RNA–Protein interactions for RNA: ENST00000379348.2

PHACTR1-204, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 1 (best) BASIC

Gene PHACTR1, Length 795 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-204ENST00000379348 IGSF1Q8N6C5 1336 aa11.33□□□□□ -0.6
PHACTR1-204ENST00000379348 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
PHACTR1-204ENST00000379348 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
PHACTR1-204ENST00000379348 ITPK1Q13572 414 aa11.32□□□□□ -0.6
PHACTR1-204ENST00000379348 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
PHACTR1-204ENST00000379348 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
PHACTR1-204ENST00000379348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
PHACTR1-204ENST00000379348 GRIN3BO60391 1043 aa11.31□□□□□ -0.6
PHACTR1-204ENST00000379348 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
PHACTR1-204ENST00000379348 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
PHACTR1-204ENST00000379348 NCAPD2Q15021 1401 aa11.31□□□□□ -0.6
PHACTR1-204ENST00000379348 VIRMAQ69YN4 1812 aaKnown RBP11.3□□□□□ -0.6
PHACTR1-204ENST00000379348 FLT4P35916 1363 aa11.3□□□□□ -0.6
PHACTR1-204ENST00000379348 SMG6Q86US8 1419 aaKnown RBP11.3□□□□□ -0.6
PHACTR1-204ENST00000379348 CICQ96RK0 1608 aaPredicted RBP11.3□□□□□ -0.6
PHACTR1-204ENST00000379348 NSD3Q9BZ95 1437 aa11.29□□□□□ -0.6
PHACTR1-204ENST00000379348 AK7Q96M32 723 aa11.29□□□□□ -0.6
PHACTR1-204ENST00000379348 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
PHACTR1-204ENST00000379348 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
PHACTR1-204ENST00000379348 CGNL1Q0VF96 1302 aa11.29□□□□□ -0.6
PHACTR1-204ENST00000379348 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
PHACTR1-204ENST00000379348 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
PHACTR1-204ENST00000379348 KIF3CO14782 793 aa11.28□□□□□ -0.6
PHACTR1-204ENST00000379348 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
PHACTR1-204ENST00000379348 SIK1P57059 783 aa11.28□□□□□ -0.6
PHACTR1-204ENST00000379348 SBF1O95248 1867 aa11.27□□□□□ -0.6
PHACTR1-204ENST00000379348 HSPA6P17066 643 aa11.27□□□□□ -0.61
PHACTR1-204ENST00000379348 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
PHACTR1-204ENST00000379348 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
PHACTR1-204ENST00000379348 EYA1Q99502 592 aa11.27□□□□□ -0.61
PHACTR1-204ENST00000379348 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
PHACTR1-204ENST00000379348 GNPATO15228 680 aa11.26□□□□□ -0.61
PHACTR1-204ENST00000379348 ATG3Q9NT62 314 aa11.26□□□□□ -0.61
PHACTR1-204ENST00000379348 TJP1Q07157 1748 aa11.26□□□□□ -0.61
PHACTR1-204ENST00000379348 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 ADAMTS7Q9UKP4 1686 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 A0A0G2JLW4 131 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 TMF1P82094 1093 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 WDR90Q96KV7 1748 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 KDRP35968 1356 aa11.25□□□□□ -0.61
PHACTR1-204ENST00000379348 MMP10P09238 476 aa11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 PHKG2P15735 406 aa11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 SSFA2P28290 1259 aa11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
PHACTR1-204ENST00000379348 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 HTRA3P83110 453 aa11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
PHACTR1-204ENST00000379348 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
PHACTR1-204ENST00000379348 C10orf71Q711Q0 1435 aa11.22□□□□□ -0.61
PHACTR1-204ENST00000379348 NMRK2Q9NPI5 230 aa11.22□□□□□ -0.61
PHACTR1-204ENST00000379348 SCN11AQ9UI33 1791 aa11.22□□□□□ -0.61
PHACTR1-204ENST00000379348 DPEP1P16444 411 aa11.21□□□□□ -0.61
PHACTR1-204ENST00000379348 SPG7Q9UQ90 795 aa11.21□□□□□ -0.61
PHACTR1-204ENST00000379348 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
PHACTR1-204ENST00000379348 GYS1P13807 737 aa11.2□□□□□ -0.62
PHACTR1-204ENST00000379348 KCNA3P22001 575 aa11.2□□□□□ -0.62
PHACTR1-204ENST00000379348 DNAJC5GQ8N7S2 189 aa11.2□□□□□ -0.62
PHACTR1-204ENST00000379348 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
PHACTR1-204ENST00000379348 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
PHACTR1-204ENST00000379348 AEBP1Q8IUX7 1158 aa11.19□□□□□ -0.62
PHACTR1-204ENST00000379348 IFNL2Q8IZJ0 200 aa11.19□□□□□ -0.62
PHACTR1-204ENST00000379348 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
PHACTR1-204ENST00000379348 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
PHACTR1-204ENST00000379348 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
PHACTR1-204ENST00000379348 KCPQ6ZWJ8 1503 aa11.18□□□□□ -0.62
PHACTR1-204ENST00000379348 DDR1Q08345 913 aa11.17□□□□□ -0.62
PHACTR1-204ENST00000379348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.62
PHACTR1-204ENST00000379348 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
PHACTR1-204ENST00000379348 CACNA1SQ13698 1873 aa11.17□□□□□ -0.62
PHACTR1-204ENST00000379348 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
PHACTR1-204ENST00000379348 PTCD1O75127 700 aaKnown RBP11.16□□□□□ -0.62
PHACTR1-204ENST00000379348 FCHSD2O94868 740 aa11.16□□□□□ -0.62
PHACTR1-204ENST00000379348 CHRNA5P30532 468 aa11.16□□□□□ -0.62
PHACTR1-204ENST00000379348 FKBP8Q14318 412 aa11.16□□□□□ -0.62
PHACTR1-204ENST00000379348 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 PCNTO95613 3336 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 RPS6KA4O75676 772 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 PRELPP51888 382 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 TGFB2P61812 414 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 EVX2Q03828 476 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 C9orf131Q5VYM1 1079 aa11.15□□□□□ -0.62
PHACTR1-204ENST00000379348 NRXN2Q9P2S2 1712 aa11.15□□□□□ -0.63
PHACTR1-204ENST00000379348 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
PHACTR1-204ENST00000379348 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
PHACTR1-204ENST00000379348 TOMM70O94826 608 aa11.14□□□□□ -0.63
PHACTR1-204ENST00000379348 CRKLP46109 303 aaKnown RBP11.14□□□□□ -0.63
PHACTR1-204ENST00000379348 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
PHACTR1-204ENST00000379348 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
PHACTR1-204ENST00000379348 RFC4P35249 363 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms