66
TM6SF1-204ENST00000379390 C8orf58Q8NAV2 365 aa31.67■■■□□ 2.66
TM6SF1-204ENST00000379390 CICQ96RK0 1608 aaPredicted RBP31.66■■■□□ 2.66
TM6SF1-204ENST00000379390 ELL2O00472 640 aaPredicted RBP31.66■■■□□ 2.66
TM6SF1-204ENST00000379390 TSPYL6Q8N831 410 aa31.65■■■□□ 2.66
TM6SF1-204ENST00000379390 SLC4A9Q96Q91 983 aa31.65■■■□□ 2.66
TM6SF1-204ENST00000379390 COL5A3P25940 1745 aaPredicted RBP31.65■■■□□ 2.66
TM6SF1-204ENST00000379390 LOC102724428A0A0B4J2F2 783 aa31.64■■■□□ 2.66
TM6SF1-204ENST00000379390 PRAMEF22A3QJZ6 481 aa31.64■■■□□ 2.66
TM6SF1-204ENST00000379390 SIK1P57059 783 aa31.64■■■□□ 2.66
TM6SF1-204ENST00000379390 KCNQ4P56696 695 aa31.63■■■□□ 2.65
TM6SF1-204ENST00000379390 SF3B2Q13435 895 aaKnown RBP31.63■■■□□ 2.65
TM6SF1-204ENST00000379390 GIGYF1O75420 1035 aaPredicted RBP31.61■■■□□ 2.65
TM6SF1-204ENST00000379390 SNRPA1P09661 255 aaKnown RBP31.6■■■□□ 2.65
TM6SF1-204ENST00000379390 ATP6V1AP38606 617 aa31.6■■■□□ 2.65
TM6SF1-204ENST00000379390 TWISTNBQ3B726 338 aaPredicted RBP31.6■■■□□ 2.65
TM6SF1-204ENST00000379390 PLSCR1O15162 318 aa31.59■■■□□ 2.65
TM6SF1-204ENST00000379390 CCNL1Q9UK58 526 aaPredicted RBP31.59■■■□□ 2.65
TM6SF1-204ENST00000379390 DNAJC10Q8IXB1 793 aa31.58■■■□□ 2.65
TM6SF1-204ENST00000379390 VSIG10Q8N0Z9 540 aa31.58■■■□□ 2.65
TM6SF1-204ENST00000379390 MYH14Q7Z406 1995 aaKnown RBP31.58■■■□□ 2.65
TM6SF1-204ENST00000379390 ITPK1Q13572 414 aa31.57■■■□□ 2.64
TM6SF1-204ENST00000379390 RREB1Q92766 1687 aa31.57■■■□□ 2.64
TM6SF1-204ENST00000379390 EN1Q05925 392 aaPredicted RBP31.57■■■□□ 2.64
TM6SF1-204ENST00000379390 BAG6P46379 1132 aa31.56■■■□□ 2.64
TM6SF1-204ENST00000379390 DEFB132Q7Z7B7 95 aa31.56■■■□□ 2.64
TM6SF1-204ENST00000379390 UPF1Q92900 1129 aaKnown RBP eCLIP31.56■■■□□ 2.64
TM6SF1-204ENST00000379390 TXNRD1Q16881 649 aa31.55■■■□□ 2.64
TM6SF1-204ENST00000379390 CCDC125Q86Z20 511 aa31.55■■■□□ 2.64
TM6SF1-204ENST00000379390 NECTIN2Q92692 538 aa31.55■■■□□ 2.64
TM6SF1-204ENST00000379390 USP16Q9Y5T5 823 aa31.55■■■□□ 2.64
TM6SF1-204ENST00000379390 PROM2Q8N271 834 aa31.54■■■□□ 2.64
TM6SF1-204ENST00000379390 LRRC4BQ9NT99 713 aa31.54■■■□□ 2.64
TM6SF1-204ENST00000379390 VAMP4O75379 141 aa31.53■■■□□ 2.64
TM6SF1-204ENST00000379390 HOXB7P09629 217 aa31.53■■■□□ 2.64
TM6SF1-204ENST00000379390 EIF2S2P20042 333 aaKnown RBP31.53■■■□□ 2.64
TM6SF1-204ENST00000379390 CACNA1FO60840 1977 aa31.53■■■□□ 2.64
TM6SF1-204ENST00000379390 C4BP0C0L5 1744 aa31.53■■■□□ 2.64
TM6SF1-204ENST00000379390 NUP188Q5SRE5 1749 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms