RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
UPK1A-202ENST00000379013 HMOX1P09601 288 aa18.29■□□□□ 0.52
UPK1A-202ENST00000379013 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
UPK1A-202ENST00000379013 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
UPK1A-202ENST00000379013 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
UPK1A-202ENST00000379013 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
UPK1A-202ENST00000379013 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
UPK1A-202ENST00000379013 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
UPK1A-202ENST00000379013 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
UPK1A-202ENST00000379013 ITPK1Q13572 414 aa18.27■□□□□ 0.52
UPK1A-202ENST00000379013 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
UPK1A-202ENST00000379013 ITGB4P16144 1822 aa18.27■□□□□ 0.52
UPK1A-202ENST00000379013 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
UPK1A-202ENST00000379013 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
UPK1A-202ENST00000379013 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
UPK1A-202ENST00000379013 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
UPK1A-202ENST00000379013 ZNF530Q6P9A1 599 aaPredicted RBP18.25■□□□□ 0.51
UPK1A-202ENST00000379013 ARXQ96QS3 562 aa18.25■□□□□ 0.51
UPK1A-202ENST00000379013 TMOD3Q9NYL9 352 aa18.25■□□□□ 0.51
UPK1A-202ENST00000379013 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
UPK1A-202ENST00000379013 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
UPK1A-202ENST00000379013 LOC102724428A0A0B4J2F2 783 aa18.24■□□□□ 0.51
UPK1A-202ENST00000379013 SIK1P57059 783 aa18.24■□□□□ 0.51
UPK1A-202ENST00000379013 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
UPK1A-202ENST00000379013 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
UPK1A-202ENST00000379013 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
UPK1A-202ENST00000379013 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
UPK1A-202ENST00000379013 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
UPK1A-202ENST00000379013 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
UPK1A-202ENST00000379013 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
UPK1A-202ENST00000379013 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
UPK1A-202ENST00000379013 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
UPK1A-202ENST00000379013 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
UPK1A-202ENST00000379013 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
UPK1A-202ENST00000379013 MSH5O43196 834 aa18.2■□□□□ 0.5
UPK1A-202ENST00000379013 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
UPK1A-202ENST00000379013 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
UPK1A-202ENST00000379013 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
UPK1A-202ENST00000379013 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
UPK1A-202ENST00000379013 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
UPK1A-202ENST00000379013 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
UPK1A-202ENST00000379013 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
UPK1A-202ENST00000379013 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
UPK1A-202ENST00000379013 CABP4P57796 275 aa18.17■□□□□ 0.5
UPK1A-202ENST00000379013 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
UPK1A-202ENST00000379013 NLGN2Q8NFZ4 835 aa18.17■□□□□ 0.5
UPK1A-202ENST00000379013 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
UPK1A-202ENST00000379013 SCN11AQ9UI33 1791 aa18.17■□□□□ 0.5
UPK1A-202ENST00000379013 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
UPK1A-202ENST00000379013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
UPK1A-202ENST00000379013 APAF1O14727 1248 aa18.16■□□□□ 0.5
UPK1A-202ENST00000379013 HTATSF1O43719 755 aaKnown RBP18.16■□□□□ 0.5
UPK1A-202ENST00000379013 PHF14O94880 888 aa18.16■□□□□ 0.5
UPK1A-202ENST00000379013 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
UPK1A-202ENST00000379013 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
UPK1A-202ENST00000379013 AKAP4Q5JQC9 854 aa18.16■□□□□ 0.5
UPK1A-202ENST00000379013 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
UPK1A-202ENST00000379013 C5P01031 1676 aa18.15■□□□□ 0.5
UPK1A-202ENST00000379013 COL24A1Q17RW2 1714 aa18.15■□□□□ 0.5
UPK1A-202ENST00000379013 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
UPK1A-202ENST00000379013 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
UPK1A-202ENST00000379013 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
UPK1A-202ENST00000379013 AK7Q96M32 723 aa18.15■□□□□ 0.5
UPK1A-202ENST00000379013 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
UPK1A-202ENST00000379013 RIPK4P57078 832 aa18.14■□□□□ 0.49
UPK1A-202ENST00000379013 C4BP0C0L5 1744 aa18.14■□□□□ 0.49
UPK1A-202ENST00000379013 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
UPK1A-202ENST00000379013 POLD1P28340 1107 aa18.13■□□□□ 0.49
UPK1A-202ENST00000379013 ADAMTS7Q9UKP4 1686 aa18.12■□□□□ 0.49
UPK1A-202ENST00000379013 GNPATO15228 680 aa18.12■□□□□ 0.49
UPK1A-202ENST00000379013 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
UPK1A-202ENST00000379013 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
UPK1A-202ENST00000379013 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
UPK1A-202ENST00000379013 FLAD1Q8NFF5 587 aa18.11■□□□□ 0.49
UPK1A-202ENST00000379013 ZBED9Q6R2W3 1325 aa18.11■□□□□ 0.49
UPK1A-202ENST00000379013 UBR3Q6ZT12 1888 aa18.1■□□□□ 0.49
UPK1A-202ENST00000379013 SSFA2P28290 1259 aa18.1■□□□□ 0.49
UPK1A-202ENST00000379013 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
UPK1A-202ENST00000379013 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
UPK1A-202ENST00000379013 YY1P25490 414 aa18.09■□□□□ 0.49
UPK1A-202ENST00000379013 MYH14Q7Z406 1995 aaKnown RBP18.08■□□□□ 0.49
UPK1A-202ENST00000379013 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
UPK1A-202ENST00000379013 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.48
UPK1A-202ENST00000379013 RRP7AQ9Y3A4 280 aaKnown RBP18.08■□□□□ 0.48
UPK1A-202ENST00000379013 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
UPK1A-202ENST00000379013 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
UPK1A-202ENST00000379013 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
UPK1A-202ENST00000379013 IL16Q14005 1332 aa18.06■□□□□ 0.48
UPK1A-202ENST00000379013 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
UPK1A-202ENST00000379013 YBX3P16989 372 aaKnown RBP eCLIP18.06■□□□□ 0.48
UPK1A-202ENST00000379013 TEFQ10587 303 aa18.06■□□□□ 0.48
UPK1A-202ENST00000379013 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
UPK1A-202ENST00000379013 YTHDC1Q96MU7 727 aaKnown RBP18.06■□□□□ 0.48
UPK1A-202ENST00000379013 MRC1P22897 1456 aa18.06■□□□□ 0.48
UPK1A-202ENST00000379013 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
UPK1A-202ENST00000379013 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
UPK1A-202ENST00000379013 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
UPK1A-202ENST00000379013 RTCBQ9Y3I0 505 aaKnown RBP18.05■□□□□ 0.48
UPK1A-202ENST00000379013 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
UPK1A-202ENST00000379013 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms