RNA–Protein interactions for RNA: ENST00000379145.5

PCYT1B-203, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 1 (best) BASIC

Gene PCYT1B, Length 5,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-203ENST00000379145 SOX12O15370 315 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 SPTLC3Q9NUV7 552 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 WDR7Q9Y4E6 1490 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 SNW1Q13573 536 aaKnown RBP11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 CTNNA3Q9UI47 895 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 DDX41Q9UJV9 622 aaKnown RBP11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 LRRFIP2Q9Y608 721 aaKnown RBP11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 F13A1P00488 732 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 GJB2P29033 226 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 IL16Q14005 1332 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 RTEL1-TNFRSF6BF6WH68 1400 aa11.19□□□□□ -0.62
PCYT1B-203ENST00000379145 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 ERO1AQ96HE7 468 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 ZNF215Q9UL58 517 aaPredicted RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 RUFY2Q8WXA3 655 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 ESYT1Q9BSJ8 1104 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 NAT10Q9H0A0 1025 aaKnown RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 LIMCH1Q9UPQ0 1083 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 NEMFO60524 1076 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 URI1O94763 535 aaPredicted RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 CYP2E1P05181 493 aaPredicted RBP11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
PCYT1B-203ENST00000379145 DTNBO60941 627 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 ANKRD7Q92527 254 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 PDCP20941 246 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 JAKMIP1Q96N16 626 aaKnown RBP11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 WDR62O43379 1518 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 ADGRL2O95490 1459 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 ARHGAP29Q52LW3 1261 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 SDF4Q9BRK5 362 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 ATAD2Q6PL18 1390 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 TSPYL6Q8N831 410 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 ARHGAP45Q92619 1136 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
PCYT1B-203ENST00000379145 STK3Q13188 491 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 IL1RAPL2Q9NP60 686 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 DACT1Q9NYF0 836 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 NUP153P49790 1475 aaKnown RBP11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 GNAI2P04899 355 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 PDE1AP54750 535 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 FCHSD2O94868 740 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 SYT1P21579 422 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 CWC27Q6UX04 472 aaKnown RBP11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 NRBP1Q9UHY1 535 aa11.16□□□□□ -0.62
PCYT1B-203ENST00000379145 HNRNPH2P55795 449 aaKnown RBP11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 NFE2L2Q16236 605 aa11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 CCDC34Q96HJ3 373 aa11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 ADGRF5Q8IZF2 1346 aa11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 GPATCH3Q96I76 525 aa11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 CLASP1Q7Z460 1538 aa11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 DDX19AQ9NUU7 478 aaKnown RBP11.15□□□□□ -0.62
PCYT1B-203ENST00000379145 CCDC69A6NI79 296 aa11.15□□□□□ -0.63
PCYT1B-203ENST00000379145 CCP110O43303 1012 aa11.15□□□□□ -0.63
PCYT1B-203ENST00000379145 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.63
PCYT1B-203ENST00000379145 ZNF75DP51815 510 aa11.15□□□□□ -0.63
PCYT1B-203ENST00000379145 ANAPC15P60006 121 aa11.15□□□□□ -0.63
PCYT1B-203ENST00000379145 GGT6Q6P531 493 aa11.15□□□□□ -0.63
PCYT1B-203ENST00000379145 VAMP4O75379 141 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 SFPQP23246 707 aaKnown RBP eCLIP11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 SLFN14P0C7P3 912 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 DCTN1Q14203 1278 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 SYCP1Q15431 976 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 SYT10Q6XYQ8 523 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 PDILTQ8N807 584 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 CBX8Q9HC52 389 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 ZSCAN31Q96LW9 406 aaPredicted RBP11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 MORC2Q9Y6X9 1032 aaPredicted RBP11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 CEP57L1Q8IYX8 460 aa11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 SCAND2PQ9GZW5 306 aaPredicted RBP11.14□□□□□ -0.63
PCYT1B-203ENST00000379145 TPM1P09493 284 aa11.13□□□□□ -0.63
PCYT1B-203ENST00000379145 SYTL4Q96C24 671 aaPredicted RBP11.13□□□□□ -0.63
PCYT1B-203ENST00000379145 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
PCYT1B-203ENST00000379145 CREBRFQ8IUR6 639 aa11.13□□□□□ -0.63
PCYT1B-203ENST00000379145 MEIS3Q99687 375 aa11.13□□□□□ -0.63
PCYT1B-203ENST00000379145 PALD1Q9ULE6 856 aa11.13□□□□□ -0.63
PCYT1B-203ENST00000379145 ERCC6LQ2NKX8 1250 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms