RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 EXOC6BQ9Y2D4 811 aa23.9■■□□□ 1.42
PCDHA4-201ENST00000378125 RBM25P49756 843 aaKnown RBP23.89■■□□□ 1.42
PCDHA4-201ENST00000378125 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
PCDHA4-201ENST00000378125 CDC45O75419 566 aa23.89■■□□□ 1.41
PCDHA4-201ENST00000378125 TEFQ10587 303 aa23.89■■□□□ 1.41
PCDHA4-201ENST00000378125 HMMRO75330 724 aa23.88■■□□□ 1.41
PCDHA4-201ENST00000378125 ANXA1P04083 346 aa23.88■■□□□ 1.41
PCDHA4-201ENST00000378125 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
PCDHA4-201ENST00000378125 EIF4A1P60842 406 aaKnown RBP23.88■■□□□ 1.41
PCDHA4-201ENST00000378125 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
PCDHA4-201ENST00000378125 BTBD11A6QL63 1104 aa23.87■■□□□ 1.41
PCDHA4-201ENST00000378125 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
PCDHA4-201ENST00000378125 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
PCDHA4-201ENST00000378125 HSCBQ8IWL3 235 aa23.87■■□□□ 1.41
PCDHA4-201ENST00000378125 BABAM1Q9NWV8 329 aa23.87■■□□□ 1.41
PCDHA4-201ENST00000378125 PNMA6EA0A0J9YXQ4 647 aa23.86■■□□□ 1.41
PCDHA4-201ENST00000378125 CHPF2Q9P2E5 772 aa23.85■■□□□ 1.41
PCDHA4-201ENST00000378125 LRRFIP2Q9Y608 721 aaKnown RBP23.85■■□□□ 1.41
PCDHA4-201ENST00000378125 C1orf141Q5JVX7 400 aa23.85■■□□□ 1.41
PCDHA4-201ENST00000378125 RBM42Q9BTD8 480 aaKnown RBP23.85■■□□□ 1.41
PCDHA4-201ENST00000378125 PXDNQ92626 1479 aa23.85■■□□□ 1.41
PCDHA4-201ENST00000378125 TSHZ3Q63HK5 1081 aa23.84■■□□□ 1.41
PCDHA4-201ENST00000378125 KIF2CQ99661 725 aa23.84■■□□□ 1.41
PCDHA4-201ENST00000378125 GNAI3P08754 354 aa23.83■■□□□ 1.41
PCDHA4-201ENST00000378125 ATF3P18847 181 aa23.83■■□□□ 1.41
PCDHA4-201ENST00000378125 SDSP20132 328 aa23.83■■□□□ 1.41
PCDHA4-201ENST00000378125 SLIT3O75094 1523 aa23.82■■□□□ 1.4
PCDHA4-201ENST00000378125 RNMTO43148 476 aaKnown RBP23.82■■□□□ 1.4
PCDHA4-201ENST00000378125 GSE1Q14687 1217 aa23.82■■□□□ 1.4
PCDHA4-201ENST00000378125 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
PCDHA4-201ENST00000378125 USP44Q9H0E7 712 aa23.82■■□□□ 1.4
PCDHA4-201ENST00000378125 AMOTQ4VCS5 1084 aa23.81■■□□□ 1.4
PCDHA4-201ENST00000378125 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
PCDHA4-201ENST00000378125 TRPM3Q9HCF6 1732 aaPredicted RBP23.8■■□□□ 1.4
PCDHA4-201ENST00000378125 PRAMEF22A3QJZ6 481 aa23.8■■□□□ 1.4
PCDHA4-201ENST00000378125 CD2BP2O95400 341 aaKnown RBP23.8■■□□□ 1.4
PCDHA4-201ENST00000378125 HSPA2P54652 639 aa23.8■■□□□ 1.4
PCDHA4-201ENST00000378125 UBTFL1P0CB47 393 aaPredicted RBP23.79■■□□□ 1.4
PCDHA4-201ENST00000378125 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
PCDHA4-201ENST00000378125 ATP8B2P98198 1209 aa23.79■■□□□ 1.4
PCDHA4-201ENST00000378125 FOXD4L1Q9NU39 408 aa23.79■■□□□ 1.4
PCDHA4-201ENST00000378125 RGPD5Q99666 1765 aa23.79■■□□□ 1.4
PCDHA4-201ENST00000378125 PHRF1Q9P1Y6 1649 aaKnown RBP23.79■■□□□ 1.4
PCDHA4-201ENST00000378125 PI4KAP2A4QPH2 592 aa23.78■■□□□ 1.4
PCDHA4-201ENST00000378125 PI4KAP1Q8N8J0 262 aa23.78■■□□□ 1.4
PCDHA4-201ENST00000378125 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
PCDHA4-201ENST00000378125 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
PCDHA4-201ENST00000378125 PDE1AP54750 535 aa23.77■■□□□ 1.4
PCDHA4-201ENST00000378125 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.4
PCDHA4-201ENST00000378125 HSP90AB1P08238 724 aaKnown RBP23.76■■□□□ 1.39
PCDHA4-201ENST00000378125 LRRCC1Q9C099 1032 aa23.76■■□□□ 1.39
PCDHA4-201ENST00000378125 LMO7Q8WWI1 1683 aa23.76■■□□□ 1.39
PCDHA4-201ENST00000378125 ERBB3P21860 1342 aa23.76■■□□□ 1.39
PCDHA4-201ENST00000378125 NBPF7P0C2Y1 421 aaPredicted RBP23.75■■□□□ 1.39
PCDHA4-201ENST00000378125 CHRNA2Q15822 529 aa23.75■■□□□ 1.39
PCDHA4-201ENST00000378125 KDM3BQ7LBC6 1761 aa23.75■■□□□ 1.39
PCDHA4-201ENST00000378125 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
PCDHA4-201ENST00000378125 PROSER3Q2NL68 480 aa23.74■■□□□ 1.39
PCDHA4-201ENST00000378125 SNX21Q969T3 373 aa23.74■■□□□ 1.39
PCDHA4-201ENST00000378125 MST1RQ04912 1400 aa23.74■■□□□ 1.39
PCDHA4-201ENST00000378125 DNAAF4Q8WXU2 420 aa23.73■■□□□ 1.39
PCDHA4-201ENST00000378125 IL1RAPL2Q9NP60 686 aa23.73■■□□□ 1.39
PCDHA4-201ENST00000378125 CHMP5Q9NZZ3 219 aa23.73■■□□□ 1.39
PCDHA4-201ENST00000378125 CSB-PGBD3P0DP91 1061 aa23.72■■□□□ 1.39
PCDHA4-201ENST00000378125 KIF1AQ12756 1690 aa23.72■■□□□ 1.39
PCDHA4-201ENST00000378125 PPP1R42Q7Z4L9 355 aa23.72■■□□□ 1.39
PCDHA4-201ENST00000378125 USP26Q9BXU7 913 aa23.72■■□□□ 1.39
PCDHA4-201ENST00000378125 STRCP1A6NGW2 1772 aa23.72■■□□□ 1.39
PCDHA4-201ENST00000378125 GIGYF1O75420 1035 aaPredicted RBP23.71■■□□□ 1.39
PCDHA4-201ENST00000378125 HOXB7P09629 217 aa23.71■■□□□ 1.39
PCDHA4-201ENST00000378125 SLC39A6Q13433 755 aa23.71■■□□□ 1.39
PCDHA4-201ENST00000378125 BEND3Q5T5X7 828 aa23.71■■□□□ 1.39
PCDHA4-201ENST00000378125 CASC1Q6TDU7 716 aa23.71■■□□□ 1.39
PCDHA4-201ENST00000378125 RAPGEF4Q8WZA2 1011 aa23.71■■□□□ 1.39
PCDHA4-201ENST00000378125 NCAPD2Q15021 1401 aa23.7■■□□□ 1.39
PCDHA4-201ENST00000378125 PXDNLA1KZ92 1463 aa23.7■■□□□ 1.38
PCDHA4-201ENST00000378125 IBTKQ9P2D0 1353 aaPredicted RBP23.7■■□□□ 1.38
PCDHA4-201ENST00000378125 HSP90AA1P07900 732 aaKnown RBP23.7■■□□□ 1.38
PCDHA4-201ENST00000378125 MX1P20591 662 aa23.7■■□□□ 1.38
PCDHA4-201ENST00000378125 DBF4Q9UBU7 674 aaPredicted RBP23.7■■□□□ 1.38
PCDHA4-201ENST00000378125 ADCY9O60503 1353 aa23.69■■□□□ 1.38
PCDHA4-201ENST00000378125 SRGAP3O43295 1099 aa23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 SURF6O75683 361 aaKnown RBP23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 RILPL2Q969X0 211 aa23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 OSBPL3Q9H4L5 887 aa23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 ALS2Q96Q42 1657 aa23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 AIMP1Q12904 312 aaKnown RBP23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 NUTM1Q86Y26 1132 aa23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
PCDHA4-201ENST00000378125 TRIM6-TRIM34B2RNG4 842 aa23.67■■□□□ 1.38
PCDHA4-201ENST00000378125 SALL3Q9BXA9 1300 aa23.67■■□□□ 1.38
PCDHA4-201ENST00000378125 K7ELQ4 463 aaPredicted RBP23.66■■□□□ 1.38
PCDHA4-201ENST00000378125 SSH3Q8TE77 659 aa23.66■■□□□ 1.38
PCDHA4-201ENST00000378125 CWF19L2Q2TBE0 894 aaKnown RBP23.65■■□□□ 1.38
PCDHA4-201ENST00000378125 NFATC2IPQ8NCF5 419 aa23.65■■□□□ 1.38
PCDHA4-201ENST00000378125 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
PCDHA4-201ENST00000378125 CADPS2Q86UW7 1296 aa23.65■■□□□ 1.38
PCDHA4-201ENST00000378125 NCOA3Q9Y6Q9 1424 aa23.65■■□□□ 1.38
PCDHA4-201ENST00000378125 N4BP2Q86UW6 1770 aaPredicted RBP23.64■■□□□ 1.38
PCDHA4-201ENST00000378125 MCM4P33991 863 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms