RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MAP3K9P80192 1104 aa19.08■□□□□ 0.64
RGP1-201ENST00000378078 GRIPAP1Q4V328 841 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 ZNF397Q8NF99 534 aaPredicted RBP19.07■□□□□ 0.64
RGP1-201ENST00000378078 PDCP20941 246 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 CFAP100Q494V2 611 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 CACNA2D4Q7Z3S7 1137 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 FERMT3Q86UX7 667 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 KIF20AO95235 890 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 IMMTQ16891 758 aaKnown RBP19.07■□□□□ 0.64
RGP1-201ENST00000378078 CUL5Q93034 780 aa19.07■□□□□ 0.64
RGP1-201ENST00000378078 LARP1Q6PKG0 1096 aaKnown RBP19.07■□□□□ 0.64
RGP1-201ENST00000378078 ZNF444Q8N0Y2 327 aaPredicted RBP19.07■□□□□ 0.64
RGP1-201ENST00000378078 GOLGA6L7A0A1B0GV03 622 aa19.06■□□□□ 0.64
RGP1-201ENST00000378078 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
RGP1-201ENST00000378078 CCDC83Q8IWF9 413 aa19.06■□□□□ 0.64
RGP1-201ENST00000378078 RGS22Q8NE09 1264 aa19.06■□□□□ 0.64
RGP1-201ENST00000378078 LMAN1P49257 510 aa19.06■□□□□ 0.64
RGP1-201ENST00000378078 PRPF4BQ13523 1007 aaKnown RBP19.06■□□□□ 0.64
RGP1-201ENST00000378078 MCM10Q7L590 875 aa19.06■□□□□ 0.64
RGP1-201ENST00000378078 STARD3NLO95772 234 aa19.05■□□□□ 0.64
RGP1-201ENST00000378078 RBM25P49756 843 aaKnown RBP19.05■□□□□ 0.64
RGP1-201ENST00000378078 UPF3BQ9BZI7 483 aaKnown RBP19.05■□□□□ 0.64
RGP1-201ENST00000378078 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
RGP1-201ENST00000378078 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 RABEP1Q15276 862 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 CCT2P78371 535 aaKnown RBP19.04■□□□□ 0.64
RGP1-201ENST00000378078 BICD1Q96G01 975 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 KRT85P78386 507 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 PLS1Q14651 629 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
RGP1-201ENST00000378078 EXOC6BQ9Y2D4 811 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 CBFA2T2O43439 604 aa19.04■□□□□ 0.64
RGP1-201ENST00000378078 KAT6BQ8WYB5 2073 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 CDKL5O76039 1030 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 UQCRHLA0A096LP55 91 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 PPP1R12BO60237 982 aaPredicted RBP19.03■□□□□ 0.64
RGP1-201ENST00000378078 UQCRHP07919 91 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 MRE11P49959 708 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 TSG101Q99816 390 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 AEBP1Q8IUX7 1158 aa19.03■□□□□ 0.64
RGP1-201ENST00000378078 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
RGP1-201ENST00000378078 CCDC8Q9H0W5 538 aaPredicted RBP19.02■□□□□ 0.64
RGP1-201ENST00000378078 INCENPQ9NQS7 918 aa19.02■□□□□ 0.64
RGP1-201ENST00000378078 CASQ1P31415 396 aa19.02■□□□□ 0.64
RGP1-201ENST00000378078 CCT4P50991 539 aaKnown RBP19.02■□□□□ 0.64
RGP1-201ENST00000378078 APBB1IPQ7Z5R6 666 aaPredicted RBP19.02■□□□□ 0.64
RGP1-201ENST00000378078 PANK2Q9BZ23 570 aa19.02■□□□□ 0.64
RGP1-201ENST00000378078 IFFO1Q0D2I5 559 aa19.02■□□□□ 0.64
RGP1-201ENST00000378078 C16orf71Q8IYS4 520 aaPredicted RBP19.02■□□□□ 0.64
RGP1-201ENST00000378078 ZMYND15Q9H091 742 aa19.02■□□□□ 0.63
RGP1-201ENST00000378078 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.02■□□□□ 0.63
RGP1-201ENST00000378078 PPP2R1AP30153 589 aa19.02■□□□□ 0.63
RGP1-201ENST00000378078 AKNAD1Q5T1N1 836 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 CCDC148Q8NFR7 591 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 SPA17Q15506 151 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 NLRP5P59047 1200 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 TCERG1LQ5VWI1 586 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 CKAP2LQ8IYA6 745 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 SYCP3Q8IZU3 236 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 OTUD6BQ8N6M0 293 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 FAM212AQ96EL1 285 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 PRDM10Q9NQV6 1147 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 TDRD12Q587J7 1177 aaKnown RBP19.01■□□□□ 0.63
RGP1-201ENST00000378078 ACSBG1Q96GR2 724 aa19.01■□□□□ 0.63
RGP1-201ENST00000378078 PRKCSHP14314 528 aaPredicted RBP19■□□□□ 0.63
RGP1-201ENST00000378078 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
RGP1-201ENST00000378078 TRERF1Q96PN7 1200 aa19■□□□□ 0.63
RGP1-201ENST00000378078 NAPBQ9H115 298 aa19■□□□□ 0.63
RGP1-201ENST00000378078 PRC1O43663 620 aa19■□□□□ 0.63
RGP1-201ENST00000378078 STAMBPO95630 424 aa19■□□□□ 0.63
RGP1-201ENST00000378078 NUP62CLQ9H1M0 184 aa19■□□□□ 0.63
RGP1-201ENST00000378078 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
RGP1-201ENST00000378078 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
RGP1-201ENST00000378078 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
RGP1-201ENST00000378078 PABPN1LA6NDY0 278 aaKnown RBP19■□□□□ 0.63
RGP1-201ENST00000378078 ARHGAP29Q52LW3 1261 aa19■□□□□ 0.63
RGP1-201ENST00000378078 DNAI2Q9GZS0 605 aa19■□□□□ 0.63
RGP1-201ENST00000378078 DDX23Q9BUQ8 820 aaKnown RBP18.99■□□□□ 0.63
RGP1-201ENST00000378078 NUP88Q99567 741 aaPredicted RBP18.99■□□□□ 0.63
RGP1-201ENST00000378078 RNF187Q5TA31 235 aaPredicted RBP18.98■□□□□ 0.63
RGP1-201ENST00000378078 K7ELQ4 463 aaPredicted RBP18.98■□□□□ 0.63
RGP1-201ENST00000378078 IFIT1P09914 478 aaKnown RBP18.98■□□□□ 0.63
RGP1-201ENST00000378078 GJC1P36383 396 aa18.98■□□□□ 0.63
RGP1-201ENST00000378078 ATP2B3Q16720 1220 aa18.98■□□□□ 0.63
RGP1-201ENST00000378078 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
RGP1-201ENST00000378078 TXLNBQ8N3L3 684 aa18.98■□□□□ 0.63
RGP1-201ENST00000378078 GIMAP7Q8NHV1 300 aa18.98■□□□□ 0.63
RGP1-201ENST00000378078 CEP131Q9UPN4 1083 aa18.98■□□□□ 0.63
RGP1-201ENST00000378078 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
RGP1-201ENST00000378078 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
RGP1-201ENST00000378078 PROCA1Q8NCQ7 364 aaPredicted RBP18.97■□□□□ 0.63
RGP1-201ENST00000378078 TRMT1Q9NXH9 659 aaKnown RBP18.97■□□□□ 0.63
RGP1-201ENST00000378078 SYCE3A1L190 88 aa18.97■□□□□ 0.63
RGP1-201ENST00000378078 LUZP1Q86V48 1076 aa18.97■□□□□ 0.63
RGP1-201ENST00000378078 GNAT3A8MTJ3 354 aa18.97■□□□□ 0.63
RGP1-201ENST00000378078 BIN1O00499 593 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 FKBP15Q5T1M5 1219 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 IQCEQ6IPM2 695 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 EIF3JO75822 258 aaKnown RBP18.96■□□□□ 0.63
RGP1-201ENST00000378078 MBD3O95983 291 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms