RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
UBA1-202ENST00000377269 MCM4P33991 863 aa18.37■□□□□ 0.53
UBA1-202ENST00000377269 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
UBA1-202ENST00000377269 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
UBA1-202ENST00000377269 SPATA31A6Q5VVP1 1343 aa18.36■□□□□ 0.53
UBA1-202ENST00000377269 CYP27B1O15528 508 aa18.35■□□□□ 0.53
UBA1-202ENST00000377269 AKAP4Q5JQC9 854 aa18.35■□□□□ 0.53
UBA1-202ENST00000377269 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
UBA1-202ENST00000377269 IL2RBP14784 551 aa18.35■□□□□ 0.53
UBA1-202ENST00000377269 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
UBA1-202ENST00000377269 IGHDP01880 384 aa18.34■□□□□ 0.53
UBA1-202ENST00000377269 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
UBA1-202ENST00000377269 ESPNB1AK53 854 aa18.34■□□□□ 0.53
UBA1-202ENST00000377269 GNAI1P63096 354 aa18.34■□□□□ 0.53
UBA1-202ENST00000377269 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.53
UBA1-202ENST00000377269 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.53
UBA1-202ENST00000377269 ISY1Q9ULR0 285 aaKnown RBP18.33■□□□□ 0.53
UBA1-202ENST00000377269 SPG7Q9UQ90 795 aa18.33■□□□□ 0.53
UBA1-202ENST00000377269 SLIT2O94813 1529 aa18.33■□□□□ 0.52
UBA1-202ENST00000377269 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
UBA1-202ENST00000377269 PHKG2P15735 406 aa18.33■□□□□ 0.52
UBA1-202ENST00000377269 KRT24Q2M2I5 525 aa18.33■□□□□ 0.52
UBA1-202ENST00000377269 TBC1D32Q96NH3 1257 aa18.33■□□□□ 0.52
UBA1-202ENST00000377269 OVOS2A0A0G2JMS6 1433 aa18.33■□□□□ 0.52
UBA1-202ENST00000377269 CHL1O00533 1208 aa18.32■□□□□ 0.52
UBA1-202ENST00000377269 TPM2P07951 284 aa18.32■□□□□ 0.52
UBA1-202ENST00000377269 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
UBA1-202ENST00000377269 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
UBA1-202ENST00000377269 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
UBA1-202ENST00000377269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.522e-8■■□□□ 12.1
UBA1-202ENST00000377269 BCAR3O75815 825 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
UBA1-202ENST00000377269 ARXQ96QS3 562 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 RNMTO43148 476 aaKnown RBP18.31■□□□□ 0.52
UBA1-202ENST00000377269 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 BCL2L13Q9BXK5 485 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 PDCL3Q9H2J4 239 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
UBA1-202ENST00000377269 MEX3CQ5U5Q3 659 aaKnown RBP18.3■□□□□ 0.52
UBA1-202ENST00000377269 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
UBA1-202ENST00000377269 SPATA31A1Q5TZJ5 1347 aa18.3■□□□□ 0.52
UBA1-202ENST00000377269 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
UBA1-202ENST00000377269 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
UBA1-202ENST00000377269 TRAK2O60296 914 aa18.29■□□□□ 0.52
UBA1-202ENST00000377269 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
UBA1-202ENST00000377269 GZF1Q9H116 711 aaPredicted RBP18.29■□□□□ 0.52
UBA1-202ENST00000377269 UPF2Q9HAU5 1272 aaKnown RBP18.29■□□□□ 0.52
UBA1-202ENST00000377269 ERBB4Q15303 1308 aa18.29■□□□□ 0.52
UBA1-202ENST00000377269 GRPEL1Q9HAV7 217 aa18.28■□□□□ 0.52
UBA1-202ENST00000377269 USP21Q9UK80 565 aa18.28■□□□□ 0.52
UBA1-202ENST00000377269 SPATA31A5Q5VU36 1347 aa18.28■□□□□ 0.52
UBA1-202ENST00000377269 SPATA31A7Q8IWB4 1347 aa18.28■□□□□ 0.52
UBA1-202ENST00000377269 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
UBA1-202ENST00000377269 KDM6AO15550 1401 aaPredicted RBP18.28■□□□□ 0.52
UBA1-202ENST00000377269 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
UBA1-202ENST00000377269 KCNQ3O43525 872 aa18.27■□□□□ 0.51
UBA1-202ENST00000377269 TEFQ10587 303 aa18.27■□□□□ 0.51
UBA1-202ENST00000377269 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
UBA1-202ENST00000377269 CHMP5Q9NZZ3 219 aa18.26■□□□□ 0.51
UBA1-202ENST00000377269 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
UBA1-202ENST00000377269 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
UBA1-202ENST00000377269 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
UBA1-202ENST00000377269 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
UBA1-202ENST00000377269 AFF2P51816 1311 aa18.25■□□□□ 0.51
UBA1-202ENST00000377269 VAMP4O75379 141 aa18.25■□□□□ 0.51
UBA1-202ENST00000377269 NFATC2IPQ8NCF5 419 aa18.25■□□□□ 0.51
UBA1-202ENST00000377269 FAM98CQ17RN3 349 aaKnown RBP18.24■□□□□ 0.51
UBA1-202ENST00000377269 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
UBA1-202ENST00000377269 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
UBA1-202ENST00000377269 VPS72Q15906 364 aa18.24■□□□□ 0.51
UBA1-202ENST00000377269 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
UBA1-202ENST00000377269 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
UBA1-202ENST00000377269 SSH1Q8WYL5 1049 aa18.23■□□□□ 0.51
UBA1-202ENST00000377269 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
UBA1-202ENST00000377269 PKD1L3Q7Z443 1732 aa18.22■□□□□ 0.51
UBA1-202ENST00000377269 EXOC5O00471 708 aa18.22■□□□□ 0.51
UBA1-202ENST00000377269 PODXL2Q9NZ53 605 aa18.22■□□□□ 0.51
UBA1-202ENST00000377269 PLEKHG2Q9H7P9 1386 aa18.22■□□□□ 0.51
UBA1-202ENST00000377269 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
UBA1-202ENST00000377269 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
UBA1-202ENST00000377269 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
UBA1-202ENST00000377269 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
UBA1-202ENST00000377269 NWD2Q9ULI1 1742 aa18.21■□□□□ 0.51
UBA1-202ENST00000377269 DDX11L8A8MPP1 907 aa18.21■□□□□ 0.51
UBA1-202ENST00000377269 SMC4Q9NTJ3 1288 aa18.2■□□□□ 0.5
UBA1-202ENST00000377269 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
UBA1-202ENST00000377269 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
UBA1-202ENST00000377269 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
UBA1-202ENST00000377269 DDB1Q16531 1140 aa18.2■□□□□ 0.5
UBA1-202ENST00000377269 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
UBA1-202ENST00000377269 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
UBA1-202ENST00000377269 BARGINQ6ZT62 677 aa18.19■□□□□ 0.5
UBA1-202ENST00000377269 CABP4P57796 275 aa18.18■□□□□ 0.5
UBA1-202ENST00000377269 AAMPQ13685 434 aa18.18■□□□□ 0.5
UBA1-202ENST00000377269 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
UBA1-202ENST00000377269 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
UBA1-202ENST00000377269 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
UBA1-202ENST00000377269 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms