RNA–Protein interactions for RNA: ENST00000378535.4

KITLG-204, Transcript of KIT ligand, humanhuman

TSL 1 (best)

Gene KITLG, Length 5,191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KITLG-204ENST00000378535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.42□□□□□ -1.86
KITLG-204ENST00000378535 GNAT3A8MTJ3 354 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 CNKSR1Q969H4 720 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 NYXQ9GZU5 481 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 PHRF1Q9P1Y6 1649 aaKnown RBP3.42□□□□□ -1.86
KITLG-204ENST00000378535 RPS6KA4O75676 772 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 LMOD1P29536 600 aaPredicted RBP3.42□□□□□ -1.86
KITLG-204ENST00000378535 ZNF622Q969S3 477 aaKnown RBP eCLIP3.42□□□□□ -1.86
KITLG-204ENST00000378535 SETDB2Q96T68 719 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 EMILIN1Q9Y6C2 1016 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 TRPM3Q9HCF6 1732 aaPredicted RBP3.42□□□□□ -1.86
KITLG-204ENST00000378535 PTCD1O75127 700 aaKnown RBP3.42□□□□□ -1.86
KITLG-204ENST00000378535 PHKG2P15735 406 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 LRP5O75197 1615 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 APLP1P51693 650 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 HSP90AB3PQ58FF7 597 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 KAT6BQ8WYB5 2073 aa3.42□□□□□ -1.86
KITLG-204ENST00000378535 SUPT20HQ8NEM7 779 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 JDP2Q8WYK2 163 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 EYA1Q99502 592 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 HTATSF1O43719 755 aaKnown RBP3.41□□□□□ -1.86
KITLG-204ENST00000378535 MMP10P09238 476 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 IGSF1Q8N6C5 1336 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 FAM208AQ9UK61 1670 aaKnown RBP3.41□□□□□ -1.86
KITLG-204ENST00000378535 THSD7AQ9UPZ6 1657 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 IQCA1LA6NCM1 817 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 ALDH1B1P30837 517 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 CC2D2BQ6DHV5 1058 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 TPTE2Q6XPS3 522 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 RPGRQ92834 1020 aaKnown RBP3.41□□□□□ -1.86
KITLG-204ENST00000378535 RGPD8O14715 1765 aaPredicted RBP3.41□□□□□ -1.86
KITLG-204ENST00000378535 BTBD11A6QL63 1104 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 EIF4A2Q14240 407 aaKnown RBP3.41□□□□□ -1.86
KITLG-204ENST00000378535 NKX1-1Q15270 411 aaPredicted RBP3.41□□□□□ -1.86
KITLG-204ENST00000378535 RALBP1Q15311 655 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 AKT1S1Q96B36 256 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 TESK2Q96S53 571 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 CLEC11AQ9Y240 323 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 CNTNAP4Q9C0A0 1308 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 TOPAZ1Q8N9V7 1692 aa3.41□□□□□ -1.86
KITLG-204ENST00000378535 EIF6P56537 245 aaKnown RBP3.4□□□□□ -1.86
KITLG-204ENST00000378535 BICDL1Q6ZP65 573 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 NBPF5PQ86XG9 351 aaPredicted RBP3.4□□□□□ -1.86
KITLG-204ENST00000378535 COL23A1Q86Y22 540 aaPredicted RBP3.4□□□□□ -1.86
KITLG-204ENST00000378535 VSIG10Q8N0Z9 540 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 TTLL6Q8N841 843 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 SMC1BQ8NDV3 1235 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 NRAPQ86VF7 1730 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 MYCNP04198 464 aaPredicted RBP3.4□□□□□ -1.86
KITLG-204ENST00000378535 CANXP27824 592 aaKnown RBP3.4□□□□□ -1.86
KITLG-204ENST00000378535 PPP1R42Q7Z4L9 355 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 C2CD5Q86YS7 1000 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 CNBD1Q8NA66 436 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 ZNF526Q8TF50 670 aaPredicted RBP3.4□□□□□ -1.86
KITLG-204ENST00000378535 POLKQ9UBT6 870 aa3.4□□□□□ -1.86
KITLG-204ENST00000378535 C1QTNF8P60827 252 aa3.4□□□□□ -1.87
KITLG-204ENST00000378535 PIGBQ92521 554 aa3.4□□□□□ -1.87
KITLG-204ENST00000378535 SLC52A2Q9HAB3 445 aa3.4□□□□□ -1.87
KITLG-204ENST00000378535 PARP4Q9UKK3 1724 aaKnown RBP3.4□□□□□ -1.87
KITLG-204ENST00000378535 PNPLA7Q6ZV29 1317 aa3.4□□□□□ -1.87
KITLG-204ENST00000378535 DDX58O95786 925 aaKnown RBP3.4□□□□□ -1.87
KITLG-204ENST00000378535 SNRPA1P09661 255 aaKnown RBP3.4□□□□□ -1.87
KITLG-204ENST00000378535 ANO8Q9HCE9 1232 aaPredicted RBP3.4□□□□□ -1.87
KITLG-204ENST00000378535 RNF181Q9P0P0 153 aa3.4□□□□□ -1.87
KITLG-204ENST00000378535 RNMTO43148 476 aaKnown RBP3.4□□□□□ -1.87
KITLG-204ENST00000378535 HMOX1P09601 288 aa3.4□□□□□ -1.87
KITLG-204ENST00000378535 PAXIP1Q6ZW49 1069 aaPredicted RBP3.4□□□□□ -1.87
KITLG-204ENST00000378535 ZC3H4Q9UPT8 1303 aaKnown RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 ABCA3Q99758 1704 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 WDHD1O75717 1129 aaPredicted RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 CRKLP46109 303 aaKnown RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 FSTL1Q12841 308 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 RTKN2Q8IZC4 609 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 ZNF784Q8NCA9 323 aaPredicted RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 NFATC2IPQ8NCF5 419 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 RBM17Q96I25 401 aaKnown RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 AKAP12Q02952 1782 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 ZNF827Q17R98 1081 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 HDAC5Q9UQL6 1122 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 LMNB1P20700 586 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 NCAPD2Q15021 1401 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 SERPINB2P05120 415 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 TAF7Q15545 349 aaPredicted RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 CCDC93Q567U6 631 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 SAMD1Q6SPF0 538 aaPredicted RBP3.39□□□□□ -1.87
KITLG-204ENST00000378535 STK31Q9BXU1 1019 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 NARFQ9UHQ1 456 aa3.39□□□□□ -1.87
KITLG-204ENST00000378535 CYP27B1O15528 508 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 TOMM70O94826 608 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 VEGFAP15692 232 aaPredicted RBP3.38□□□□□ -1.87
KITLG-204ENST00000378535 TMC4Q7Z404 712 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 DZIP3Q86Y13 1208 aaKnown RBP3.38□□□□□ -1.87
KITLG-204ENST00000378535 RBM46Q8TBY0 533 aaKnown RBP3.38□□□□□ -1.87
KITLG-204ENST00000378535 ATG3Q9NT62 314 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 ASAP1Q9ULH1 1129 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 ANP32CO43423 234 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 IL6STP40189 918 aaPredicted RBP3.38□□□□□ -1.87
KITLG-204ENST00000378535 NEXNQ0ZGT2 675 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 PARP10Q53GL7 1025 aa3.38□□□□□ -1.87
KITLG-204ENST00000378535 ARHGEF1Q92888 912 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms