RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 ATP8B2P98198 1209 aa14.49□□□□□ -0.09
TNFRSF9-201ENST00000377507 PXDNLA1KZ92 1463 aa14.49□□□□□ -0.09
TNFRSF9-201ENST00000377507 N4BP2Q86UW6 1770 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF9-201ENST00000377507 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
TNFRSF9-201ENST00000377507 GZF1Q9H116 711 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF9-201ENST00000377507 MRE11P49959 708 aa14.47□□□□□ -0.09
TNFRSF9-201ENST00000377507 CEMIPQ8WUJ3 1361 aa14.47□□□□□ -0.09
TNFRSF9-201ENST00000377507 ERC2O15083 957 aa14.47□□□□□ -0.09
TNFRSF9-201ENST00000377507 APBB1O00213 710 aa14.46□□□□□ -0.09
TNFRSF9-201ENST00000377507 CYP2E1P05181 493 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF9-201ENST00000377507 FKBP5Q13451 457 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF9-201ENST00000377507 IBTKQ9P2D0 1353 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF9-201ENST00000377507 LRRCC1Q9C099 1032 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 STAP2Q9UGK3 403 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 TUBGCP6Q96RT7 1819 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 SSFA2P28290 1259 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 NUTM2GQ5VZR2 741 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 IP6K1Q92551 441 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 USP44Q9H0E7 712 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 CWC22Q9HCG8 908 aaKnown RBP14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
TNFRSF9-201ENST00000377507 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF9-201ENST00000377507 PNMA6EA0A0J9YXQ4 647 aa14.44□□□□□ -0.1
TNFRSF9-201ENST00000377507 NUCB2P80303 420 aa14.44□□□□□ -0.1
TNFRSF9-201ENST00000377507 PHF8Q9UPP1 1060 aa14.44□□□□□ -0.1
TNFRSF9-201ENST00000377507 EXOC6BQ9Y2D4 811 aa14.44□□□□□ -0.1
TNFRSF9-201ENST00000377507 NFAT5O94916 1531 aa14.44□□□□□ -0.1
TNFRSF9-201ENST00000377507 ST18O60284 1047 aa14.43□□□□□ -0.1
TNFRSF9-201ENST00000377507 IL17RAQ96F46 866 aa14.43□□□□□ -0.1
TNFRSF9-201ENST00000377507 BAG4O95429 457 aaKnown RBP14.43□□□□□ -0.1
TNFRSF9-201ENST00000377507 HOXB7P09629 217 aa14.43□□□□□ -0.1
TNFRSF9-201ENST00000377507 SRCIN1Q9C0H9 1055 aa14.43□□□□□ -0.1
TNFRSF9-201ENST00000377507 GRPEL1Q9HAV7 217 aa14.43□□□□□ -0.1
TNFRSF9-201ENST00000377507 CHD2O14647 1828 aaKnown RBP14.42□□□□□ -0.1
TNFRSF9-201ENST00000377507 MX1P20591 662 aa14.42□□□□□ -0.1
TNFRSF9-201ENST00000377507 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
TNFRSF9-201ENST00000377507 SSH3Q8TE77 659 aa14.42□□□□□ -0.1
TNFRSF9-201ENST00000377507 AOX1Q06278 1338 aa14.42□□□□□ -0.1
TNFRSF9-201ENST00000377507 PHRF1Q9P1Y6 1649 aaKnown RBP14.42□□□□□ -0.1
TNFRSF9-201ENST00000377507 PANK2Q9BZ23 570 aa14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 LRRFIP2Q9Y608 721 aaKnown RBP14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 LTN1O94822 1766 aa14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 GOLGA6L22H0YM25 854 aa14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 HDGFL1Q5TGJ6 251 aa14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 LTV1Q96GA3 475 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 ESYT1Q9BSJ8 1104 aa14.41□□□□□ -0.1
TNFRSF9-201ENST00000377507 EPB41L2O43491 1005 aaKnown RBP14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 EIF4A1P60842 406 aaKnown RBP14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 POLA2Q14181 598 aa14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 KLHL40Q2TBA0 621 aa14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 CHMP4AQ9BY43 222 aa14.4□□□□□ -0.1
TNFRSF9-201ENST00000377507 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 UBTFL1P0CB47 393 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 CHMLP26374 656 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 ANAPC15P60006 121 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 GAS2L3Q86XJ1 694 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 KCNH5Q8NCM2 988 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 RAB11FIP3O75154 756 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 USHBP1Q8N6Y0 703 aa14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
TNFRSF9-201ENST00000377507 KDM3BQ7LBC6 1761 aa14.38□□□□□ -0.11
TNFRSF9-201ENST00000377507 ANKLE2Q86XL3 938 aa14.38□□□□□ -0.11
TNFRSF9-201ENST00000377507 RRAGDQ9NQL2 400 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF9-201ENST00000377507 NCAPD2Q15021 1401 aa14.38□□□□□ -0.11
TNFRSF9-201ENST00000377507 MCM2P49736 904 aa14.37□□□□□ -0.11
TNFRSF9-201ENST00000377507 LGR6Q9HBX8 967 aa14.37□□□□□ -0.11
TNFRSF9-201ENST00000377507 LMO7Q8WWI1 1683 aa14.37□□□□□ -0.11
TNFRSF9-201ENST00000377507 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
TNFRSF9-201ENST00000377507 ZDHHC9Q9Y397 364 aa14.37□□□□□ -0.11
TNFRSF9-201ENST00000377507 AKAP4Q5JQC9 854 aa14.36□□□□□ -0.11
TNFRSF9-201ENST00000377507 BEND3Q5T5X7 828 aa14.36□□□□□ -0.11
TNFRSF9-201ENST00000377507 ZGPATQ8N5A5 531 aaKnown RBP14.36□□□□□ -0.11
TNFRSF9-201ENST00000377507 PKP1Q13835 747 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 PPP1R42Q7Z4L9 355 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 ARXQ96QS3 562 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 LMBRD1Q9NUN5 540 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 OVOS2A0A0G2JMS6 1433 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 PSME1Q06323 249 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 CUL4AQ13619 759 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
TNFRSF9-201ENST00000377507 MCCP23508 829 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 NEK4P51957 841 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 AMOTQ4VCS5 1084 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 UNC5CLQ8IV45 518 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 DNAAF4Q8WXU2 420 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 TMX3Q96JJ7 454 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 SLIT3O75094 1523 aa14.34□□□□□ -0.11
TNFRSF9-201ENST00000377507 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 ZNF445P59923 1031 aa14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 PLEKHO1Q53GL0 409 aaPredicted RBP14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 ARHGEF25Q86VW2 580 aa14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 RHPN1Q8TCX5 695 aa14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 INTS4Q96HW7 963 aaKnown RBP14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms