RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 QTRT2Q9H974 415 aaKnown RBP16.82■□□□□ 0.28
KRT40-201ENST00000377755 SLC52A2Q9HAB3 445 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 TNS2Q63HR2 1409 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
KRT40-201ENST00000377755 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 GLI3P10071 1580 aa16.81■□□□□ 0.28
KRT40-201ENST00000377755 KCNQ3O43525 872 aa16.8■□□□□ 0.28
KRT40-201ENST00000377755 VAMP4O75379 141 aa16.8■□□□□ 0.28
KRT40-201ENST00000377755 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
KRT40-201ENST00000377755 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
KRT40-201ENST00000377755 BCAR3O75815 825 aa16.79■□□□□ 0.28
KRT40-201ENST00000377755 CT47B1P0C2W7 299 aaPredicted RBP16.79■□□□□ 0.28
KRT40-201ENST00000377755 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
KRT40-201ENST00000377755 CABP4P57796 275 aa16.79■□□□□ 0.28
KRT40-201ENST00000377755 TWISTNBQ3B726 338 aaPredicted RBP16.79■□□□□ 0.28
KRT40-201ENST00000377755 MRC1P22897 1456 aa16.78■□□□□ 0.28
KRT40-201ENST00000377755 A0A0G2JS52 829 aa16.78■□□□□ 0.28
KRT40-201ENST00000377755 ERVV-2B6SEH9 535 aa16.78■□□□□ 0.28
KRT40-201ENST00000377755 MYT1Q01538 1121 aa16.78■□□□□ 0.28
KRT40-201ENST00000377755 RNF123Q5XPI4 1314 aa16.78■□□□□ 0.28
KRT40-201ENST00000377755 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
KRT40-201ENST00000377755 SLC39A6Q13433 755 aa16.77■□□□□ 0.28
KRT40-201ENST00000377755 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.27
KRT40-201ENST00000377755 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
KRT40-201ENST00000377755 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
KRT40-201ENST00000377755 EIF4A1P60842 406 aaKnown RBP16.76■□□□□ 0.27
KRT40-201ENST00000377755 FKBP8Q14318 412 aa16.76■□□□□ 0.27
KRT40-201ENST00000377755 ZNF772Q68DY9 489 aaPredicted RBP16.76■□□□□ 0.27
KRT40-201ENST00000377755 THSD7AQ9UPZ6 1657 aa16.76■□□□□ 0.27
KRT40-201ENST00000377755 PLIN1O60240 522 aa16.75■□□□□ 0.27
KRT40-201ENST00000377755 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
KRT40-201ENST00000377755 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
KRT40-201ENST00000377755 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
KRT40-201ENST00000377755 TCERG1O14776 1098 aaKnown RBP16.73■□□□□ 0.27
KRT40-201ENST00000377755 IRX6P78412 446 aaPredicted RBP16.73■□□□□ 0.27
KRT40-201ENST00000377755 SEPT12Q8IYM1 358 aa16.73■□□□□ 0.27
KRT40-201ENST00000377755 PIGBQ92521 554 aa16.73■□□□□ 0.27
KRT40-201ENST00000377755 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
KRT40-201ENST00000377755 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
KRT40-201ENST00000377755 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
KRT40-201ENST00000377755 ALDH1L2Q3SY69 923 aa16.72■□□□□ 0.27
KRT40-201ENST00000377755 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
KRT40-201ENST00000377755 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
KRT40-201ENST00000377755 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
KRT40-201ENST00000377755 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
KRT40-201ENST00000377755 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
KRT40-201ENST00000377755 RBM6P78332 1123 aaKnown RBP16.7■□□□□ 0.26
KRT40-201ENST00000377755 FAM182BQ5T319 152 aa16.7■□□□□ 0.26
KRT40-201ENST00000377755 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
KRT40-201ENST00000377755 ZNF496Q96IT1 587 aaPredicted RBP16.7■□□□□ 0.26
KRT40-201ENST00000377755 ITGB4P16144 1822 aa16.7■□□□□ 0.26
KRT40-201ENST00000377755 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
KRT40-201ENST00000377755 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
KRT40-201ENST00000377755 KAT6BQ8WYB5 2073 aa16.69■□□□□ 0.26
KRT40-201ENST00000377755 MRPL50Q8N5N7 158 aaKnown RBP16.69■□□□□ 0.26
KRT40-201ENST00000377755 FRAT1Q92837 279 aaPredicted RBP16.69■□□□□ 0.26
KRT40-201ENST00000377755 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
KRT40-201ENST00000377755 BCL9O00512 1426 aa16.69■□□□□ 0.26
KRT40-201ENST00000377755 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
KRT40-201ENST00000377755 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
KRT40-201ENST00000377755 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
KRT40-201ENST00000377755 KCNQ2O43526 872 aa16.68■□□□□ 0.26
KRT40-201ENST00000377755 C20orf194Q5TEA3 1177 aa16.68■□□□□ 0.26
KRT40-201ENST00000377755 ERICH6BQ5W0A0 696 aa16.68■□□□□ 0.26
KRT40-201ENST00000377755 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
KRT40-201ENST00000377755 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
KRT40-201ENST00000377755 ATG3Q9NT62 314 aa16.68■□□□□ 0.26
KRT40-201ENST00000377755 HOXB7P09629 217 aa16.67■□□□□ 0.26
KRT40-201ENST00000377755 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
KRT40-201ENST00000377755 NOB1Q9ULX3 412 aaKnown RBP16.67■□□□□ 0.26
KRT40-201ENST00000377755 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
KRT40-201ENST00000377755 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
KRT40-201ENST00000377755 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
KRT40-201ENST00000377755 HDGFL1Q5TGJ6 251 aa16.66■□□□□ 0.26
KRT40-201ENST00000377755 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
KRT40-201ENST00000377755 RXRBP28702 533 aa16.66■□□□□ 0.26
KRT40-201ENST00000377755 CCDC30Q5VVM6 783 aa16.66■□□□□ 0.26
KRT40-201ENST00000377755 TNNQ9UQP3 1299 aa16.66■□□□□ 0.26
KRT40-201ENST00000377755 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
KRT40-201ENST00000377755 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
KRT40-201ENST00000377755 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
KRT40-201ENST00000377755 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
KRT40-201ENST00000377755 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
KRT40-201ENST00000377755 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
KRT40-201ENST00000377755 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
KRT40-201ENST00000377755 UBR2Q8IWV8 1755 aa16.64■□□□□ 0.25
KRT40-201ENST00000377755 ZKSCAN2Q63HK3 967 aa16.63■□□□□ 0.25
KRT40-201ENST00000377755 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
KRT40-201ENST00000377755 KIF16BQ96L93 1317 aa16.63■□□□□ 0.25
KRT40-201ENST00000377755 BRWD3Q6RI45 1802 aa16.63■□□□□ 0.25
KRT40-201ENST00000377755 STK31Q9BXU1 1019 aa16.63■□□□□ 0.25
KRT40-201ENST00000377755 C5P01031 1676 aa16.62■□□□□ 0.25
KRT40-201ENST00000377755 TRIM27P14373 513 aa16.62■□□□□ 0.25
KRT40-201ENST00000377755 G2E3Q7L622 706 aa16.62■□□□□ 0.25
KRT40-201ENST00000377755 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
KRT40-201ENST00000377755 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
KRT40-201ENST00000377755 PANK1Q8TE04 598 aa16.61■□□□□ 0.25
KRT40-201ENST00000377755 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
KRT40-201ENST00000377755 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms