RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 IDI1Q13907 227 aa19.14■□□□□ 0.65
CKAP4-201ENST00000378026 NME9Q86XW9 330 aa19.14■□□□□ 0.65
CKAP4-201ENST00000378026 MAP4K4O95819 1239 aaPredicted RBP19.14■□□□□ 0.65
CKAP4-201ENST00000378026 CHAF1AQ13111 956 aaPredicted RBP19.14■□□□□ 0.65
CKAP4-201ENST00000378026 INTS4Q96HW7 963 aaKnown RBP19.14■□□□□ 0.65
CKAP4-201ENST00000378026 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
CKAP4-201ENST00000378026 AP5Z1O43299 807 aa19.13■□□□□ 0.65
CKAP4-201ENST00000378026 MX1P20591 662 aa19.13■□□□□ 0.65
CKAP4-201ENST00000378026 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
CKAP4-201ENST00000378026 CHD1O14646 1710 aa19.13■□□□□ 0.65
CKAP4-201ENST00000378026 UNC5CLQ8IV45 518 aa19.13■□□□□ 0.65
CKAP4-201ENST00000378026 CHMLP26374 656 aa19.12■□□□□ 0.65
CKAP4-201ENST00000378026 AEBP1Q8IUX7 1158 aa19.12■□□□□ 0.65
CKAP4-201ENST00000378026 ARHGEF40Q8TER5 1519 aa19.12■□□□□ 0.65
CKAP4-201ENST00000378026 G2E3Q7L622 706 aa19.11■□□□□ 0.65
CKAP4-201ENST00000378026 IL25Q9H293 177 aa19.11■□□□□ 0.65
CKAP4-201ENST00000378026 KCNF1Q9H3M0 494 aa19.11■□□□□ 0.65
CKAP4-201ENST00000378026 TCHHQ07283 1943 aa19.11■□□□□ 0.65
CKAP4-201ENST00000378026 GTPBP4Q9BZE4 634 aaKnown RBP19.11■□□□□ 0.65
CKAP4-201ENST00000378026 SPTLC3Q9NUV7 552 aa19.11■□□□□ 0.65
CKAP4-201ENST00000378026 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
CKAP4-201ENST00000378026 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
CKAP4-201ENST00000378026 YTHDC2Q9H6S0 1430 aaKnown RBP19.1■□□□□ 0.65
CKAP4-201ENST00000378026 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
CKAP4-201ENST00000378026 KIAA1524Q8TCG1 905 aa19.09■□□□□ 0.65
CKAP4-201ENST00000378026 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
CKAP4-201ENST00000378026 ABCC3O15438 1527 aa19.08■□□□□ 0.65
CKAP4-201ENST00000378026 LRRCC1Q9C099 1032 aa19.08■□□□□ 0.65
CKAP4-201ENST00000378026 OSBPL3Q9H4L5 887 aa19.08■□□□□ 0.65
CKAP4-201ENST00000378026 RGS12O14924 1447 aa19.08■□□□□ 0.64
CKAP4-201ENST00000378026 IL1RAPL2Q9NP60 686 aa19.08■□□□□ 0.64
CKAP4-201ENST00000378026 CPA1P15085 419 aa19.07■□□□□ 0.64
CKAP4-201ENST00000378026 NECTIN2Q92692 538 aa19.07■□□□□ 0.64
CKAP4-201ENST00000378026 ZSCAN22P10073 491 aaPredicted RBP19.07■□□□□ 0.64
CKAP4-201ENST00000378026 UBE2HP62256 183 aa19.07■□□□□ 0.64
CKAP4-201ENST00000378026 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
CKAP4-201ENST00000378026 SYT1P21579 422 aa19.06■□□□□ 0.64
CKAP4-201ENST00000378026 PNMA6EA0A0J9YXQ4 647 aa19.06■□□□□ 0.64
CKAP4-201ENST00000378026 STX6O43752 255 aa19.06■□□□□ 0.64
CKAP4-201ENST00000378026 ZNF771Q7L3S4 317 aaPredicted RBP19.06■□□□□ 0.64
CKAP4-201ENST00000378026 RPAP1Q9BWH6 1393 aaPredicted RBP19.06■□□□□ 0.64
CKAP4-201ENST00000378026 PTGS1P23219 599 aa19.06■□□□□ 0.64
CKAP4-201ENST00000378026 ANAPC15P60006 121 aa19.06■□□□□ 0.64
CKAP4-201ENST00000378026 DNM1Q05193 864 aaKnown RBP19.06■□□□□ 0.64
CKAP4-201ENST00000378026 YEATS2Q9ULM3 1422 aa19.05■□□□□ 0.64
CKAP4-201ENST00000378026 LETM1O95202 739 aaPredicted RBP19.05■□□□□ 0.64
CKAP4-201ENST00000378026 KIF20AO95235 890 aa19.05■□□□□ 0.64
CKAP4-201ENST00000378026 NAA30Q147X3 362 aaPredicted RBP19.05■□□□□ 0.64
CKAP4-201ENST00000378026 CAMK4Q16566 473 aa19.05■□□□□ 0.64
CKAP4-201ENST00000378026 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
CKAP4-201ENST00000378026 C16orf45Q96MC5 204 aaPredicted RBP19.05■□□□□ 0.64
CKAP4-201ENST00000378026 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
CKAP4-201ENST00000378026 GNAI2P04899 355 aa19.04■□□□□ 0.64
CKAP4-201ENST00000378026 DRC7Q8IY82 874 aa19.04■□□□□ 0.64
CKAP4-201ENST00000378026 SMC3Q9UQE7 1217 aa19.04■□□□□ 0.64
CKAP4-201ENST00000378026 SOX12O15370 315 aa19.04■□□□□ 0.64
CKAP4-201ENST00000378026 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
CKAP4-201ENST00000378026 PTPRCP08575 1304 aa19.03■□□□□ 0.64
CKAP4-201ENST00000378026 AK2P54819 239 aa19.03■□□□□ 0.64
CKAP4-201ENST00000378026 LMTK2Q8IWU2 1503 aa19.03■□□□□ 0.64
CKAP4-201ENST00000378026 F13A1P00488 732 aa19.03■□□□□ 0.64
CKAP4-201ENST00000378026 LRMPQ12912 555 aa19.03■□□□□ 0.64
CKAP4-201ENST00000378026 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
CKAP4-201ENST00000378026 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
CKAP4-201ENST00000378026 KIDINS220Q9ULH0 1771 aa19.02■□□□□ 0.64
CKAP4-201ENST00000378026 CHL1O00533 1208 aa19.02■□□□□ 0.64
CKAP4-201ENST00000378026 CCDC83Q8IWF9 413 aa19.02■□□□□ 0.63
CKAP4-201ENST00000378026 COG3Q96JB2 828 aa19.02■□□□□ 0.63
CKAP4-201ENST00000378026 CGNQ9P2M7 1197 aaKnown RBP19.02■□□□□ 0.63
CKAP4-201ENST00000378026 NEXMIFQ5QGS0 1516 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 PTPRMP28827 1452 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 HAP1P54257 671 aaPredicted RBP19.01■□□□□ 0.63
CKAP4-201ENST00000378026 TMEM87AQ8NBN3 555 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 ANKRD7Q92527 254 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 ARAP3Q8WWN8 1544 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 ANKRD26Q9UPS8 1709 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 GOLGA6L6A8MZA4 724 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 LUZP1Q86V48 1076 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 FUCA2Q9BTY2 467 aa19.01■□□□□ 0.63
CKAP4-201ENST00000378026 LARGE1O95461 756 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 CCDC186Q7Z3E2 898 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 RASEFQ8IZ41 740 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 HSPA4P34932 840 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 RUFY3Q7L099 469 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 SALL3Q9BXA9 1300 aa19■□□□□ 0.63
CKAP4-201ENST00000378026 NCBP1Q09161 790 aaKnown RBP18.99■□□□□ 0.63
CKAP4-201ENST00000378026 CKAP2LQ8IYA6 745 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 FAM173BQ6P4H8 233 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 ABCA9Q8IUA7 1624 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 FERMT3Q86UX7 667 aa18.99■□□□□ 0.63
CKAP4-201ENST00000378026 BBXQ8WY36 941 aaPredicted RBP18.99■□□□□ 0.63
CKAP4-201ENST00000378026 DLG5Q8TDM6 1919 aa18.98■□□□□ 0.63
CKAP4-201ENST00000378026 FOXO3O43524 673 aa18.98■□□□□ 0.63
CKAP4-201ENST00000378026 CCDC192P0DO97 292 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms