RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SMIM5Q71RC9 77 aa20.71■□□□□ 0.91
RAB4B-202ENST00000378307 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
RAB4B-202ENST00000378307 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
RAB4B-202ENST00000378307 COL23A1Q86Y22 540 aaPredicted RBP20.7■□□□□ 0.9
RAB4B-202ENST00000378307 PPP1R1BQ9UD71 204 aaPredicted RBP20.7■□□□□ 0.9
RAB4B-202ENST00000378307 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
RAB4B-202ENST00000378307 ATP6V1AP38606 617 aa20.68■□□□□ 0.9
RAB4B-202ENST00000378307 COL24A1Q17RW2 1714 aa20.67■□□□□ 0.9
RAB4B-202ENST00000378307 UBR3Q6ZT12 1888 aa20.67■□□□□ 0.9
RAB4B-202ENST00000378307 RNMTO43148 476 aaKnown RBP20.67■□□□□ 0.9
RAB4B-202ENST00000378307 PHACTR3Q96KR7 559 aa20.67■□□□□ 0.9
RAB4B-202ENST00000378307 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
RAB4B-202ENST00000378307 SLC16A10Q8TF71 515 aa20.66■□□□□ 0.9
RAB4B-202ENST00000378307 RBM42Q9BTD8 480 aaKnown RBP20.66■□□□□ 0.9
RAB4B-202ENST00000378307 ADAMTS7Q9UKP4 1686 aa20.66■□□□□ 0.9
RAB4B-202ENST00000378307 SLC52A2Q9HAB3 445 aa20.65■□□□□ 0.9
RAB4B-202ENST00000378307 MSH5O43196 834 aa20.64■□□□□ 0.89
RAB4B-202ENST00000378307 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
RAB4B-202ENST00000378307 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
RAB4B-202ENST00000378307 U2AF1L5P0DN76 240 aaPredicted RBP20.63■□□□□ 0.89
RAB4B-202ENST00000378307 U2AF1Q01081 240 aaKnown RBP eCLIP20.63■□□□□ 0.89
RAB4B-202ENST00000378307 AK7Q96M32 723 aa20.63■□□□□ 0.89
RAB4B-202ENST00000378307 ZNF831Q5JPB2 1677 aa20.63■□□□□ 0.89
RAB4B-202ENST00000378307 MRC1P22897 1456 aa20.62■□□□□ 0.89
RAB4B-202ENST00000378307 COL5A3P25940 1745 aaPredicted RBP20.62■□□□□ 0.89
RAB4B-202ENST00000378307 FHDC1Q9C0D6 1143 aaPredicted RBP20.62■□□□□ 0.89
RAB4B-202ENST00000378307 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
RAB4B-202ENST00000378307 MYH14Q7Z406 1995 aaKnown RBP20.62■□□□□ 0.89
RAB4B-202ENST00000378307 PHF14O94880 888 aa20.61■□□□□ 0.89
RAB4B-202ENST00000378307 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
RAB4B-202ENST00000378307 MSL1Q68DK7 614 aa20.61■□□□□ 0.89
RAB4B-202ENST00000378307 IL17REQ8NFR9 667 aa20.61■□□□□ 0.89
RAB4B-202ENST00000378307 ARXQ96QS3 562 aa20.61■□□□□ 0.89
RAB4B-202ENST00000378307 UTRNP46939 3433 aa20.6■□□□□ 0.89
RAB4B-202ENST00000378307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.6■□□□□ 0.89
RAB4B-202ENST00000378307 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
RAB4B-202ENST00000378307 SYT17Q9BSW7 474 aa20.59■□□□□ 0.89
RAB4B-202ENST00000378307 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
RAB4B-202ENST00000378307 TJP1Q07157 1748 aa20.58■□□□□ 0.89
RAB4B-202ENST00000378307 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.89
RAB4B-202ENST00000378307 GNPATO15228 680 aa20.58■□□□□ 0.89
RAB4B-202ENST00000378307 FCHSD2O94868 740 aa20.58■□□□□ 0.89
RAB4B-202ENST00000378307 HMGB2P26583 209 aaKnown RBP20.58■□□□□ 0.89
RAB4B-202ENST00000378307 FLAD1Q8NFF5 587 aa20.58■□□□□ 0.89
RAB4B-202ENST00000378307 SSFA2P28290 1259 aa20.57■□□□□ 0.88
RAB4B-202ENST00000378307 SIPA1L3O60292 1781 aaPredicted RBP20.57■□□□□ 0.88
RAB4B-202ENST00000378307 POLD1P28340 1107 aa20.56■□□□□ 0.88
RAB4B-202ENST00000378307 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
RAB4B-202ENST00000378307 RALBP1Q15311 655 aa20.56■□□□□ 0.88
RAB4B-202ENST00000378307 KCPQ6ZWJ8 1503 aa20.55■□□□□ 0.88
RAB4B-202ENST00000378307 RC3H1Q5TC82 1133 aaKnown RBP20.55■□□□□ 0.88
RAB4B-202ENST00000378307 GOLGB1Q14789 3259 aaKnown RBP20.54■□□□□ 0.88
RAB4B-202ENST00000378307 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
RAB4B-202ENST00000378307 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
RAB4B-202ENST00000378307 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
RAB4B-202ENST00000378307 CEMIPQ8WUJ3 1361 aa20.53■□□□□ 0.88
RAB4B-202ENST00000378307 UBR2Q8IWV8 1755 aa20.53■□□□□ 0.88
RAB4B-202ENST00000378307 RPS6KA4O75676 772 aa20.52■□□□□ 0.88
RAB4B-202ENST00000378307 CRKLP46109 303 aaKnown RBP20.52■□□□□ 0.88
RAB4B-202ENST00000378307 ARHGEF1Q92888 912 aaKnown RBP20.52■□□□□ 0.88
RAB4B-202ENST00000378307 PLEKHF1Q96S99 279 aa20.52■□□□□ 0.88
RAB4B-202ENST00000378307 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
RAB4B-202ENST00000378307 DCTN1Q14203 1278 aa20.51■□□□□ 0.87
RAB4B-202ENST00000378307 INTS5Q6P9B9 1019 aaKnown RBP20.51■□□□□ 0.87
RAB4B-202ENST00000378307 MCM10Q7L590 875 aa20.51■□□□□ 0.87
RAB4B-202ENST00000378307 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
RAB4B-202ENST00000378307 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
RAB4B-202ENST00000378307 KCNQ3O43525 872 aa20.5■□□□□ 0.87
RAB4B-202ENST00000378307 TEFQ10587 303 aa20.5■□□□□ 0.87
RAB4B-202ENST00000378307 TRAPPC3LQ5T215 181 aa20.5■□□□□ 0.87
RAB4B-202ENST00000378307 NLGN2Q8NFZ4 835 aa20.49■□□□□ 0.87
RAB4B-202ENST00000378307 C4AP0C0L4 1744 aa20.49■□□□□ 0.87
RAB4B-202ENST00000378307 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
RAB4B-202ENST00000378307 CYP19A1P11511 503 aaPredicted RBP20.48■□□□□ 0.87
RAB4B-202ENST00000378307 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
RAB4B-202ENST00000378307 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
RAB4B-202ENST00000378307 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
RAB4B-202ENST00000378307 BTBD11A6QL63 1104 aa20.45■□□□□ 0.86
RAB4B-202ENST00000378307 ADRA2BP18089 450 aa20.45■□□□□ 0.86
RAB4B-202ENST00000378307 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
RAB4B-202ENST00000378307 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
RAB4B-202ENST00000378307 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
RAB4B-202ENST00000378307 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
RAB4B-202ENST00000378307 SRP68Q9UHB9 627 aaKnown RBP20.45■□□□□ 0.86
RAB4B-202ENST00000378307 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
RAB4B-202ENST00000378307 GYS1P13807 737 aa20.44■□□□□ 0.86
RAB4B-202ENST00000378307 RFC4P35249 363 aa20.44■□□□□ 0.86
RAB4B-202ENST00000378307 HEG1Q9ULI3 1381 aa20.44■□□□□ 0.86
RAB4B-202ENST00000378307 HTATSF1O43719 755 aaKnown RBP20.43■□□□□ 0.86
RAB4B-202ENST00000378307 MMP10P09238 476 aa20.42■□□□□ 0.86
RAB4B-202ENST00000378307 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
RAB4B-202ENST00000378307 SOS1Q07889 1333 aaPredicted RBP20.42■□□□□ 0.86
RAB4B-202ENST00000378307 THUMPD2Q9BTF0 503 aaKnown RBP20.41■□□□□ 0.86
RAB4B-202ENST00000378307 MIS18AQ9NYP9 233 aa20.41■□□□□ 0.86
RAB4B-202ENST00000378307 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
RAB4B-202ENST00000378307 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
RAB4B-202ENST00000378307 USP42Q9H9J4 1324 aaKnown RBP20.4■□□□□ 0.86
RAB4B-202ENST00000378307 CD2APQ9Y5K6 639 aa20.4■□□□□ 0.86
RAB4B-202ENST00000378307 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
RAB4B-202ENST00000378307 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms